BLASTX nr result
ID: Coptis25_contig00003942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003942
(1292 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|1... 80 2e-26
gb|AFK46230.1| unknown [Lotus japonicus] 74 5e-26
ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus co... 73 5e-26
ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like prote... 73 8e-26
ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. ly... 74 1e-25
>ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|118487115|gb|ABK95387.1|
unknown [Populus trichocarpa]
gi|222871000|gb|EEF08131.1| predicted protein [Populus
trichocarpa]
Length = 352
Score = 80.1 bits (196), Expect(3) = 2e-26
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +1
Query: 775 GDEKVRLLTSQGANHVLNTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKVSMKLLN 954
GDEKV+ L S G +HV+++SK + VK+FLKARKL+ V VLYDPVGGK TK SMKLLN
Sbjct: 188 GDEKVQFLKSLGVDHVVDSSKESVIASVKDFLKARKLKGVDVLYDPVGGKLTKESMKLLN 247
Query: 955 CGAK 966
GA+
Sbjct: 248 WGAQ 251
Score = 58.5 bits (140), Expect(3) = 2e-26
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +3
Query: 1083 AELQNWTIHGLHWTSYRFHRPSAYEDSMKELFSRRARGSITINV 1214
A ++NWT+HGL+W SY+ HRP EDS++EL S A+G ITI++
Sbjct: 270 ALVKNWTVHGLYWGSYKIHRPVVLEDSIRELLSWVAKGRITIHI 313
Score = 28.5 bits (62), Expect(3) = 2e-26
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 971 LFVGFAS*EIPFIPVNIAL 1027
L +GFAS ++P IP NIAL
Sbjct: 253 LVIGFASGDVPVIPANIAL 271
>gb|AFK46230.1| unknown [Lotus japonicus]
Length = 346
Score = 73.9 bits (180), Expect(3) = 5e-26
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = +1
Query: 775 GDEKVRLLTSQGANHVLNTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKVSMKLLN 954
G EKV+LL S G +HV++ + N E VKEFLKARKL+ + VLYDPVGGK TK ++LL
Sbjct: 183 GAEKVQLLKSHGVDHVVDLTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRLLK 242
Query: 955 CGA 963
GA
Sbjct: 243 WGA 245
Score = 60.1 bits (144), Expect(3) = 5e-26
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +3
Query: 1083 AELQNWTIHGLHWTSYRFHRPSAYEDSMKELFSRRARGSITINV 1214
A ++NWT+HGL+W SY+ HRP EDS+KEL S ARG I++++
Sbjct: 265 ALVKNWTVHGLYWGSYKIHRPRVLEDSLKELLSWLARGMISVHI 308
Score = 31.6 bits (70), Expect(3) = 5e-26
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 965 NNLFVGFAS*EIPFIPVNIAL 1027
N L +GFAS EIP IP NIAL
Sbjct: 246 NILIIGFASGEIPVIPANIAL 266
>ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus communis]
gi|223540030|gb|EEF41608.1| quinone oxidoreductase,
putative [Ricinus communis]
Length = 344
Score = 73.2 bits (178), Expect(3) = 5e-26
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +1
Query: 775 GDEKVRLLTSQGANHVLNTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKVSMKLLN 954
G EKV LL S G +HV+++SK N VK+FL ++KL+ V VLYDPVGGK TK S+KLLN
Sbjct: 180 GFEKVELLKSLGVDHVVDSSKENVIASVKDFLLSKKLKGVDVLYDPVGGKLTKDSLKLLN 239
Query: 955 CGAK 966
GA+
Sbjct: 240 WGAQ 243
Score = 62.4 bits (150), Expect(3) = 5e-26
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +3
Query: 1083 AELQNWTIHGLHWTSYRFHRPSAYEDSMKELFSRRARGSITINV 1214
A ++NWTIHGL+W SYR HRP EDS++EL S A+G ITI++
Sbjct: 262 ALVKNWTIHGLYWGSYRIHRPGVLEDSLRELLSWMAKGQITIHI 305
Score = 30.0 bits (66), Expect(3) = 5e-26
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 971 LFVGFAS*EIPFIPVNIAL 1027
L +GFAS EIP IP NIAL
Sbjct: 245 LVIGFASGEIPVIPANIAL 263
>ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Vitis
vinifera] gi|297736646|emb|CBI25517.3| unnamed protein
product [Vitis vinifera]
Length = 345
Score = 73.2 bits (178), Expect(3) = 8e-26
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +1
Query: 775 GDEKVRLLTSQGANHVLNTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKVSMKLLN 954
G KV++L S G +HV+++S N E VK FLKA+KL+ V VLYDPVGGK TK +MKLLN
Sbjct: 181 GAGKVQILKSLGVDHVVDSSIENVTESVKNFLKAKKLKGVDVLYDPVGGKLTKETMKLLN 240
Query: 955 CGA 963
GA
Sbjct: 241 WGA 243
Score = 62.0 bits (149), Expect(3) = 8e-26
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +3
Query: 1083 AELQNWTIHGLHWTSYRFHRPSAYEDSMKELFSRRARGSITINV 1214
A ++NWT+HGL+W SYR HRP EDSMKEL S ARG I I++
Sbjct: 263 ALVKNWTVHGLYWGSYRIHRPGVLEDSMKELLSWLARGLIEIHI 306
Score = 29.6 bits (65), Expect(3) = 8e-26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 971 LFVGFAS*EIPFIPVNIAL 1027
L +GFAS E+P IP NIAL
Sbjct: 246 LVIGFASGEVPVIPANIAL 264
>ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297323924|gb|EFH54345.1| oxidoreductase [Arabidopsis
lyrata subsp. lyrata]
Length = 348
Score = 73.6 bits (179), Expect(3) = 1e-25
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 775 GDEKVRLLTSQGANHVLNTSKVNSAEGVKEFLKARKLREVGVLYDPVGGKPTKVSMKLLN 954
G EK++LL S G +HV++ N VKEF+K RKLR V VLYDPVGGK TK SMK+L
Sbjct: 184 GTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLRGVDVLYDPVGGKLTKESMKVLK 243
Query: 955 CGAK 966
GA+
Sbjct: 244 WGAQ 247
Score = 60.5 bits (145), Expect(3) = 1e-25
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +3
Query: 1083 AELQNWTIHGLHWTSYRFHRPSAYEDSMKELFSRRARGSITINV 1214
A ++NWT+HGL+W SYR H+P+ EDS+KEL S +RG ITI++
Sbjct: 266 ALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWLSRGLITIHI 309
Score = 30.0 bits (66), Expect(3) = 1e-25
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 971 LFVGFAS*EIPFIPVNIAL 1027
L +GFAS EIP IP NIAL
Sbjct: 249 LVIGFASGEIPVIPANIAL 267