BLASTX nr result
ID: Coptis25_contig00003958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003958
(1914 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15315.3| unnamed protein product [Vitis vinifera] 395 e-107
ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|2... 392 e-106
ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B... 390 e-106
ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-a... 389 e-105
ref|XP_004138199.1| PREDICTED: ras GTPase-activating protein-bin... 388 e-105
>emb|CBI15315.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 395 bits (1015), Expect = e-107
Identities = 230/480 (47%), Positives = 296/480 (61%), Gaps = 5/480 (1%)
Frame = +2
Query: 113 LKLHFLF*QTKMATPTAAKSPGASVVGNAFVEQYYHILHKSPELVYRFYQDSSMIARPDA 292
L FLF M T A A+ VGNAFV+QYY ILH++PEL+Y+FYQDSS+++RPD+
Sbjct: 26 LHSRFLF-YMAMQEATPAPLHSAAFVGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDS 84
Query: 293 NGAMTSVTTMKAINDLIISLDYQKYKAEIFSADAQESHKDGVMVLVTGCLTGKDNMQRKF 472
+G+MT+VTT++AIND I+S Y +YK EI +ADAQ+S+K+GV VLVTG +T KDN++RKF
Sbjct: 85 SGSMTTVTTLQAINDKIMSFHYGEYKMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKF 144
Query: 473 AQSFFLAPQDVGYFVFNDVFRYVDENESLHTNSVALNRXXXXXXXXXXXPDRDLTHVSEH 652
QSFFLAPQD GYFV ND+F Y++E +SL N ++ PD + HV +H
Sbjct: 145 GQSFFLAPQDNGYFVLNDIFTYIEEKKSLQENFAPVDGINETAPTAALTPDPEANHVPDH 204
Query: 653 PVTKPVTSLV--EESLDNNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASS 826
V P T EE L+N EV +PSD EEGSV + E + EP + S +NE + ++A +
Sbjct: 205 LVVDPATPSFEEEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPA 264
Query: 827 LPHEDAIKKSYASILKVVKGTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXX 1006
EDA KKSYASI+KV+KG+ T PV+ ++ R A DQQ
Sbjct: 265 -AQEDAPKKSYASIVKVMKGSATSTPVFA-TSTVRAAPANIDQQLAGSAKSAPAPEAWTP 322
Query: 1007 XXXXXXXITDAHEEVEGHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYC 1186
++ +E EG SIY+R L ++ T+ ++EEEFKKFG +K GIQVR NK QG+C
Sbjct: 323 TSDSAPESSNINE--EGFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNK-QGFC 379
Query: 1187 FGFVEFEELSSMHSALEASPITIGGRQAFIEQKRTTSR-GVVGRG--PPNREGIRTDXXX 1357
FGFVEFE LSSM SALEASPITIG RQA +E+KRTT+R G GRG PP R G R D
Sbjct: 380 FGFVEFESLSSMQSALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPPGRGGFRNDNFR 439
Query: 1358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRGVEGYQRVNQNVSGRTGRQGGVNQTNSS 1537
GR E YQRVNQN SG+TGRQGG+ ++S
