BLASTX nr result

ID: Coptis25_contig00003939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003939
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   211   e-118
emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   210   e-117
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   200   e-114
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   197   e-109
ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|2...   198   e-109

>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  211 bits (536), Expect(3) = e-118
 Identities = 101/121 (83%), Positives = 113/121 (93%)
 Frame = -2

Query: 1487 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 1308
            MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII+LMAP+YA+ 
Sbjct: 1    MDISTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVD 60

Query: 1307 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 1128
            SFVGL DFQGS+ FF+ LES+KECYEALVIAKFLALLYSYLNISIS ++VPDG+KGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 1127 H 1125
            H
Sbjct: 121  H 121



 Score =  151 bits (382), Expect(3) = e-118
 Identities = 69/98 (70%), Positives = 79/98 (80%)
 Frame = -1

Query: 1041 FPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPFCSVLMISLQLLGMYQSWISWTFTIIX 862
            FPMTLFQP TVRLD  TLKLLKYWTWQFVVIRP CS+LMI+LQ+LG+Y +W+SWTFTII 
Sbjct: 123  FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGIYPNWLSWTFTIIL 182

Query: 861  XXXXXXXXXXXXLFYHAFAKELEPHKPLSKFLCIKGIV 748
                        LFYH FAKEL+PHKPL+KF+C+KGIV
Sbjct: 183  NISVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIV 220



 Score =  112 bits (279), Expect(3) = e-118
 Identities = 53/68 (77%), Positives = 58/68 (85%)
 Frame = -2

Query: 647 QGIVLDVLVDMGVIRSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAA 468
           QGIVL++LV +GVIRSHHFWLDVEH++EA QNVLVC EMVVFSVLQQYAFHVAPY GD  
Sbjct: 226 QGIVLEILVALGVIRSHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYSGDME 285

Query: 467 AKLGQKNK 444
           AKL    K
Sbjct: 286 AKLKLSKK 293


>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  210 bits (534), Expect(3) = e-117
 Identities = 101/121 (83%), Positives = 112/121 (92%)
 Frame = -2

Query: 1487 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 1308
            MD STMDRGQ+TLLGSA  VML+MHFTVQL+SQHLFYWKNPKEQKAIIII LMAP+YA+ 
Sbjct: 1    MDJSTMDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVD 60

Query: 1307 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 1128
            SFVGL DFQGS+ FF+ LES+KECYEALVIAKFLALLYSYLNISIS ++VPDG+KGREIH
Sbjct: 61   SFVGLLDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIH 120

Query: 1127 H 1125
            H
Sbjct: 121  H 121



 Score =  153 bits (386), Expect(3) = e-117
 Identities = 70/98 (71%), Positives = 79/98 (80%)
 Frame = -1

Query: 1041 FPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPFCSVLMISLQLLGMYQSWISWTFTIIX 862
            FPMTLFQP TVRLD  TLKLLKYWTWQFVVIRP CS+LMI+LQ+LGMY +W+SWTFTII 
Sbjct: 123  FPMTLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGMYPNWLSWTFTIIL 182

Query: 861  XXXXXXXXXXXXLFYHAFAKELEPHKPLSKFLCIKGIV 748
                        LFYH FAKEL+PHKPL+KF+C+KGIV
Sbjct: 183  NFSVSLALYSLVLFYHVFAKELKPHKPLTKFMCVKGIV 220



 Score =  110 bits (275), Expect(3) = e-117
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -2

Query: 647 QGIVLDVLVDMGVIRSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAA 468
           QGIVL++LV +G+IRSHHFWLDVEH++EA QNVLVC EMVVFSVLQQYA+HVAPY GD  
Sbjct: 226 QGIVLEILVALGIIRSHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAYHVAPYSGDME 285

Query: 467 AKLGQKNK 444
           AKL    K
Sbjct: 286 AKLKLSKK 293


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
            gi|223539328|gb|EEF40919.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 294

 Score =  200 bits (508), Expect(3) = e-114
 Identities = 94/121 (77%), Positives = 111/121 (91%)
 Frame = -2

Query: 1487 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 1308
            MD ST++RGQ+TL+GSA   ML+MHFTVQLLSQHLFYWKNPKEQKAI+II+LMAP+YAI 
Sbjct: 1    MDISTLNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAID 60

Query: 1307 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 1128
            SFVGL D +GS+ FF+FL+S+KECYEALVIAKFLAL+YSYLNISIS ++VPD +KGREIH
Sbjct: 61   SFVGLLDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGREIH 120

Query: 1127 H 1125
            H
Sbjct: 121  H 121



 Score =  153 bits (387), Expect(3) = e-114
 Identities = 70/98 (71%), Positives = 78/98 (79%)
 Frame = -1

Query: 1041 FPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPFCSVLMISLQLLGMYQSWISWTFTIIX 862
            FPMTLFQPHTVRLD  TL+LLKYWTWQFV+IRP CSVLMI+LQ+LG Y +W+SWTFTII 
Sbjct: 123  FPMTLFQPHTVRLDHRTLRLLKYWTWQFVIIRPICSVLMITLQILGTYPTWLSWTFTIIL 182

Query: 861  XXXXXXXXXXXXLFYHAFAKELEPHKPLSKFLCIKGIV 748
                        +FYH FAKEL PHKPL+KFLCIKGIV
Sbjct: 183  NISVSLALYSLVVFYHVFAKELTPHKPLAKFLCIKGIV 220



 Score =  109 bits (273), Expect(3) = e-114
 Identities = 49/63 (77%), Positives = 56/63 (88%)
 Frame = -2

