BLASTX nr result
ID: Coptis25_contig00003963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003963
(1683 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis... 531 e-148
ref|XP_002520655.1| nucleic acid binding protein, putative [Rici... 496 e-138
gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris] 444 e-122
emb|CBI39492.3| unnamed protein product [Vitis vinifera] 440 e-121
ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis... 440 e-121
>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
Length = 570
Score = 531 bits (1367), Expect = e-148
Identities = 302/551 (54%), Positives = 367/551 (66%), Gaps = 24/551 (4%)
Frame = -1
Query: 1680 QLPSHVHGSNTGP--STATNSNGSTSXXXXXXXQ----VRKKRNLPGTPDPDAEVIALSP 1519
Q +H+HGS GP ST TNSNGS+S Q ++KKRNLPGTPDP+AEVIALSP
Sbjct: 28 QPQNHLHGSGLGPNSSTVTNSNGSSSSQQQQQQQQQQPIKKKRNLPGTPDPNAEVIALSP 87
Query: 1518 TTLMSRNRFVCEICNKGFARDQNLQLHRRGHNLPWKLRQRSTTDIRKRVYICPEPTCVHH 1339
TTLM+ NRFVCEICNKGF RDQNLQLHRRGHNLPWKLRQR+T +IRKRVYICPEP+CVHH
Sbjct: 88 TTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTNEIRKRVYICPEPSCVHH 147
Query: 1338 NPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXKYAVQSDWKAHSKTCGTREYKCDCGTIF 1159
NP+RALGDLTGIKKH+SRKHGE KYAVQSDWKAHSKTCGTREYKCDCGTIF
Sbjct: 148 NPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIF 207
Query: 1158 SRRDSFITHRAFCDALAEENNKINQGLMTSNMGGNVQDQV-----XXXXXXXXXXXXXXX 994
SRRDSFITHRAFCDALAEENNK+NQGLM +NMG N+Q Q+
Sbjct: 208 SRRDSFITHRAFCDALAEENNKVNQGLM-ANMGSNLQSQMPELMSSMPLNSNSSPSVGIS 266
Query: 993 XXPEFDLKNPMKTLSHELMPMPIRPLNMGQGMLSCSSGTLFGGPRNM-PXXXXXXXXXXX 817
+D KNP+K+L +L+PMP + NM GM S SSGTLFGGPR++
Sbjct: 267 EFNSYDPKNPLKSLPQDLVPMPFKSPNMSGGMFSSSSGTLFGGPRSISSSSSGLQLSSNS 326
Query: 816 XXSFNGLHD----QQLTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQ 649
FN L D QL+ SANMSATALLQKAAQMGATAS+++N+PMMQKS VSSM + +
Sbjct: 327 SSGFNYLQDGKNGTQLSGSANMSATALLQKAAQMGATASNSINSPMMQKSFVSSM-AAPE 385
Query: 648 LSGIRPISYGGGQMPHNNSYHNIQSQTDQLQLVGMD-GGFNRQYLPRGRQEM-PQHGNFN 475
LS IRP Y Q N+ H+ QSQ DQ LVG++ GG Q+L +G E+ P +
Sbjct: 386 LSSIRPSPYVTIQQQTNSYDHHFQSQPDQSPLVGINGGGLPSQFLQKGPPEITPLFQTVS 445
Query: 474 AAMGIDNSSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQG-----RSANSSLD 310
+ ++N D GM+ +++ G+Q+ +LKNME E++ T+S QG RSA
Sbjct: 446 GSASMNN----DIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVMARSATGPSR 501
Query: 309 IPTSGHGQDMMTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG-DPFQQQLS 133
+G G+D+ T+D LG+GGSR NL EA+SQ ++Q FQQQLS
Sbjct: 502 FGGNGEGKDVTTLDLLGVGGSRPVNL------QEQQQRLELEAMSQHRMQAMTTFQQQLS 555
Query: 132 YGHAVMEKPMW 100
+G +E+ ++
Sbjct: 556 HGEPAIEQGLY 566
>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540040|gb|EEF41617.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 631