Sbjct: 440 GRGNFGGGRGYGRNESRNQGEYSGRARGPTGRNGEAYQRVNQNGSGKTGRQGGMAWNSAS 499
>ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|222867121|gb|EEF04252.1|
predicted protein [Populus trichocarpa]
Length = 458
Score = 392 bits (1008), Expect = e-106
Identities = 214/405 (52%), Positives = 272/405 (67%), Gaps = 4/405 (0%)
Frame = +2
Query: 146 MATPTAAKS--PGASVVGNAFVEQYYHILHKSPELVYRFYQDSSMIARPDANGAMTSVTT 319
MA TA+ P A VVGNAFVEQYY+IL SPE V+RFYQDSS+++RPDANG +TSVTT
Sbjct: 1 MALQTASNPTLPSAQVVGNAFVEQYYYILLTSPESVHRFYQDSSVLSRPDANGVVTSVTT 60
Query: 320 MKAINDLIISLDYQKYKAEIFSADAQESHKDGVMVLVTGCLTGKDNMQRKFAQSFFLAPQ 499
M+ IN+ I+SLD++ KAEI +ADAQ S+KDGV VLVTGC TGKDN++RKFAQSFFLAPQ
Sbjct: 61 MQGINEKILSLDFKDCKAEIKTADAQISYKDGVTVLVTGCFTGKDNVKRKFAQSFFLAPQ 120
Query: 500 DVGYFVFNDVFRYVDENESLHTNSVALNRXXXXXXXXXXXPDRDLTHVSEHPVTKPVTSL 679
D GYFV NDVFRYVD+NESL ++ L PD++ HV + P+ S+
Sbjct: 121 DSGYFVLNDVFRYVDDNESLESH---LGHGVDSNPIVPSIPDQEPAHVPDPSAPDPLPSV 177
Query: 680 VEESLDNNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSY 859
VEE E+ + SD+E+ V+D E+I E S +N + E+ SS+ EDA KKSY
Sbjct: 178 VEEHKKLAEKANESSDHEKQLVNDREIIVEDL--SDENNVPVVVESVSSMIQEDAPKKSY 235
Query: 860 ASILKVVKGTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXXITDA 1039
ASI+KV KG+ PI VY+PAN+ ++ +T+ QS + A
Sbjct: 236 ASIVKVAKGSLLPIKVYLPANTTKMVPKRTENQSEKSVAPVLEPETSVPSSNDAPETSSA 295
Query: 1040 HEEVEGHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSS 1219
EEVEGHSIYIR+L N+T+ ++E EF+KFG +K GG+QVR N+QQGYCFGFVEF +S
Sbjct: 296 QEEVEGHSIYIRNLPFNLTVSQLEAEFEKFGPIKEGGVQVRYNRQQGYCFGFVEFHSPNS 355
Query: 1220 MHSALEASPITIGGRQAFIEQKRTTSRGVVGRG--PPNREGIRTD 1348
M+SA+EASP+TIGGRQ +E KRT +R GRG R G R D
Sbjct: 356 MNSAIEASPMTIGGRQIVVEMKRTNTRVGSGRGNFSYGRAGFRND 400
>ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
[Vitis vinifera]
Length = 469
Score = 390 bits (1002), Expect = e-106
Identities = 227/471 (48%), Positives = 292/471 (61%), Gaps = 7/471 (1%)
Frame = +2
Query: 146 MATPTAAKSPGASVVGNAFVEQYYHILHKSPELVYRFYQDSSMIARPDANGAMTSVTTMK 325
M T A A+ VGNAFV+QYY ILH++PEL+Y+FYQDSS+++RPD++G+MT+VTT++
Sbjct: 3 MQEATPAPLHSAAFVGNAFVDQYYPILHQNPELLYKFYQDSSVLSRPDSSGSMTTVTTLQ 62
Query: 326 AINDLIISLDYQKYKAEIFSADAQESHKDGVMVLVTGCLTGKDNMQRKFAQSFFLAPQDV 505
AIND I+S Y +YK EI +ADAQ+S+K+GV VLVTG +T KDN++RKF QSFFLAPQD
Sbjct: 63 AINDKIMSFHYGEYKMEIETADAQDSYKEGVTVLVTGSVTLKDNVKRKFGQSFFLAPQDN 122
Query: 506 GYFVFNDVFRYVDENESLHTNSVALNRXXXXXXXXXXXPDRDL--THVSEHPVTKPVTSL 679
