BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003989
         (1755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding prot...   409   0.0  
emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]   404   0.0  
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   399   0.0  
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              398   0.0  
gb|ACI43571.1| RBP50 [Cucurbita maxima]                               382   0.0  

>ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           isoform 1 [Vitis vinifera]
          Length = 448

 Score =  409 bits (1051), Expect(2) = 0.0
 Identities = 207/236 (87%), Positives = 218/236 (92%), Gaps = 1/236 (0%)
 Frame = +3

Query: 93  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 272
           MTEPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 273 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 452
           Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 453 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 632
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 633 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGAR-VAFPQ 797
           NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGD G +Y LQP GAR VAFPQ
Sbjct: 180 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQ 235



 Score =  337 bits (865), Expect(2) = 0.0
 Identities = 166/213 (77%), Positives = 181/213 (84%)
 Frame = +1

Query: 868  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 1047
            MGN       F GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLLR
Sbjct: 236  MGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLR 295

Query: 1048 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1227
            +KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNRF
Sbjct: 296  SKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRF 355

Query: 1228 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1407
            NRNA+KNYRYCCSPTKMIH+S+LPQD            HGSIVNTKLFE N KKQAL+LF
Sbjct: 356  NRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLF 415

Query: 1408 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 1506
            ETEEQATEALVCKHA+ ID S IRISFSQLQ+I
Sbjct: 416  ETEEQATEALVCKHASLIDGSTIRISFSQLQAI 448


>emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
          Length = 476

 Score =  404 bits (1037), Expect(2) = 0.0
 Identities = 202/230 (87%), Positives = 213/230 (92%)
 Frame = +3

Query: 93  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 272
           MTEPSKVIH+RNVG EISENDLLQLV  FGVVTKLVMLRAKNQALLQM D+ SAVSA+QY
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 273 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 452
           Y +VQPSVRGRNVY+QFSSHQELTTMDQN+ GR G DQD QPNRILLVTIHHLLYPITVE
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKG-DQDAQPNRILLVTIHHLLYPITVE 119

Query: 453 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 632
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV+A  +LQGRNIYDGCCQLDIQFS
Sbjct: 120 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFS 179

Query: 633 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGAR 782
           NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGD G +Y LQP GAR
Sbjct: 180 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGAR 229



 Score =  337 bits (865), Expect(2) = 0.0
 Identities = 166/213 (77%), Positives = 181/213 (84%)
 Frame = +1

Query: 868  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 1047
            MGN       F GGLPPGISGTN++CTVLVSNLN D IDEDKLFNLFS+YGNIVR+KLLR
Sbjct: 264  MGNATAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLR 323

Query: 1048 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1227
            +KPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT   DTH+Y NSNLNRF
Sbjct: 324  SKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRF 383

Query: 1228 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1407
            NRNA+KNYRYCCSPTKMIH+S+LPQD            HGSIVNTKLFE N KKQAL+LF
Sbjct: 384  NRNAAKNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLF 443

Query: 1408 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 1506
            ETEEQATEALVCKHA+ ID S IRISFSQLQ+I
Sbjct: 444  ETEEQATEALVCKHASLIDGSTIRISFSQLQAI 476


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  399 bits (1024), Expect(2) = 0.0
 Identities = 199/235 (84%), Positives = 212/235 (90%)
 Frame = +3

Query: 93  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 272
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 273 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 452
           YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE-VSPNRILLVTIHHLLYPITVE 117

Query: 453 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 632
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 118 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177

Query: 633 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGARVAFPQ 797
           NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGDAG +Y LQP    V FPQ
Sbjct: 178 NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 232



 Score =  333 bits (853), Expect(2) = 0.0
 Identities = 164/213 (76%), Positives = 180/213 (84%)
 Frame = +1

Query: 868  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 1047
            M N       F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLLR
Sbjct: 233  MPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLR 292

Query: 1048 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1227
            NKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNRF
Sbjct: 293  NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRF 352

Query: 1228 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1407
            NRNA+KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++F
Sbjct: 353  NRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMF 412

Query: 1408 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 1506
            E EEQATEALVCKHAT +    IRISFSQLQ I
Sbjct: 413  ENEEQATEALVCKHATPLGGLAIRISFSQLQGI 445


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  398 bits (1022), Expect(2) = 0.0
 Identities = 199/235 (84%), Positives = 212/235 (90%)
 Frame = +3

Query: 93  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 272
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQALLQM D+ SA +AMQ+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 273 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 452
           YT+VQPS+RGRNVY+QFSSHQELTT+DQN  GR  GD+   PNRILLVTIHHLLYPITVE
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGR--GDE---PNRILLVTIHHLLYPITVE 115