Score = 496 bits (1277), Expect = e-138
Identities = 305/614 (49%), Positives = 371/614 (60%), Gaps = 86/614 (14%)
Frame = -1
Query: 1680 QLPSHVHGSN-TGPST-ATNSNGSTSXXXXXXXQVRKKRNLPGTP--------------- 1552
QL +H HGSN +GP++ ATNSNGSTS V+KKRNLPGTP
Sbjct: 29 QLQNHFHGSNLSGPNSGATNSNGSTSQQTA----VKKKRNLPGTPGNNNKTLETNEKGVL 84
Query: 1551 ----------DPDAEVIALSPTTLMSRNRFVCEICNKGFARDQNLQLHRRGHNLPWKLRQ 1402
DP+A+VIALSPTTLM+ NRFVCEICNKGF RDQNLQLHRRGHNLPWKLRQ
Sbjct: 85 DCSKRYEFSRDPNADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 144
Query: 1401 RSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXKYAVQSD 1222
R+TT+++KRVYICPEPTCVHHNP+RALGDLTGIKKHFSRKHGE KYAVQSD
Sbjct: 145 RTTTEVKKRVYICPEPTCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSD 204
Query: 1221 WKAHSKTCGTREYKCDCGTIFSR----------------------------RDSFITHRA 1126
WKAH KTCGTREYKCDCGTIFSR RDSFITHRA
Sbjct: 205 WKAHQKTCGTREYKCDCGTIFSRIYVPALVCNLALLSISLLTLLFNDQSCRRDSFITHRA 264
Query: 1125 FCDALAEENNKINQGLMTSNMGGNVQDQVXXXXXXXXXXXXXXXXXPE-FDLKNPMKTLS 949
FCDALAEENNK+NQGL S++ + + + FD KNP+K+L
Sbjct: 265 FCDALAEENNKVNQGLTGSHLQNQMPELMSSMPLTTNTNTSIGISDFNSFDPKNPLKSLP 324
Query: 948 HELMPMPIRPLNMGQGMLSCSSGTLFGGPRNMPXXXXXXXXXXXXXS-FNGLHDQ----Q 784
EL+PMP + +NM GM S SSGTLFGGPR++ S +N L D Q
Sbjct: 325 QELVPMPFKSMNMAGGMFSSSSGTLFGGPRSIASTSSSLQLSSNSSSGYNYLQDGKNGCQ 384
Query: 783 LTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQLSGI-----RPISYG 619
+++SA MSATALLQKAAQMGATAS+++N+PMMQKS SSM DQ+ I RP S+G
Sbjct: 385 ISSSAQMSATALLQKAAQMGATASNSINSPMMQKSFASSMACPDQIIPIRPQLPRPPSFG 444
Query: 618 GGQMPHNN--SYHNIQSQ--TDQLQLVGMDGGFNRQ---YLPRGRQEMPQHGNFNAAMGI 460
G Q HNN SY + S DQ LVG++GG Q L +G+QEM Q + ++ G
Sbjct: 445 GVQQ-HNNTTSYDHFPSSQLLDQTHLVGINGGGYNQPNGTLQKGQQEMSQFFDPTSSSG- 502
Query: 459 DNSSVTDTGMYSGMYMNGNQDHGYLKNMEQEN-----AVVTTSTLQGR-------SANSS 316
++D GM S M+M +Q+ G++KN+E N + TTS + GR ++ S
Sbjct: 503 ----MSDMGMLSTMFMGTDQNPGFMKNIEHSNNDHQDSGNTTSLIHGRAHSMERTASGPS 558
Query: 315 LDIPTSGHGQDMMTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKL-QGDPFQQQ 139
+ +G DMMT DF+G+GGSR ANL A+SQ ++ FQQQ
Sbjct: 559 RLVGHNGESSDMMTRDFMGIGGSRPANL--HEQQQQQQQRMEMGAMSQQRMPMMSHFQQQ 616
Query: 138 LSYGHAVMEKPMWD 97
LS G + MEKP+W+
Sbjct: 617 LSLGESAMEKPIWE 630
>gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris]
Length = 515
Score = 444 bits (1141), Expect = e-122
Identities = 252/491 (51%), Positives = 309/491 (62%), Gaps = 16/491 (3%)
Frame = -1
Query: 1665 VHGSNTGPSTATNSNGSTSXXXXXXXQVRKKRNLPGTP-------DPDAEVIALSPTTLM 1507
+H ++ GPS A NSN ST+ +KKRNLPGTP +P AEV+ALSPTTLM
Sbjct: 33 LHDTSPGPSAACNSNASTNQQ------AKKKRNLPGTPGKYSTKFNPSAEVVALSPTTLM 86
Query: 1506 SRNRFVCEICNKGFARDQNLQLHRRGHNLPWKLRQRSTTDIRKRVYICPEPTCVHHNPSR 1327
+ NRFVCEICNKGF RDQNLQLHRRGHNLPWKLRQR++T+++KRVY+CPEP+CVHHNP+R