GYFV ND+F Y++E +SL N ++ PD L HV +H V P T
Sbjct: 123 GYFVLNDIFTYIEEKKSLQENFAPVDGINETAPTAALTPDPGLXANHVPDHLVVDPATPS 182
Query: 680 V--EESLDNNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKK 853
EE L+N EV +PSD EEGSV + E + EP + S +NE + ++A + EDA KK
Sbjct: 183 FEEEEDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPA-AQEDAPKK 241
Query: 854 SYASILKVVKGTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXXIT 1033
SYASI+KV+KG+ T PV+ ++ R A DQQ +
Sbjct: 242 SYASIVKVMKGSATSTPVFA-TSTVRAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESS 300
Query: 1034 DAHEEVEGHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEEL 1213
+ +E EG SIY+R L ++ T+ ++EEEFKKFG +K GIQVR NK QG+CFGFVEFE L
Sbjct: 301 NINE--EGFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNK-QGFCFGFVEFESL 357
Query: 1214 SSMHSALEASPITIGGRQAFIEQKRTTSR-GVVGRG--PPNREGIRTDXXXXXXXXXXXX 1384
SSM SALEASPITIG RQA +E+KRTT+R G GRG PP R G R D
Sbjct: 358 SSMQSALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPPGRGGFRNDNFRGRGNFGGGR 417
Query: 1385 XXXXXXXXXXXXXXXXXXXALGRGVEGYQRVNQNVSGRTGRQGGVNQTNSS 1537
GR E YQRVNQN SG+TGRQGG+ ++S
Sbjct: 418 GYGRNESRNQGEYSGRARGPTGRNGEAYQRVNQNGSGKTGRQGGMAWNSAS 468
>ref|XP_004169646.1| PREDICTED: LOW QUALITY PROTEIN: ras GTPase-activating protein-binding
protein 1-like [Cucumis sativus]
Length = 472
Score = 389 bits (1000), Expect = e-105
Identities = 225/465 (48%), Positives = 289/465 (62%), Gaps = 8/465 (1%)
Frame = +2
Query: 158 TAAKSPGASVVGNAFVEQYYHILHKSPELVYRFYQDSSMIARPDANGAMTSVTTMKAIND 337
+++ +P A VVGNAFV QYYHILH SP+LV+RFYQD+S+++RPD NG MT+VT+M+AIND
Sbjct: 8 SSSPTPSAQVVGNAFVGQYYHILHHSPQLVHRFYQDTSLLSRPDGNGVMTTVTSMQAIND 67
Query: 338 LIISLDYQKYKAEIFSADAQESHKDGVMVLVTGCLTGKDNMQRKFAQSFFLAPQDVGYFV 517
IISL+Y Y AEI +ADAQESH+ GV+VLVTGCLTGKD+++RKF+Q+FF APQD GY+V
Sbjct: 68 KIISLNYGDYTAEIITADAQESHEKGVIVLVTGCLTGKDSLRRKFSQTFFXAPQDKGYYV 127
Query: 518 FNDVFRYVDENESLHTNSVALNRXXXXXXXXXXXPDRDLTHVSEHPVTKPVTSLVEESLD 697
NDV RYV+E ES+ +NS + + P+ + +HV H +P T+L EE ++
Sbjct: 128 LNDVLRYVEETESIRSNSSSGDAIKDNTVTVTSTPEPEPSHVPNHLTVEPPTALEEEDMN 187
Query: 698 NNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYASILKV 877
N EV +PS +EGSV + EV+ E A H ++E + A+ + EDA KKSYASI+KV
Sbjct: 188 NVPEVCDPSSNDEGSVIEEEVVVE-APHPSEHEVVVTAVDAAPVAQEDAPKKSYASIVKV 246
Query: 878 VKGTRTPIPVYVPANSARV-ASGKTDQQSXXXXXXXXXXXXXXXXXXXXXXITDAHEEVE 1054
K PVYVP + R D QS ++ HEE E
