BLASTX nr result

ID: Coptis25_contig00003957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003957
         (1825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274979.1| PREDICTED: OTU domain-containing protein DDB...   326   3e-90
gb|AFK34783.1| unknown [Lotus japonicus]                              323   7e-89
ref|XP_002307916.1| predicted protein [Populus trichocarpa] gi|2...   323   5e-88
ref|XP_002322554.1| predicted protein [Populus trichocarpa] gi|2...   327   6e-88
ref|XP_003632773.1| PREDICTED: OTU domain-containing protein DDB...   317   1e-87

>ref|XP_002274979.1| PREDICTED: OTU domain-containing protein DDB_G0284757 isoform 1
            [Vitis vinifera] gi|297743628|emb|CBI36495.3| unnamed
            protein product [Vitis vinifera]
          Length = 232

 Score =  326 bits (835), Expect(2) = 3e-90
 Identities = 157/193 (81%), Positives = 176/193 (91%), Gaps = 1/193 (0%)
 Frame = -2

Query: 1164 LQDTEDDKTIASILAEENFAESG-KLGKRLSHLDSIPHTPRVNGVIPDVGDATLDHERLS 988
            LQDTEDD+TIA ILAEE   ++G KLGKRLSHL+SIPHTPRVNG IPDV DATLDHERL+
Sbjct: 26   LQDTEDDQTIARILAEEESLKNGNKLGKRLSHLNSIPHTPRVNGEIPDVNDATLDHERLA 85

Query: 987  ERLTTYGLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKQVVKQLKHCKHLYESYVPMD 808
            ERL TY LAELQIEGDGNCQFRALADQLFRNPDYHKHVRK+VVKQLKH + LYESYVPM 
Sbjct: 86   ERLATYDLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKKVVKQLKHFRKLYESYVPMK 145

Query: 807  YKSYLKKMKRSGEWGDHVTLQAAADRFSAKICLLTSFRDTYYIEIVPKEKSPSRVLWLSF 628
            Y+SYLK+MK+SGEWGDH+TLQAAADRF AKICL+TSFRDT +IEI P++ +P+R LWLSF
Sbjct: 146  YRSYLKQMKKSGEWGDHLTLQAAADRFGAKICLITSFRDTCFIEINPRDGNPTRELWLSF 205

Query: 627  WSEVHYNSLYSNG 589
            WSEVHYNSLY++G
Sbjct: 206  WSEVHYNSLYASG 218



 Score = 34.7 bits (78), Expect(2) = 3e-90
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -1

Query: 484 DVPSRAPRKKHWLF 443
           DVPSRAPRK+HWLF
Sbjct: 219 DVPSRAPRKRHWLF 232


>gb|AFK34783.1| unknown [Lotus japonicus]
          Length = 226

 Score =  323 bits (829), Expect(2) = 7e-89
 Identities = 157/192 (81%), Positives = 170/192 (88%), Gaps = 1/192 (0%)
 Frame = -2

Query: 1161 QDTEDDKTIASILAEE-NFAESGKLGKRLSHLDSIPHTPRVNGVIPDVGDATLDHERLSE 985
            QDTEDD+TIASILAEE +  E  +LGKRLSHL+SIPHTPRVNG IPDV DAT DH  LSE
Sbjct: 21   QDTEDDQTIASILAEEESLKEENRLGKRLSHLNSIPHTPRVNGEIPDVNDATQDHGMLSE 80

Query: 984  RLTTYGLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKQVVKQLKHCKHLYESYVPMDY 805
            RL TYGL ELQ+EGDGNCQFRALADQLF NP+YHKHVR+QV+KQLKH K LYESYVPM+Y
Sbjct: 81   RLVTYGLTELQMEGDGNCQFRALADQLFGNPEYHKHVRRQVIKQLKHHKKLYESYVPMEY 140

Query: 804  KSYLKKMKRSGEWGDHVTLQAAADRFSAKICLLTSFRDTYYIEIVPKEKSPSRVLWLSFW 625
            KSYLKKMK+SGEWGDHVTLQAAADRF AKICL+TSFRDTYYIEI+P  K  +R LWLSFW
Sbjct: 141  KSYLKKMKKSGEWGDHVTLQAAADRFEAKICLVTSFRDTYYIEILPTNKRLTRELWLSFW 200

Query: 624  SEVHYNSLYSNG 589
            SEVHYNSLYS G
Sbjct: 201  SEVHYNSLYSTG 212



 Score = 32.3 bits (72), Expect(2) = 7e-89
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -1

Query: 484 DVPSRAPRKKHWLF 443
           DVPSRAP+KK+WLF
Sbjct: 213 DVPSRAPKKKYWLF 226


>ref|XP_002307916.1| predicted protein [Populus trichocarpa] gi|222853892|gb|EEE91439.1|
            predicted protein [Populus trichocarpa]
          Length = 226

 Score =  323 bits (828), Expect(2) = 5e-88
 Identities = 154/191 (80%), Positives = 172/191 (90%), Gaps = 1/191 (0%)
 Frame = -2

Query: 1158 DTEDDKTIASILAEENFAE-SGKLGKRLSHLDSIPHTPRVNGVIPDVGDATLDHERLSER 982
            D EDD+TIASILAE+  ++ +G LGKRLSHLDSIPHTPRVNG IPDV DATLDHERLSER
Sbjct: 22   DIEDDQTIASILAEDESSQVAGTLGKRLSHLDSIPHTPRVNGEIPDVNDATLDHERLSER 81