Sbjct: 87 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSTEVKKRVYVCPEPSCVHHNPAR 146
Query: 1326 ALGDLTGIKKHFSRKHGEXXXXXXXXXXKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRD 1147
ALGDLTGIKKH+SRKHGE +YAVQSDWKAH KTCGTREYKCDCGTIFSRRD
Sbjct: 147 ALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRRD 206
Query: 1146 SFITHRAFCDALAEENNKINQGLMTSNMGGNVQDQVXXXXXXXXXXXXXXXXXPEFDLKN 967
SFITHRAFCDAL EENN++NQGL TS M N+Q Q+ +D KN
Sbjct: 207 SFITHRAFCDALTEENNRVNQGL-TSGMPPNLQSQI---PDLMSTMPLNTSPNTAYDPKN 262
Query: 966 PMKTLSHELMPMPIRPLNMGQGMLSCSSGTLFGGPRNM-PXXXXXXXXXXXXXSFNGLHD 790
P+K+L EL+P+P + ++MG GM S ++G LFGGP+ M P SFN L D
Sbjct: 263 PLKSLPQELVPIPFKSMSMGGGMFSTNAGALFGGPKTMPPSSSNLQLGSNTSSSFNYLQD 322
Query: 789 QQ----LTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQLSGIRPISY 622
+ + ASA MSATALLQKAAQMG V+ D +S RP Y
Sbjct: 323 NKSAGLIAASAQMSATALLQKAAQMG---------------FVTGTTAPDHVSSTRP-PY 366
Query: 621 GGGQMPHNNSYHNIQSQTDQLQLVGMDGG--FNRQYLPRGRQEMPQHGNFNAAMGIDNSS 448
G + HNNSY + Q D + G+ GG F Q +G QE+ Q + N A S+
Sbjct: 367 SGAMLQHNNSYEHFCPQPDLSNMAGVSGGGAFINQLFHKG-QEISQVFDTNTA----GSN 421
Query: 447 VTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDI-PTSGHGQDMMTV 271
+ D GM+S M + + + G +KN+EQE +S + GR + P+ G DM TV
Sbjct: 422 INDVGMFSQMPLGSDHNPGLMKNVEQE-VSNCSSLIHGRDVVEGNPMQPSRFGGSDMTTV 480
Query: 270 -DFLGMGGSRS 241
DFLG+GGS S
Sbjct: 481 HDFLGIGGSTS 491
>emb|CBI39492.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 440 bits (1131), Expect = e-121
Identities = 264/536 (49%), Positives = 316/536 (58%), Gaps = 10/536 (1%)
Frame = -1
Query: 1671 SHVHG--SNTGPSTATNSNGSTSXXXXXXXQVRKKRNLPGTPDPDAEVIALSPTTLMSRN 1498
+++HG S+ ST+ NSNGS S +KKRNLPG PDP AEVIALSPTTLM+ N
Sbjct: 28 NNLHGLSSSVPSSTSNNSNGSISQQQPPP--AKKKRNLPGNPDPSAEVIALSPTTLMATN 85
Query: 1497 RFVCEICNKGFARDQNLQLHRRGHNLPWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALG 1318
RFVCEICNKGF RDQNLQLHRRGHNLPWKLRQRS+T+IRKRVY+CPEP+CVHHNP+RALG
Sbjct: 86 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALG 145
Query: 1317 DLTGIKKHFSRKHGEXXXXXXXXXXKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI 1138
DLTGIKKHF RKHGE KYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI
Sbjct: 146 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI 205
Query: 1137 THRAFCDALAEENNKINQGLM-TSNMGGNVQDQV--XXXXXXXXXXXXXXXXXPEF---D 976
THRAFCDALAEEN K+NQGL T +Q QV EF D
Sbjct: 206 THRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEFTHSD 265
Query: 975 LKNPMKTLSHELMPMPIRPLNM-GQGMLSCSSGTLFGGPRNMPXXXXXXXXXXXXXSFNG 799
KN +KTL HE MP+P +PLNM GM S +SG+LFG P NG
Sbjct: 266 SKNHLKTLPHEPMPVPPKPLNMAAAGMFSTTSGSLFGCPITASFE-------------NG 312
Query: 798 LHDQQLTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQLSGIRPISYG 619
AS MSATALLQKAAQMGATAS+ +N K V+SM P +G
