BLASTX nr result

ID: Coptis25_contig00003980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003980
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|2...   183   2e-44
ref|XP_002523562.1| hypothetical protein RCOM_1407360 [Ricinus c...   176   4e-42
ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|2...   172   6e-41
ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01...   162   5e-38
emb|CBI32429.3| unnamed protein product [Vitis vinifera]              160   1e-37

>ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|222853633|gb|EEE91180.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  183 bits (465), Expect = 2e-44
 Identities = 96/209 (45%), Positives = 137/209 (65%)
 Frame = -2

Query: 627 KDPVASKTFSRKPPRCVPLPICNKGSSRSSSPSATCLDLALPTDQTGNVSEEVDSGVGEP 448
           K  +A K+  RK PR +PL I  K + +S  P  + L    P +Q+ N SEEV S V E 
Sbjct: 219 KQNIAGKSSKRKRPRSLPLAIVQKKNKKSGQPRPSVLQAGQPAEQSENDSEEVGSEVLEG 278

Query: 447 IKLLESIVELKELKHLDSFTIVVNGLVMDSDINKYVKAKYYELCCSQNAFLHDHLPKVIG 268
            KL    V  K++K  + F I+V+GL++DS++++ ++ KYY+LCCSQNAFLHD+L K + 
Sbjct: 279 FKLSLPAVHFKDIKSFEDFNILVDGLLLDSELSEDIRNKYYKLCCSQNAFLHDNLIKGVN 338

Query: 267 SKLVAGIISETVNIADAIAAGKLTTPHEEFSIWDRSLMAFEQLGMNVGFLRSRLQRLVRL 88
            KL+AGIISETVNIADA+ A  L T  +EF+ WD++L A E  GMNVGFLRS+L  L+ L
Sbjct: 339 LKLIAGIISETVNIADAMRACTLNTSRDEFATWDKALKASELFGMNVGFLRSKLGLLLSL 398

Query: 87  AYESKQAIDAKRCDQALIRQTQQQSPIFN 1
           A++S+ A   +R  +A  ++ + +  I N
Sbjct: 399 AFDSEGATKTRRYIEARFKRVRTEDEIRN 427


>ref|XP_002523562.1| hypothetical protein RCOM_1407360 [Ricinus communis]
           gi|223537124|gb|EEF38757.1| hypothetical protein
           RCOM_1407360 [Ricinus communis]
          Length = 529

 Score =  176 bits (445), Expect = 4e-42
 Identities = 95/206 (46%), Positives = 133/206 (64%)
 Frame = -2

Query: 618 VASKTFSRKPPRCVPLPICNKGSSRSSSPSATCLDLALPTDQTGNVSEEVDSGVGEPIKL 439
           VA  +  RK PR +PL +  K + +SS    +        +Q+ N SEEV S V E  KL
Sbjct: 283 VACTSAKRKRPRSLPLAVVQKNNKKSSRSRLSVPKTGQLAEQSENDSEEVGSEVLEGFKL 342

Query: 438 LESIVELKELKHLDSFTIVVNGLVMDSDINKYVKAKYYELCCSQNAFLHDHLPKVIGSKL 259
               V+ +++K  ++F I+V+GLV+DS++++ ++ KYY+LCCSQNAFLH+ L K I  KL
Sbjct: 343 SLPAVQFEDVKSFENFNILVDGLVLDSELSEDIRRKYYKLCCSQNAFLHESLIKGINFKL 402

Query: 258 VAGIISETVNIADAIAAGKLTTPHEEFSIWDRSLMAFEQLGMNVGFLRSRLQRLVRLAYE 79
           +AGIISETVNIADAI A  LTT  +EF  WD++L A EQ GM VGFLR+RL +LV LA++
Sbjct: 403 IAGIISETVNIADAIRASNLTTSSDEFDTWDKTLNASEQFGMKVGFLRARLSQLVSLAFD 462

Query: 78  SKQAIDAKRCDQALIRQTQQQSPIFN 1
           S+ A   +R  +A   +   +  I N
Sbjct: 463 SEGATKTRRYIEARTERVNTEDEIRN 488


>ref|XP_002307261.1| predicted protein [Populus trichocarpa] gi|222856710|gb|EEE94257.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  172 bits (435), Expect = 6e-41
 Identities = 91/203 (44%), Positives = 131/203 (64%)
 Frame = -2