Query: 453 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 632
           VLHQVFSPHGFVEKIVTFQKSAGFQAL+QYQ+RQSAV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 116 VLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175

Query: 633 NLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYGDAGSLYPLQPAGARVAFPQ 797
           NL ELQVNYNNERSRDFTNPSLPSEQKGRSSQ GYGDAG +Y LQP    V FPQ
Sbjct: 176 NLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYALQPGARTVGFPQ 230



 Score =  333 bits (853), Expect(2) = 0.0
 Identities = 164/213 (76%), Positives = 180/213 (84%)
 Frame = +1

Query: 868  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 1047
            M N       F GGLPPGISGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNIVR+KLLR
Sbjct: 231  MPNASAIAAAFGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLR 290

Query: 1048 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1227
            NKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSK+ +IT GADTHEY+NS+LNRF
Sbjct: 291  NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYSNITTGADTHEYMNSSLNRF 350

Query: 1228 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1407
            NRNA+KNYRYCCSPTKMIH+S+L QD            HG+IVNTKLFE+N KKQAL++F
Sbjct: 351  NRNAAKNYRYCCSPTKMIHVSTLNQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMF 410

Query: 1408 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 1506
            E EEQATEALVCKHAT +    IRISFSQLQ I
Sbjct: 411  ENEEQATEALVCKHATPLGGLAIRISFSQLQGI 443


>gb|ACI43571.1| RBP50 [Cucurbita maxima]
          Length = 445

 Score =  382 bits (980), Expect(2) = 0.0
 Identities = 193/237 (81%), Positives = 212/237 (89%), Gaps = 2/237 (0%)
 Frame = +3

Query: 93  MTEPSKVIHIRNVGHEISENDLLQLVQSFGVVTKLVMLRAKNQALLQMHDLNSAVSAMQY 272
           MTEPSKVIH+RNVGHEISENDLLQL Q FGV+TKLVMLRAKNQAL+QM D+ SAV+A+Q+
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDVPSAVNALQF 60

Query: 273 YTSVQPSVRGRNVYIQFSSHQELTTMDQNTPGRNGGDQDTQPNRILLVTIHHLLYPITVE 452
           + +VQPS+RGRNVY+QFSSHQELTT DQN  GR  GD+   PNRILLVTIHH+LYPITVE
Sbjct: 61  FANVQPSIRGRNVYVQFSSHQELTTADQNAQGR--GDE---PNRILLVTIHHMLYPITVE 115

Query: 453 VLHQVFSPHGFVEKIVTFQKSAGFQALVQYQTRQSAVTARTSLQGRNIYDGCCQLDIQFS 632
           VLHQVF PHGFVEKIVTFQKSAGFQAL+QYQTRQ A++ART+LQGRNIYDGCCQLDIQFS
Sbjct: 116 VLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYDGCCQLDIQFS 175

Query: 633 NLTELQVNYNNERSRDFTNPSLPSEQKGR-SSQPGYGDAGSLYPLQPAGA-RVAFPQ 797
           NL ELQVNYNNERSRDFTNPSLPSE KGR S QPGYGDAG +Y LQ +GA  V FPQ
Sbjct: 176 NLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFPQ 232



 Score =  339 bits (870), Expect(2) = 0.0
 Identities = 165/213 (77%), Positives = 182/213 (85%)
 Frame = +1

Query: 868  MGNXXXXXXXFSGGLPPGISGTNEKCTVLVSNLNEDRIDEDKLFNLFSIYGNIVRVKLLR 1047
            M N       F GGLPPG+SGTN++CTVLVSNLN DRIDEDKLFNLFSIYGNI R+KLLR
Sbjct: 233  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIARIKLLR 292

Query: 1048 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKKLEVNFSKHLSITAGADTHEYINSNLNRF 1227
            NKPDHALVQMGDGFQAELAVHFLKGAMLFGK+LEVNFSKH +IT GADTHEY NSNLNRF
Sbjct: 293  NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTHEYANSNLNRF 352

Query: 1228 NRNASKNYRYCCSPTKMIHLSSLPQDXXXXXXXXXXXXHGSIVNTKLFEVNAKKQALILF 1407
            NRNA+KNYRYCCSPTKMIH+SSL Q+            HG I+NTKLFE+N KKQALI+F
Sbjct: 353  NRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIVNLLEEHGPIINTKLFEMNGKKQALIMF 412

Query: 1408 ETEEQATEALVCKHATTIDRSVIRISFSQLQSI 1506
            +TEEQATEALVCKHA+++  S+IRISFSQLQSI
Sbjct: 413  DTEEQATEALVCKHASSLSGSIIRISFSQLQSI 445