Sbjct: 313 QQLPPPPASTLMSATALLQKAAQMGATASTKMNN-SPPKGFVTSMA---------PTPFG 362
Query: 618 GGQMPHNNSYHNIQSQTDQLQLVGMDGGFNRQYLPRGRQEMPQHGNFNAAMGIDNSSVTD 439
G + N+S ++ Q D Q F Q+ F G ++ +++
Sbjct: 363 GILLQKNSSSNDHHLQADPTQ-------FLNQF-------------FYQNDGAESEVMSE 402
Query: 438 TGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDIPTSGHGQDMMTVDFLG 259
GM+SG++ +Q+HG KNME + + L ++ N L D MTVDFLG
Sbjct: 403 MGMFSGLF---DQNHGLFKNMEHHEHSNSNNILAAKTTNPGLSSTPRNGKTDTMTVDFLG 459
Query: 258 MGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG-DPFQQQLSYGHAVMEKPMWDA 94
+GG+R N I+ P++QG F+Q +++G A MEK MW+A
Sbjct: 460 IGGARPGNFHGQQQQQQEMFEGMN--INHPRMQGFSSFEQHIAHGQAAMEKTMWEA 513
>ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
Length = 531
Score = 440 bits (1131), Expect = e-121
Identities = 267/541 (49%), Positives = 322/541 (59%), Gaps = 15/541 (2%)
Frame = -1
Query: 1671 SHVHG--SNTGPSTATNSNGSTSXXXXXXXQVRKKRNLPGTPDPDAEVIALSPTTLMSRN 1498
+++HG S+ ST+ NSNGS S +KKRNLPG PDP AEVIALSPTTLM+ N
Sbjct: 28 NNLHGLSSSVPSSTSNNSNGSISQQQPPP--AKKKRNLPGNPDPSAEVIALSPTTLMATN 85
Query: 1497 RFVCEICNKGFARDQNLQLHRRGHNLPWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALG 1318
RFVCEICNKGF RDQNLQLHRRGHNLPWKLRQRS+T+IRKRVY+CPEP+CVHHNP+RALG
Sbjct: 86 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALG 145
Query: 1317 DLTGIKKHFSRKHGEXXXXXXXXXXKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI 1138
DLTGIKKHF RKHGE KYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI
Sbjct: 146 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFI 205
Query: 1137 THRAFCDALAEENNKINQGLM-TSNMGGNVQDQV--XXXXXXXXXXXXXXXXXPEF---D 976
THRAFCDALAEEN K+NQGL T +Q QV EF D
Sbjct: 206 THRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEFTHSD 265
Query: 975 LKNPMKTLSHELMPMPIRPLNM-GQGMLSCSSGTLFGGP--RNMPXXXXXXXXXXXXXSF 805
KN +KTL HE MP+P +PLNM GM S +SG+LFG P + P S
Sbjct: 266 SKNHLKTLPHEPMPVPPKPLNMAAAGMFSTTSGSLFGCPITASSPSSSSRLQLSTNSSSP 325
Query: 804 NGLHDQQL---TASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQLSGIR 634
+ + QQL AS MSATALLQKAAQMGATAS+ +N K V+SM
Sbjct: 326 SFENGQQLPPPPASTLMSATALLQKAAQMGATASTKMNN-SPPKGFVTSMA--------- 375
Query: 633 PISYGGGQMPHNNSYHNIQSQTDQLQLVGMDGGFNRQYLPRGRQEMPQHGNFNAAMGIDN 454
P +GG + N+S ++ Q D Q F Q+ F G ++
Sbjct: 376 PTPFGGILLQKNSSSNDHHLQADPTQ-------FLNQF-------------FYQNDGAES 415
Query: 453 SSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDIPTSGHGQDMMT 274
+++ GM+SG++ +Q+HG KNME + + L ++ N L D MT
Sbjct: 416 EVMSEMGMFSGLF---DQNHGLFKNMEHHEHSNSNNILAAKTTNPGLSSTPRNGKTDTMT 472
Query: 273 VDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG-DPFQQQLSYGHAVMEKPMWD 97
VDFLG+GG+R N I+ P++QG F+Q +++G A MEK MW+
Sbjct: 473 VDFLGIGGARPGNFHGQQQQQQEMFEGMN--INHPRMQGFSSFEQHIAHGQAAMEKTMWE 530
Query: 96 A 94
A
Sbjct: 531 A 531