BLASTX nr result
ID: Coptis25_contig00003973
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003973 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2... 257 6e-67 emb|CBI18267.3| unnamed protein product [Vitis vinifera] 251 3e-65 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 251 3e-65 ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu... 251 4e-65 ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica... 249 1e-64 >ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1| predicted protein [Populus trichocarpa] Length = 1077 Score = 257 bits (657), Expect = 6e-67 Identities = 120/134 (89%), Positives = 130/134 (97%) Frame = +3 Query: 3 IPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLMPRKRKNQITTLVED 182 IPGFTYPVR+ FLEDVLEMTGYKLTSFNQIDDYGQEK+WKTQ+QL+PRKRKNQITTLVED Sbjct: 355 IPGFTYPVRTQFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQRQLVPRKRKNQITTLVED 414 Query: 183 ALNKSNFENYSSRARDSLSCWTPESIGFNLIEAVLCHICRKERQGAVLVFITGWDDISSL 362 ALNKS+FENYSSRARDSL+CW P+ IGFNLIEAVLCHICRKER GAVLVF+TGW+DISSL Sbjct: 415 ALNKSSFENYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISSL 474 Query: 363 RDQIKAHPLLGDPN 404 RDQ+KAHPLLGDPN Sbjct: 475 RDQLKAHPLLGDPN 488 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 251 bits (642), Expect = 3e-65 Identities = 117/134 (87%), Positives = 127/134 (94%) Frame = +3 Query: 3 IPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLMPRKRKNQITTLVED 182 IPGFTYPVR+HFLEDVLEMTGYKLTSFNQIDDYGQEK+WKTQKQL+PRKRKN+IT LVED Sbjct: 414 IPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLVPRKRKNKITALVED 473 Query: 183 ALNKSNFENYSSRARDSLSCWTPESIGFNLIEAVLCHICRKERQGAVLVFITGWDDISSL 362 AL KS+FENYSS RDSLSCWTP+ +GFNLIEAVLCHICRKER GAVLVF+TGW+DIS L Sbjct: 474 ALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCL 533 Query: 363 RDQIKAHPLLGDPN 404 RDQI+AHPLLGDPN Sbjct: 534 RDQIRAHPLLGDPN 547 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 251 bits (642), Expect = 3e-65 Identities = 117/134 (87%), Positives = 127/134 (94%) Frame = +3 Query: 3 IPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLMPRKRKNQITTLVED 182 IPGFTYPVR+HFLEDVLEMTGYKLTSFNQIDDYGQEK+WKTQKQL+PRKRKN+IT LVED Sbjct: 414 IPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLVPRKRKNKITALVED 473 Query: 183 ALNKSNFENYSSRARDSLSCWTPESIGFNLIEAVLCHICRKERQGAVLVFITGWDDISSL 362 AL KS+FENYSS RDSLSCWTP+ +GFNLIEAVLCHICRKER GAVLVF+TGW+DIS L Sbjct: 474 ALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCL 533 Query: 363 RDQIKAHPLLGDPN 404 RDQI+AHPLLGDPN Sbjct: 534 RDQIRAHPLLGDPN 547 >ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1129 Score = 251 bits (641), Expect = 4e-65 Identities = 116/134 (86%), Positives = 127/134 (94%) Frame = +3 Query: 3 IPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLMPRKRKNQITTLVED 182 IPGFTYPVR+HFLEDVLEMTGYKLTSFNQIDDYGQ+K+WKTQ+QL PRKRKNQI TLVED Sbjct: 408 IPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDKMWKTQRQLAPRKRKNQIATLVED 467 Query: 183 ALNKSNFENYSSRARDSLSCWTPESIGFNLIEAVLCHICRKERQGAVLVFITGWDDISSL 362 ALNKS+FE+YSSRARDSL+CW P+ IGFNLIEAVLCHICRKER G VLVF+TGW+DIS L Sbjct: 468 ALNKSSFESYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERPGGVLVFMTGWEDISCL 527 Query: 363 RDQIKAHPLLGDPN 404 RDQ+KAHPLLGDPN Sbjct: 528 RDQLKAHPLLGDPN 541 >ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] Length = 1161 Score = 249 bits (637), Expect = 1e-64 Identities = 116/134 (86%), Positives = 127/134 (94%) Frame = +3 Query: 3 IPGFTYPVRSHFLEDVLEMTGYKLTSFNQIDDYGQEKLWKTQKQLMPRKRKNQITTLVED 182 IPGFTYPVR+HFLED+LEMTGYKLTSFNQIDDYGQEKLWKTQKQL PRKRKNQIT LVED Sbjct: 439 IPGFTYPVRAHFLEDILEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQITALVED 498 Query: 183 ALNKSNFENYSSRARDSLSCWTPESIGFNLIEAVLCHICRKERQGAVLVFITGWDDISSL 362 AL+ S+FENYSSRARDSL+ W P+ IGFNLIEAVLCHICRKER GAVLVF+TGW+DISSL Sbjct: 499 ALSNSSFENYSSRARDSLTSWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISSL 558 Query: 363 RDQIKAHPLLGDPN 404 +DQ+KAHPL+GDPN Sbjct: 559 KDQLKAHPLVGDPN 572