Query: 615 ASKTFSRKPPRCVPLPICNKGSSRSSSPSATCLDLALPTDQTGNVSEEVDSGVGEPIKLL 436
           A K+  RK PR +P  +  K + +S     +      P +Q+ N SEEV S V E  KL 
Sbjct: 211 ACKSSKRKRPRSLPQAVVQKKNKKSGQLRLSVPQAGQPAEQSENDSEEVGSEVLEGFKLS 270

Query: 435 ESIVELKELKHLDSFTIVVNGLVMDSDINKYVKAKYYELCCSQNAFLHDHLPKVIGSKLV 256
              V  K++K  + F I+V+GLV+DS++++ ++ KYY+LCC+QNAFLHD+L K +  KL+
Sbjct: 271 LPAVHFKDIKSFEDFNILVDGLVLDSELSEDIRNKYYKLCCNQNAFLHDNLIKGVNFKLI 330

Query: 255 AGIISETVNIADAIAAGKLTTPHEEFSIWDRSLMAFEQLGMNVGFLRSRLQRLVRLAYES 76
           AGIISETVNIADA+ A  LTT  ++F+ WD++L A E  GMNVGFLR+RL RL+ LA++S
Sbjct: 331 AGIISETVNIADAMRACTLTTSRDKFATWDKALKASELFGMNVGFLRARLSRLLSLAFDS 390

Query: 75  KQAIDAKRCDQALIRQTQQQSPI 7
           + A   +R  +A   +   +  I
Sbjct: 391 EGATKTRRYLEARFERVLTEDEI 413


>ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis
           vinifera]
          Length = 463

 Score =  162 bits (410), Expect = 5e-38
 Identities = 82/173 (47%), Positives = 120/173 (69%)
 Frame = -2

Query: 573 LPICNKGSSRSSSPSATCLDLALPTDQTGNVSEEVDSGVGEPIKLLESIVELKELKHLDS 394
           LP   + +++  S S +  +L L   Q+ N S+   S V E I+  ES V+ KE+K +++
Sbjct: 237 LPNSPQENTKKESLSVSTTELGLAACQSENDSDGHGSEVLERIRFSESAVDFKEVKSMEA 296

Query: 393 FTIVVNGLVMDSDINKYVKAKYYELCCSQNAFLHDHLPKVIGSKLVAGIISETVNIADAI 214
           F+I+VNGL+++S+ +K+++ KYYELCCSQ  +LHDHL   +  KL AGIISETVNIADAI
Sbjct: 297 FSILVNGLIINSEFSKHLQTKYYELCCSQKTYLHDHLLDGLNYKLAAGIISETVNIADAI 356

Query: 213 AAGKLTTPHEEFSIWDRSLMAFEQLGMNVGFLRSRLQRLVRLAYESKQAIDAK 55
            A KLTT  + FSIW ++L AF++LGMNVGFLR+RL +L+   +   +  +A+
Sbjct: 357 RASKLTTSRDNFSIWSKTLKAFQELGMNVGFLRARLDQLMSFGFVENRKREAR 409


>emb|CBI32429.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/166 (48%), Positives = 117/166 (70%)
 Frame = -2

Query: 552 SSRSSSPSATCLDLALPTDQTGNVSEEVDSGVGEPIKLLESIVELKELKHLDSFTIVVNG 373
           +++  S S +  +L L   Q+ N S+   S V E I+  ES V+ KE+K +++F+I+VNG
Sbjct: 144 NTKKESLSVSTTELGLAACQSENDSDGHGSEVLERIRFSESAVDFKEVKSMEAFSILVNG 203

Query: 372 LVMDSDINKYVKAKYYELCCSQNAFLHDHLPKVIGSKLVAGIISETVNIADAIAAGKLTT 193
           L+++S+ +K+++ KYYELCCSQ  +LHDHL   +  KL AGIISETVNIADAI A KLTT
Sbjct: 204 LIINSEFSKHLQTKYYELCCSQKTYLHDHLLDGLNYKLAAGIISETVNIADAIRASKLTT 263

Query: 192 PHEEFSIWDRSLMAFEQLGMNVGFLRSRLQRLVRLAYESKQAIDAK 55
             + FSIW ++L AF++LGMNVGFLR+RL +L+   +   +  +A+
Sbjct: 264 SRDNFSIWSKTLKAFQELGMNVGFLRARLDQLMSFGFVENRKREAR 309


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