BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003929
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   106   2e-21
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   102   2e-20
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   102   2e-20
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   102   4e-20
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   101   5e-20

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/122 (42%), Positives = 76/122 (62%)
 Frame = +2

Query: 20   EFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMSV 199
            E +LG P I  R  ++ F  + ER++++++GW+ KLLS+  K  LIK+V   I +YMMSV
Sbjct: 751  EKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSV 810

Query: 200  FQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAFQ 379
            F LP+   +++ SL A F+WG   D   K+H+ SW+ +C PKS GGLG R     N +  
Sbjct: 811  FSLPSGLIDEIHSLLARFWWG-SSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLL 869

Query: 380  AK 385
            AK
Sbjct: 870  AK 871


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/124 (40%), Positives = 77/124 (62%)
 Frame = +2

Query: 14   THEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMM 193
            T+E +LG P+   R     F  + ER++QR++GW+ KLLS+A K  LIKAV  VI ++ M
Sbjct: 947  TNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAM 1006

Query: 194  SVFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIA 373
              F+L    C+++  + A ++W   ++  NK+H++SWN + LPK+ GGLG R     N+A
Sbjct: 1007 GCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1065

Query: 374  FQAK 385
              AK
Sbjct: 1066 MLAK 1069


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/124 (40%), Positives = 77/124 (62%)
 Frame = +2

Query: 14   THEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMM 193
            T+E +LG P+   R     F  + ER++QR++GW+ KLLS+A K  LIKAV  VI ++ M
Sbjct: 943  TNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAM 1002

Query: 194  SVFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIA 373
              F+L    C+++  + A ++W   ++  NK+H++SWN + LPK+ GGLG R     N+A
Sbjct: 1003 GCFELTKDLCDQISKMIAKYWWS-NQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1061

Query: 374  FQAK 385
              AK
Sbjct: 1062 MLAK 1065


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/122 (40%), Positives = 75/122 (61%)
 Frame = +2

Query: 20  EFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMSV 199
           E +LG P+   +  +  F+ + +R++ R++GW+ KLLS+A K  LIKAV   I +Y MS 
Sbjct: 172 EKYLGGPISTGKSRKKAFEYIKQRIWARIQGWQEKLLSKAGKEILIKAVAQAIPTYAMSY 231

Query: 200 FQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAFQ 379
           F L  S C+ L S+   ++W  ++D TNK+H++SW  + L K  GGLG R   H N+A  
Sbjct: 232 FNLTKSFCDDLSSMVGRYWWS-EQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAML 290

Query: 380 AK 385
           A+
Sbjct: 291 AR 292


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/123 (38%), Positives = 77/123 (62%)
 Frame = +2

Query: 17   HEFFLGAPLIFRRKSRIDFDEVLERVFQRMEGWRAKLLSQASKLTLIKAVTSVILSYMMS 196
            H+ +LG P +  R  ++ F E+L+R+++++ GW+ KLLS+A K  LIKAV   + +Y+M 
Sbjct: 754  HQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMG 813

Query: 197  VFQLPTSTCNKLDSLNASFFWG*KKDNTNKVHYISWNNICLPKSSGGLGIRRASHHNIAF 376
            V++LP +   ++ S  A F+WG K D   K+H++SW  +C PK  GG+G +  +  N A 
Sbjct: 814  VYKLPVAVIQEIHSAMARFWWGGKGDE-RKMHWLSWEKMCKPKCMGGMGFKDLAVFNDAL 872

Query: 377  QAK 385
              K
Sbjct: 873  LGK 875