BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003930
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indi...    86   1e-31
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    82   5e-31
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    91   4e-30
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    79   1e-29
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    79   1e-29

>gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indica Group]
          Length = 374

 Score = 86.3 bits (212), Expect(2) = 1e-31
 Identities = 42/97 (43%), Positives = 62/97 (63%)
 Frame = +2

Query: 41  RKSRIDFDVVLERVSQIMEGWRAKLLSQARKLTLIKAVTSAIPSYMMSVFQLPTSTCNKL 220
           R  +  F+ + ERV + ++GW+ KLLS+A K  LIKAV  AIP++ MS F L  + C+++
Sbjct: 3   RSKKKTFNYLKERVWKKIQGWKEKLLSRAGKDILIKAVAQAIPAFAMSCFDLTKTLCDEI 62

Query: 221 DSLNASFFWRRKEDNTNKVHYISWSKICLPKSSGGWG 331
            SL + FFW  + D  NK+H+I+W K+C     GG G
Sbjct: 63  SSLISRFFW-AQHDRENKMHWIAWDKLCSRTEKGGLG 98



 Score = 77.0 bits (188), Expect(2) = 1e-31
 Identities = 47/144 (32%), Positives = 66/144 (45%)
 Frame = +1

Query: 316 KWGLGIRRASHHNIALQAKLFWRIFKEPDKPRVVSLLKKYVCGNSILRVKCPRRGASKLW 495
           K GLG R     N+A+ A+  WR+    D      L  KY     ++ V+    G S  W
Sbjct: 94  KGGLGYRDLHLFNLAMLARQAWRLLSNLDSLCARVLKAKYFPDGKLMEVR-ESPGISYSW 152

Query: 496 QGILKARDEILPKLCWHIGTGNDIDIWLDPWIPTLPYNKPMRPMPLVGPFRCVADLIDPE 675
           + I++    +   L W +G   DID+W DPWIP     +P  P   +     VADLI+P 
Sbjct: 153 RSIVRGVQVLKVGLIWRVGDSTDIDMWNDPWIPLGTTRRPTTPRRGI-VLNKVADLINPI 211

Query: 676 NCSWKRNVLDTIFLPATVKEILKV 747
              W R ++  IF    VK IL +
Sbjct: 212 TGEWDRELIQDIFWEEDVKNILAI 235


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 82.0 bits (201), Expect(2) = 5e-31
 Identities = 41/97 (42%), Positives = 61/97 (62%)
 Frame = +2

Query: 41  RKSRIDFDVVLERVSQIMEGWRAKLLSQARKLTLIKAVTSAIPSYMMSVFQLPTSTCNKL 220
           R  +  F+ + ERV + ++GW+ KLLS+A K  LIKAV  AIP++ MS F L  +  +++
Sbjct: 3   RSKKKTFNYLKERVWKKIQGWKEKLLSRAGKDILIKAVAQAIPAFAMSCFDLTKTLYDEI 62

Query: 221 DSLNASFFWRRKEDNTNKVHYISWSKICLPKSSGGWG 331
            SL + FFW  + D  NK+H+I+W K+C     GG G
Sbjct: 63  SSLISRFFW-AQHDRENKMHWIAWDKLCSRTEKGGLG 98



 Score = 79.0 bits (193), Expect(2) = 5e-31
 Identities = 48/144 (33%), Positives = 67/144 (46%)
 Frame = +1

Query: 316 KWGLGIRRASHHNIALQAKLFWRIFKEPDKPRVVSLLKKYVCGNSILRVKCPRRGASKLW 495
           K GLG R     N+A+ A   WR+    D      L  KY     ++ V+    G S  W
Sbjct: 94  KGGLGYRDLHLFNLAMLAHQAWRLLSNLDSLCARVLKAKYFPDGKLMEVR-ESPGISYSW 152

Query: 496 QGILKARDEILPKLCWHIGTGNDIDIWLDPWIPTLPYNKPMRPMPLVGPFRCVADLIDPE 675
           + I++    +   L W +G G DID+W DPWIP     +P+ P   +     VADLI+P 
Sbjct: 153 RSIVRGVQVLKVGLIWRVGDGTDIDMWNDPWIPLGTTKRPITPRRGI-VLNKVADLINPI 211

Query: 676 NCSWKRNVLDTIFLPATVKEILKV 747
              W R ++  IF    VK IL +
Sbjct: 212 TGEWDRELIQDIFWEEDVKNILAI 235


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 90.9 bits (224), Expect(2) = 4e-30
 Identities = 44/107 (41%), Positives = 67/107 (62%)
 Frame = +2

Query: 5   HEKYLGAPLILRRKSRIDFDVVLERVSQIMEGWRAKLLSQARKLTLIKAVTSAIPSYMMS 184
           +++YLG P+ + R     F+ + E++ + ++GW+ K LS+A K  LIKAV  AIP+Y MS
Sbjct: 268 NDRYLGLPVFIGRSKAKTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMS 327

Query: 185 VFQLPTSTCNKLDSLNASFFWRRKEDNTNKVHYISWSKICLPKSSGG 325
            F L  S C++L S+   F+W  + DN  K+H++   KI  PKS GG
Sbjct: 328 CFYLTKSLCDELTSMILRFWW-AQHDNDKKIHWLGKDKIMKPKSQGG 373



