BLASTX nr result

ID: Coptis25_contig00003975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003975
         (2085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   283   2e-73
gb|ABB29919.1| unknown [Solanum tuberosum]                            258   3e-66
ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cuc...   225   3e-56
ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216...   225   3e-56
ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242...   222   3e-55

>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
            gi|302141951|emb|CBI19154.3| unnamed protein product
            [Vitis vinifera]
          Length = 257

 Score =  283 bits (723), Expect = 2e-73
 Identities = 159/259 (61%), Positives = 173/259 (66%), Gaps = 6/259 (2%)
 Frame = -2

Query: 2039 MSHFGRSGPPDIRDTYSLLVLNITFRTSSDDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 1860
            MSHFGRSGPPDIRDTYSLLVLNITFRT++DDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 1859 FVRYKYAHEAQKAVDKLDGRNVDGRDIMVQFAKYGPNAEKIHKGRIIEKFAKTRGRSRST 1680
            FVRYKYA EAQKAV+KLDGRNVDGR+IMVQFAKYGPNAE+IHKGRIIE  +K++GRSRS 
Sbjct: 61   FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIETSSKSKGRSRSR 120

Query: 1679 SPR-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSPDHHKXXXXXX 1515
            SPR                                           S SPDHHK      
Sbjct: 121  SPRPRHRDEYRDRDYRKRSRSRSRGRNDRDRYRGKERDSRRRSRSRSASPDHHK--DRGR 178

Query: 1514 XXXXXXXXXXXXXXXSASP-QLGLSPRKGPSPRVTPPYGGDSPDKCSRDERSPSPKSVSP 1338
                           SASP +   SPR  PSPR TPP   +SP    R+ERSP+PKSVSP
Sbjct: 179  GRYDDERRSRSRSYGSASPARRSPSPRGSPSPRRTPPSREESPVGRKRNERSPTPKSVSP 238

Query: 1337 RNRRADSRSPSPRNSDADD 1281
            R R ADSRSPSP NSDAD+
Sbjct: 239  RGRPADSRSPSPHNSDADE 257


>gb|ABB29919.1| unknown [Solanum tuberosum]
          Length = 258

 Score =  258 bits (660), Expect = 3e-66
 Identities = 145/260 (55%), Positives = 167/260 (64%), Gaps = 7/260 (2%)
 Frame = -2

Query: 2039 MSHFGRSGPPDIRDTYSLLVLNITFRTSSDDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 1860
            MSHFGRSGPPDI+DTYSLLVLN+TFRT++DDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 1859 FVRYKYAHEAQKAVDKLDGRNVDGRDIMVQFAKYGPNAEKIHKGRIIEKFAKTRGRSRST 1680
            FVRYKY  EAQKAV+KLDGR VDGR+IMV+FAKYGPNAE+I KGRI+E   +T+GRSRS 
Sbjct: 61   FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQRTKGRSRSR 120

Query: 1679 SPR------HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSPDHHKXXXXX 1518
            SPR                                            S SPD+HK     
Sbjct: 121  SPRPRHRDHRDKDSRRRSRSRSRSRSKGRYDRDQYRGRDRDNRHRSRSRSPDYHKGRGRG 180

Query: 1517 XXXXXXXXXXXXXXXXSASPQLGLSPRKGPSP-RVTPPYGGDSPDKCSRDERSPSPKSVS 1341
                            ++  +   SPR+ PSP R+TPP    SPD  +  +RSP+PKS+S
Sbjct: 181  KYDEDRRSRSRSHGRSASPARRSPSPRRSPSPRRITPPRDA-SPDGRNHKDRSPTPKSIS 239

Query: 1340 PRNRRADSRSPSPRNSDADD 1281
            PR RRA SRSP PR SDADD
Sbjct: 240  PRGRRAGSRSPLPR-SDADD 258


>ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
          Length = 251

 Score =  225 bits (574), Expect = 3e-56
 Identities = 107/123 (86%), Positives = 117/123 (95%)
 Frame = -2

Query: 2039 MSHFGRSGPPDIRDTYSLLVLNITFRTSSDDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 1860
            MSHFGRSGPPDIRDTYSLLVLNITFRT++DDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 1859 FVRYKYAHEAQKAVDKLDGRNVDGRDIMVQFAKYGPNAEKIHKGRIIEKFAKTRGRSRST 1680
            FVRYKYA EAQKA+DKLDGR +DGR+IMVQFAKYGPNAEKI KGR++E  +KTRGRSRS 
Sbjct: 61   FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120

Query: 1679 SPR 1671
            SPR
Sbjct: 121  SPR 123


>ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
          Length = 257

 Score =  225 bits (574), Expect = 3e-56
 Identities = 107/123 (86%), Positives = 117/123 (95%)
 Frame = -2

Query: 2039 MSHFGRSGPPDIRDTYSLLVLNITFRTSSDDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 1860
            MSHFGRSGPPDIRDTYSLLVLNITFRT++DDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 1859 FVRYKYAHEAQKAVDKLDGRNVDGRDIMVQFAKYGPNAEKIHKGRIIEKFAKTRGRSRST 1680
            FVRYKYA EAQKA+DKLDGR +DGR+IMVQFAKYGPNAEKI KGR++E  +KTRGRSRS 
Sbjct: 61   FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120

Query: 1679 SPR 1671
            SPR
Sbjct: 121  SPR 123


>ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
            gi|296086805|emb|CBI32954.3| unnamed protein product
            [Vitis vinifera]
          Length = 255

 Score =  222 bits (565), Expect = 3e-55
 Identities = 106/123 (86%), Positives = 116/123 (94%)
 Frame = -2

Query: 2039 MSHFGRSGPPDIRDTYSLLVLNITFRTSSDDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 1860
            MSHFGRSGPPDI+DT+SLLVLNITFRT++DDLFP FDKYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1    MSHFGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFA 60

Query: 1859 FVRYKYAHEAQKAVDKLDGRNVDGRDIMVQFAKYGPNAEKIHKGRIIEKFAKTRGRSRST 1680
            FVRYKYA EAQKAVD+LDGR VDGR+I VQFAKYGPNAE+IHKGRI+E F K+RGRSRS 
Sbjct: 61   FVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRIVETFPKSRGRSRSH 120

Query: 1679 SPR 1671
            SPR
Sbjct: 121  SPR 123


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