BLASTX nr result
ID: Coptis25_contig00003929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003929 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 106 2e-21 gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 102 2e-20 gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 102 2e-20 ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S... 102 4e-20 emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 101 5e-20 >emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1362 Score = 106 bits (264), Expect = 2e-21 Identities = 52/122 (42%), Positives = 76/122 (62%) Frame = +2 Query: 20 EFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMSV 199 E +LG P I R ++ F + ER++++++GW+ KLLS+ K LIK+V I +YMMSV Sbjct: 751 EKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSV 810 Query: 200 FQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAFQ 379 F LP+ +++ SL A F+WG D K+H+ SW+ +C PKS GGLG R N + Sbjct: 811 FSLPSGLIDEIHSLLARFWWG-SSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLL 869 Query: 380 AK 385 AK Sbjct: 870 AK 871 >gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 102 bits (255), Expect = 2e-20 Identities = 50/124 (40%), Positives = 77/124 (62%) Frame = +2 Query: 14 THEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMM 193 T+E +LG P+ R F + ER++QR++GW+ KLLS+A K LIKAV VI ++ M Sbjct: 947 TNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAM 1006 Query: 194 SVFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIA 373 F+L C+++ + A ++W ++ NK+H++SWN + LPK+ GGLG R N+A Sbjct: 1007 GCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1065 Query: 374 FQAK 385 AK Sbjct: 1066 MLAK 1069 >gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1505 Score = 102 bits (255), Expect = 2e-20 Identities = 50/124 (40%), Positives = 77/124 (62%) Frame = +2 Query: 14 THEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMM 193 T+E +LG P+ R F + ER++QR++GW+ KLLS+A K LIKAV VI ++ M Sbjct: 943 TNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAM 1002 Query: 194 SVFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIA 373 F+L C+++ + A ++W ++ NK+H++SWN + LPK+ GGLG R N+A Sbjct: 1003 GCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1061 Query: 374 FQAK 385 AK Sbjct: 1062 MLAK 1065 >ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor] gi|241922442|gb|EER95586.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor] Length = 517 Score = 102 bits (253), Expect = 4e-20 Identities = 49/122 (40%), Positives = 75/122 (61%) Frame = +2 Query: 20 EFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMSV 199 E +LG P+ + + F+ + +R++ R++GW+ KLLS+A K LIKAV I +Y MS Sbjct: 172 EKYLGGPISTGKSRKKAFEYIKQRIWARIQGWQEKLLSKAGKEILIKAVAQAIPTYAMSY 231 Query: 200 FQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAFQ 379 F L S C+ L S+ ++W ++D TNK+H++SW + L K GGLG R H N+A Sbjct: 232 FNLTKSFCDDLSSMVGRYWWS-EQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAML 290 Query: 380 AK 385 A+ Sbjct: 291 AR 292 >emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1357 Score = 101 bits (252), Expect = 5e-20 Identities = 47/123 (38%), Positives = 77/123 (62%) Frame = +2 Query: 17 HEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMS 196 H+ +LG P + R ++ F E+L+R+++++ GW+ KLLS+A K LIKAV + +Y+M Sbjct: 754 HQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMG 813 Query: 197 VFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAF 376 V++LP + ++ S A F+WG K D K+H++SW +C PK GG+G + + N A Sbjct: 814 VYKLPVAVIQEIHSAMARFWWGGKGDE-RKMHWLSWEKMCKPKCMGGMGFKDLAVFNDAL 872 Query: 377 QAK 385 K Sbjct: 873 LGK 875