 Score = 67.0 bits (162), Expect(2) = 4e-30
 Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
 Frame = +1

Query: 301 MLTKIKWGLGIRRASHHNIALQAKLFWRIFKEPDKPRVVSLLKKYVCGNSILRVKCPRRG 480
           M  K + GL  R     NIA+ A+  WR+ + PD      L  KY    ++L  +  R+ 
Sbjct: 366 MKPKSQGGLAFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQS-RKQ 424

Query: 481 ASKLWQGILKARDEILPKLCWHIGTGNDIDIWLDPWIP-TLPYNKPMRPMPLVGPFRCVA 657
            S  W+ ILK    +   + W +G G  I+IW DPW+P  + +    R   L+     V 
Sbjct: 425 MSYSWRSILKGIQLLRKGVIWRVGNGEHINIWSDPWLPRDMRFVTTRRGASLI---TRVC 481

Query: 658 DLIDPENCSWKRNVLDTIFLPATVKEILKV 747
           +LIDP    W   ++  IF     K I ++
Sbjct: 482 ELIDPTTGQWDIELIQQIFNENDAKIITRI 511


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 78.6 bits (192), Expect(2) = 1e-29
 Identities = 37/109 (33%), Positives = 65/109 (59%)
 Frame = +2

Query: 5   HEKYLGAPLILRRKSRIDFDVVLERVSQIMEGWRAKLLSQARKLTLIKAVTSAIPSYMMS 184
           ++KYLG P ++       F  +++RV+  + G + K+LS   K  LIK++  AIP + MS
Sbjct: 565 NDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMS 624

Query: 185 VFQLPTSTCNKLDSLNASFFWRRKEDNTNKVHYISWSKICLPKSSGGWG 331
           VF++P   C+ +    A F+W   ++N  ++H+ +W ++C+PK  GG G
Sbjct: 625 VFRIPKKICDCISEAIARFWW-GDDENHRRIHWKAWWRMCIPKQRGGLG 672



 Score = 77.4 bits (189), Expect(2) = 1e-29
 Identities = 48/148 (32%), Positives = 72/148 (48%)
 Frame = +1

Query: 304  LTKIKWGLGIRRASHHNIALQAKLFWRIFKEPDKPRVVSLLKKYVCGNSILRVKCPRRGA 483
            + K + GLG R     N A+ AK  WR   +PD      +  KY    +ILR + P++G+
Sbjct: 664  IPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRAR-PKKGS 722

Query: 484  SKLWQGILKARDEILPKLCWHIGTGNDIDIWLDPWIPTLPYNKPMRPMPLVGPFRCVADL 663
            S  WQ IL    E      W IG G+ ++IW D  IP+    K + P         V +L
Sbjct: 723  SYAWQSILSG-SECFKGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGR-NIITKVEEL 780

Query: 664  IDPENCSWKRNVLDTIFLPATVKEILKV 747
            I+P +  W  +++DT+F P     IL++
Sbjct: 781  INPVSGGWDEDLIDTLFWPIDANRILQI 808


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 78.6 bits (192), Expect(2) = 1e-29
 Identities = 37/109 (33%), Positives = 65/109 (59%)
 Frame = +2

Query: 5   HEKYLGAPLILRRKSRIDFDVVLERVSQIMEGWRAKLLSQARKLTLIKAVTSAIPSYMMS 184
           ++KYLG P ++       F  +++RV+  + G + K+LS   K  LIK++  AIP + MS
Sbjct: 565 NDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMS 624

Query: 185 VFQLPTSTCNKLDSLNASFFWRRKEDNTNKVHYISWSKICLPKSSGGWG 331
           VF++P   C+ +    A F+W   ++N  ++H+ +W ++C+PK  GG G
Sbjct: 625 VFRIPKKICDCISEAIARFWW-GDDENHRRIHWKAWWRMCIPKQRGGLG 672



 Score = 77.4 bits (189), Expect(2) = 1e-29
 Identities = 48/148 (32%), Positives = 72/148 (48%)
 Frame = +1

Query: 304  LTKIKWGLGIRRASHHNIALQAKLFWRIFKEPDKPRVVSLLKKYVCGNSILRVKCPRRGA 483
            + K + GLG R     N A+ AK  WR   +PD      +  KY    +ILR + P++G+
Sbjct: 664  IPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCARVMRCKYYPDGNILRAR-PKKGS 722

Query: 484  SKLWQGILKARDEILPKLCWHIGTGNDIDIWLDPWIPTLPYNKPMRPMPLVGPFRCVADL 663
            S  WQ IL    E      W IG G+ ++IW D  IP+    K + P         V +L
Sbjct: 723  SYAWQSILSG-SECFKGYIWRIGDGSQVNIWEDSLIPSSSNGKVLTPRGR-NIITKVEEL 780

Query: 664  IDPENCSWKRNVLDTIFLPATVKEILKV 747
            I+P +  W  +++DT+F P     IL++
Sbjct: 781  INPVSGGWDEDLIDTLFWPIDANRILQI 808