Query: 647 QGIVLDVLVDMGVIRSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAA 468
           QG+VLD+LV +G+IRSHHFWLDVEH+EEA QNVLVC EMVVFSVLQQYA+HVAPY GD  
Sbjct: 226 QGVVLDILVAIGIIRSHHFWLDVEHIEEALQNVLVCLEMVVFSVLQQYAYHVAPYSGDIE 285

Query: 467 AKL 459
            K+
Sbjct: 286 RKM 288


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  197 bits (501), Expect(3) = e-109
 Identities = 95/122 (77%), Positives = 109/122 (89%)
 Frame = -2

Query: 1490 VMDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAI 1311
            +MDFS+MDRGQITLLG    V+L++HFTVQLLSQH+FYWKNPKEQKAIIII+LMAP+YA 
Sbjct: 1    MMDFSSMDRGQITLLGCGFCVLLSLHFTVQLLSQHIFYWKNPKEQKAIIIIILMAPIYAA 60

Query: 1310 VSFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREI 1131
             S+VGL D QGS+ FF FL+SVKECYEALVIAKFLAL+YSYL ISIS ++VPD VKGREI
Sbjct: 61   DSYVGLLDIQGSKAFFTFLDSVKECYEALVIAKFLALMYSYLKISISKNIVPDEVKGREI 120

Query: 1130 HH 1125
            HH
Sbjct: 121  HH 122



 Score =  142 bits (357), Expect(3) = e-109
 Identities = 65/98 (66%), Positives = 74/98 (75%)
 Frame = -1

Query: 1041 FPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPFCSVLMISLQLLGMYQSWISWTFTIIX 862
            FPMTLF P T RLD   L LLK+WTWQFV+IRP CS+LMI+LQ+LG+Y SW+SWTFTII 
Sbjct: 124  FPMTLFVPRTARLDHRNLVLLKHWTWQFVIIRPICSILMITLQMLGIYPSWLSWTFTIIL 183

Query: 861  XXXXXXXXXXXXLFYHAFAKELEPHKPLSKFLCIKGIV 748
                        LFYH FAKEL PHKPL+KFLCIKG+V
Sbjct: 184  NISVSVALYSLVLFYHVFAKELAPHKPLAKFLCIKGVV 221



 Score =  107 bits (267), Expect(3) = e-109
 Identities = 49/68 (72%), Positives = 58/68 (85%)
 Frame = -2

Query: 647 QGIVLDVLVDMGVIRSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAA 468
           QGIVLD+LV  G+IRSHHFWLDVEH+EEA+QNVLV  EMVVFSVLQQYA+HVAPY G+  
Sbjct: 227 QGIVLDMLVSAGIIRSHHFWLDVEHIEEAFQNVLVILEMVVFSVLQQYAYHVAPYSGEVE 286

Query: 467 AKLGQKNK 444
            K+ +K +
Sbjct: 287 TKMLKKRE 294


>ref|XP_002316649.1| predicted protein [Populus trichocarpa] gi|222859714|gb|EEE97261.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  198 bits (503), Expect(3) = e-109
 Identities = 98/121 (80%), Positives = 108/121 (89%)
 Frame = -2

Query: 1487 MDFSTMDRGQITLLGSACSVMLTMHFTVQLLSQHLFYWKNPKEQKAIIIIMLMAPVYAIV 1308
            MDFS MDRGQITLLG A  V+LT+ FTVQLLSQHLFYWKNPKEQKAIIII+LMAP+YA+ 
Sbjct: 1    MDFSNMDRGQITLLGCAFCVLLTLLFTVQLLSQHLFYWKNPKEQKAIIIIILMAPIYAVD 60

Query: 1307 SFVGLSDFQGSRTFFLFLESVKECYEALVIAKFLALLYSYLNISISNDVVPDGVKGREIH 1128
            SFVGL +FQGS  FF FL+SVKECYEALVIAKFL+LLYSYL ISIS ++VPD VKGREIH
Sbjct: 61   SFVGLLNFQGSEAFFTFLDSVKECYEALVIAKFLSLLYSYLKISISKNIVPDEVKGREIH 120

Query: 1127 H 1125
            H
Sbjct: 121  H 121



 Score =  143 bits (361), Expect(3) = e-109
 Identities = 64/98 (65%), Positives = 76/98 (77%)
 Frame = -1

Query: 1041 FPMTLFQPHTVRLDRSTLKLLKYWTWQFVVIRPFCSVLMISLQLLGMYQSWISWTFTIIX 862
            FPMTLF PHTVRLD   L +LK+WTWQFV+IRP CS+LMI+LQ+LG+Y +W+SWTFTII 
Sbjct: 123  FPMTLFVPHTVRLDHRNLVVLKHWTWQFVIIRPTCSILMITLQMLGIYPNWLSWTFTIIL 182

Query: 861  XXXXXXXXXXXXLFYHAFAKELEPHKPLSKFLCIKGIV 748
                        +FYH FAKEL PHKPL+KFLCIKG+V
Sbjct: 183  NISVSLALYSLLVFYHVFAKELAPHKPLAKFLCIKGVV 220



 Score =  103 bits (258), Expect(3) = e-109
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = -2

Query: 647 QGIVLDVLVDMGVIRSHHFWLDVEHVEEAYQNVLVCFEMVVFSVLQQYAFHVAPYMGDAA 468
           QGIVL++LV MG+IR +HFWLDVEH+EEAYQNVLV  EMVVFSVLQ+YA+HVAPY G+  
Sbjct: 226 QGIVLEMLVSMGIIRPNHFWLDVEHLEEAYQNVLVILEMVVFSVLQRYAYHVAPYSGEVD 285

Query: 467 AKLGQKNK 444
           AK+ +K +
Sbjct: 286 AKMLKKRE 293


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