Query: 981  LTTYGLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKQVVKQLKHCKHLYESYVPMDYK 802
            L TYGL ELQIEGDGNCQFRALADQLFR+PDYHKHVRK++VKQLKH +  YE YVPM Y+
Sbjct: 82   LATYGLEELQIEGDGNCQFRALADQLFRSPDYHKHVRKKIVKQLKHFRKSYEGYVPMKYR 141

Query: 801  SYLKKMKRSGEWGDHVTLQAAADRFSAKICLLTSFRDTYYIEIVPKEKSPSRVLWLSFWS 622
            SY+KKMK+ GEWGDH+TLQAAADRF AKICL+TSFRDT YIEI+PK+KSP+R LWLSFWS
Sbjct: 142  SYVKKMKKPGEWGDHLTLQAAADRFGAKICLVTSFRDTCYIEIMPKDKSPTRELWLSFWS 201

Query: 621  EVHYNSLYSNG 589
            EVHYNSLY+ G
Sbjct: 202  EVHYNSLYATG 212



 Score = 30.0 bits (66), Expect(2) = 5e-88
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -1

Query: 484 DVPSRAPRKKHWLF 443
           DVP+R  RKKHWLF
Sbjct: 213 DVPTRVARKKHWLF 226


>ref|XP_002322554.1| predicted protein [Populus trichocarpa] gi|222867184|gb|EEF04315.1|
            predicted protein [Populus trichocarpa]
          Length = 230

 Score =  327 bits (838), Expect(2) = 6e-88
 Identities = 155/191 (81%), Positives = 172/191 (90%), Gaps = 1/191 (0%)
 Frame = -2

Query: 1158 DTEDDKTIASILAEE-NFAESGKLGKRLSHLDSIPHTPRVNGVIPDVGDATLDHERLSER 982
            DTEDD+TIASILAEE N   +G+LGKRLSHLDSIPHTPRVNG IPDV DATLDHERLSER
Sbjct: 22   DTEDDQTIASILAEEGNSQVAGRLGKRLSHLDSIPHTPRVNGEIPDVNDATLDHERLSER 81

Query: 981  LTTYGLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKQVVKQLKHCKHLYESYVPMDYK 802
            L TYGL EL++EGDGNCQFRALADQLFR+PDYHKH RKQ++KQLKH + LYE YVPM Y+
Sbjct: 82   LATYGLEELKMEGDGNCQFRALADQLFRSPDYHKHARKQIIKQLKHHRKLYEGYVPMKYR 141

Query: 801  SYLKKMKRSGEWGDHVTLQAAADRFSAKICLLTSFRDTYYIEIVPKEKSPSRVLWLSFWS 622
            SY+K MK+SGEWGDHVTLQAAADRF AKIC+LTSFRDT YIEI PK++SP+R +WLSFWS
Sbjct: 142  SYVKNMKKSGEWGDHVTLQAAADRFGAKICVLTSFRDTCYIEIFPKDRSPTREIWLSFWS 201

Query: 621  EVHYNSLYSNG 589
            EVHYNSLY NG
Sbjct: 202  EVHYNSLYENG 212



 Score = 25.8 bits (55), Expect(2) = 6e-88
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 487 TDVPSRAPRKKHWLF 443
           T VP+R  RKK+W F
Sbjct: 216 TSVPTRVARKKYWFF 230


>ref|XP_003632773.1| PREDICTED: OTU domain-containing protein DDB_G0284757 isoform 2
            [Vitis vinifera]
          Length = 244

 Score =  317 bits (812), Expect(2) = 1e-87
 Identities = 157/205 (76%), Positives = 176/205 (85%), Gaps = 13/205 (6%)
 Frame = -2

Query: 1164 LQDTEDDKTIASILAEENFAESG-KLGKRLSHLDSIPHTPRVNGVIPDVGDATLDHERLS 988
            LQDTEDD+TIA ILAEE   ++G KLGKRLSHL+SIPHTPRVNG IPDV DATLDHERL+
Sbjct: 26   LQDTEDDQTIARILAEEESLKNGNKLGKRLSHLNSIPHTPRVNGEIPDVNDATLDHERLA 85

Query: 987  ERLTTYGLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKQVVKQ------------LKH 844
            ERL TY LAELQIEGDGNCQFRALADQLFRNPDYHKHVRK+VVKQ            LKH
Sbjct: 86   ERLATYDLAELQIEGDGNCQFRALADQLFRNPDYHKHVRKKVVKQIDGDSPAYTSVYLKH 145

Query: 843  CKHLYESYVPMDYKSYLKKMKRSGEWGDHVTLQAAADRFSAKICLLTSFRDTYYIEIVPK 664
             + LYESYVPM Y+SYLK+MK+SGEWGDH+TLQAAADRF AKICL+TSFRDT +IEI P+
Sbjct: 146  FRKLYESYVPMKYRSYLKQMKKSGEWGDHLTLQAAADRFGAKICLITSFRDTCFIEINPR 205

Query: 663  EKSPSRVLWLSFWSEVHYNSLYSNG 589
            + +P+R LWLSFWSEVHYNSLY++G
Sbjct: 206  DGNPTRELWLSFWSEVHYNSLYASG 230



 Score = 34.7 bits (78), Expect(2) = 1e-87
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -1

Query: 484 DVPSRAPRKKHWLF 443
           DVPSRAPRK+HWLF
Sbjct: 231 DVPSRAPRKRHWLF 244


Top