Sbjct: 247 PKTVSG--PVYVPTTTVRAPPPANPDHQSTGLVKPAPVPDVSAANGDNLPESSNLHEEAE 304
Query: 1055 GHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMHSAL 1234
GHSIY+R+L + T++ +EEEFKKFG +K GIQVR NK QG+CFGFVEFE+LSS+H AL
Sbjct: 305 GHSIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNK-QGFCFGFVEFEQLSSVHGAL 363
Query: 1235 EASPITIGGRQAFIEQKRTTSR-GVVGRG---PPNREGIRTD-XXXXXXXXXXXXXXXXX 1399
EASP+TIG RQA +E+KRTT+R GRG G R D
Sbjct: 364 EASPLTIGDRQAVVEEKRTTTRVSGSGRGRFSTGRGGGFRNDSFRARGNYGGGRGGYGRN 423
Query: 1400 XXXXXXXXXXXXXXALGR-GVEGYQRVNQNVSGR-TGRQGGVNQT 1528
+ GR G GYQR NQN GR GRQGG N+T
Sbjct: 424 EFRNQGEFSGRPRGSTGRNGEGGYQRANQNGGGRGGGRQGGANRT 468
>ref|XP_004138199.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Cucumis sativus]
Length = 472
Score = 388 bits (997), Expect = e-105
Identities = 225/465 (48%), Positives = 289/465 (62%), Gaps = 8/465 (1%)
Frame = +2
Query: 158 TAAKSPGASVVGNAFVEQYYHILHKSPELVYRFYQDSSMIARPDANGAMTSVTTMKAIND 337
+++ +P A VVGNAFV QYYHILH SP+LV+RFYQD+S+++RPD NG MT+VT+M+AIND
Sbjct: 8 SSSPTPSAQVVGNAFVGQYYHILHHSPQLVHRFYQDTSLLSRPDGNGVMTTVTSMQAIND 67
Query: 338 LIISLDYQKYKAEIFSADAQESHKDGVMVLVTGCLTGKDNMQRKFAQSFFLAPQDVGYFV 517
IISL+Y Y AEI +ADAQESH+ GV+VLVTGCLTGKD+++RKF+Q+FFLAPQD GY+V
Sbjct: 68 KIISLNYGDYTAEIITADAQESHEKGVIVLVTGCLTGKDSLRRKFSQTFFLAPQDKGYYV 127
Query: 518 FNDVFRYVDENESLHTNSVALNRXXXXXXXXXXXPDRDLTHVSEHPVTKPVTSLVEESLD 697
NDV RYV+E ES+ +NS + + P+ + +HV H +P T+L EE ++
Sbjct: 128 LNDVLRYVEETESIRSNSSSGDAIKDNTVTVTSTPEPEPSHVPNHLTVEPPTALEEEDMN 187
Query: 698 NNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYASILKV 877
N EV +PS +EGSV + EV+ E A H ++E + A+ + EDA KKSYASI+KV
Sbjct: 188 NVPEVCDPSSNDEGSVIEEEVVVE-APHPSEHEVVVTAVDAAPVAQEDAPKKSYASIVKV 246
Query: 878 VKGTRTPIPVYVPANSARV-ASGKTDQQSXXXXXXXXXXXXXXXXXXXXXXITDAHEEVE 1054
K PVYVP + R D QS ++ HEE E
Sbjct: 247 PKTVSG--PVYVPTTTVRAPPPANPDHQSTGLVKPAPVPDVSAANGDNLPESSNLHEEAE 304
Query: 1055 GHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMHSAL 1234
GHSIY+R+L + T++ +EEEFKKFG +K GIQVR NK QG+CFGFVEFE+LSS+H AL
Sbjct: 305 GHSIYVRNLPFDATVDHLEEEFKKFGPIKRDGIQVRSNK-QGFCFGFVEFEQLSSVHGAL 363
Query: 1235 EASPITIGGRQAFIEQKRTTSR-GVVGRG---PPNREGIRTD-XXXXXXXXXXXXXXXXX 1399
EASP+TIG QA +E+KRTT+R GRG G R D
Sbjct: 364 EASPLTIGDCQAVVEEKRTTTRVSGSGRGRFSTGRGGGFRNDSFRARGNYGGGRGGYGRN 423
Query: 1400 XXXXXXXXXXXXXXALGR-GVEGYQRVNQNVSGR-TGRQGGVNQT 1528
+ GR G GYQR NQN GR GRQGG N+T
Sbjct: 424 EFRNQGEFSGRPRGSTGRNGEGGYQRANQNGGGRGGGRQGGANRT 468