BLASTX nr result

ID: Coptis25_contig00003933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003933
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546759.1| PREDICTED: mitochondrial import inner membra...    79   3e-13
gb|ABK23235.1| unknown [Picea sitchensis]                              78   6e-13
ref|XP_003543579.1| PREDICTED: mitochondrial import inner membra...    77   1e-12
ref|XP_003591008.1| Mitochondrial import inner membrane transloc...    77   2e-12
ref|XP_004141691.1| PREDICTED: mitochondrial import inner membra...    76   2e-12

>ref|XP_003546759.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like [Glycine max]
          Length = 188

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/60 (60%), Positives = 46/60 (76%)
 Frame = -3

Query: 332 KIRVSRILNSTGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGVFIK 153
           K+RV+R+LNS+G  G   GN L  +GL+YAG+ESGIV  R+TDDVWN+V AGLGTG   +
Sbjct: 94  KLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYR 153


>gb|ABK23235.1| unknown [Picea sitchensis]
          Length = 189

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = -3

Query: 338 SRKIRVSRILNSTGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGVF 159
           S K+RV+R+LN++G  G K GN L  +GL+YAGLESGIV  R TDD+ N+V AGLGTG  
Sbjct: 93  SMKLRVNRVLNASGHTGRKFGNRLGVIGLLYAGLESGIVAGRGTDDILNSVCAGLGTGAL 152

Query: 158 IK 153
            K
Sbjct: 153 YK 154


>ref|XP_003543579.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like [Glycine max]
          Length = 188

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -3

Query: 332 KIRVSRILNSTGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGVFIK 153
           K+RV+R+LNS+G  G   GN L  +GL+YAG+ESGI   R+TDDVWN+V AGLGTG   +
Sbjct: 94  KLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIEATRDTDDVWNSVAAGLGTGALYR 153


>ref|XP_003591008.1| Mitochondrial import inner membrane translocase subunit tim23
           [Medicago truncatula] gi|355480056|gb|AES61259.1|
           Mitochondrial import inner membrane translocase subunit
           tim23 [Medicago truncatula]
          Length = 185

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/62 (59%), Positives = 48/62 (77%)
 Frame = -3

Query: 338 SRKIRVSRILNSTGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGVF 159
           S K+RV+R+LNS G  G +LGNSL  LGLI+AGLESG+  +R+TDD+ N+ +AGLGTG  
Sbjct: 89  SVKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESGMTYFRDTDDLVNSAVAGLGTGAI 148

Query: 158 IK 153
            K
Sbjct: 149 YK 150


>ref|XP_004141691.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim23-like isoform 2 [Cucumis sativus]
           gi|449480555|ref|XP_004155929.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           tim23-like isoform 2 [Cucumis sativus]
          Length = 190

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/60 (60%), Positives = 44/60 (73%)
 Frame = -3

Query: 332 KIRVSRILNSTGARGSKLGNSLAALGLIYAGLESGIVGYRNTDDVWNNVLAGLGTGVFIK 153
           K+R++RILNS+G  G   GN L  +GL+YAGLESGI   R+TDDVWN V AGLGTG   +
Sbjct: 96  KLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYR 155


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