BLASTX nr result

ID: Coptis25_contig00003919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003919
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO33056.1| hypothetical protein [Amblyomma maculatum]             349   4e-94
gb|AFK40877.1| unknown [Medicago truncatula]                          344   2e-92
ref|XP_003638089.1| 40S ribosomal protein S5 [Medicago truncatul...   344   2e-92
gb|AFK48366.1| unknown [Medicago truncatula]                          342   6e-92
ref|XP_003578829.1| PREDICTED: 40S ribosomal protein S5-1-like [...   342   6e-92

>gb|AEO33056.1| hypothetical protein [Amblyomma maculatum]
          Length = 216

 Score =  349 bits (896), Expect = 4e-94
 Identities = 176/197 (89%), Positives = 185/197 (93%)
 Frame = +1

Query: 58  MAEVVAANEVKLFNRWAFDGVEVGDLSLQDYIGATGKHATYLPHTAGRYSAKRFRKAQCP 237
           +  V A ++VKLFNRW+F+ V V D+SL DYIG  GKHATYLPHTAGRYSAKRFRKAQCP
Sbjct: 20  LTAVEATSDVKLFNRWSFEDVSVTDISLSDYIGVAGKHATYLPHTAGRYSAKRFRKAQCP 79

Query: 238 IVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLNDQNPIQVIVDAVQNSGPREDATR 417
           IVERLTNSLMMHGRNNGKKLMAVRIVKHAME+IHLL DQNPIQVIVDAV NSGPREDATR
Sbjct: 80  IVERLTNSLMMHGRNNGKKLMAVRIVKHAMELIHLLTDQNPIQVIVDAVINSGPREDATR 139

Query: 418 IGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESSFRNIKSIAECLADELINAAKGSSNS 597
           IGSAGVVRRQAVDISPLRRVNQA+YLLTTGARESSFRNIK+IAECLADELINAAKGSSNS
Sbjct: 140 IGSAGVVRRQAVDISPLRRVNQALYLLTTGARESSFRNIKTIAECLADELINAAKGSSNS 199

Query: 598 YAIKKKDEIERVAKANR 648
           YAIKKKDEIERVAKANR
Sbjct: 200 YAIKKKDEIERVAKANR 216


>gb|AFK40877.1| unknown [Medicago truncatula]
          Length = 206

 Score =  344 bits (882), Expect = 2e-92
 Identities = 172/190 (90%), Positives = 182/190 (95%)
 Frame = +1

Query: 79  NEVKLFNRWAFDGVEVGDLSLQDYIGATGKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 258
           NEVKLFN+W+FD +++ DLSL DYIGA  KHATY+PHTAGRYS KRFRKAQCPIVERLTN
Sbjct: 17  NEVKLFNQWSFDDLQITDLSLGDYIGARSKHATYVPHTAGRYSKKRFRKAQCPIVERLTN 76

Query: 259 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLNDQNPIQVIVDAVQNSGPREDATRIGSAGVV 438
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL DQNPIQVIVDAV NSGPREDATRIGSAGVV
Sbjct: 77  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 136

Query: 439 RRQAVDISPLRRVNQAIYLLTTGARESSFRNIKSIAECLADELINAAKGSSNSYAIKKKD 618
           RRQAVDISPLRRVNQAIYLLTTGARE++FRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196

Query: 619 EIERVAKANR 648
           EIERVAKANR
Sbjct: 197 EIERVAKANR 206


>ref|XP_003638089.1| 40S ribosomal protein S5 [Medicago truncatula]
           gi|355504024|gb|AES85227.1| 40S ribosomal protein S5
           [Medicago truncatula]
          Length = 248

 Score =  344 bits (882), Expect = 2e-92
 Identities = 172/190 (90%), Positives = 182/190 (95%)
 Frame = +1

Query: 79  NEVKLFNRWAFDGVEVGDLSLQDYIGATGKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 258
           NEVKLFN+W+FD +++ DLSL DYIGA  KHATY+PHTAGRYS KRFRKAQCPIVERLTN
Sbjct: 59  NEVKLFNQWSFDDLQITDLSLGDYIGARSKHATYVPHTAGRYSKKRFRKAQCPIVERLTN 118

Query: 259 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLNDQNPIQVIVDAVQNSGPREDATRIGSAGVV 438
           SLMMHGRNNGKKLMAVRI+KHAMEIIHLL DQNPIQVIVDAV NSGPREDATRIGSAGVV
Sbjct: 119 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 178

Query: 439 RRQAVDISPLRRVNQAIYLLTTGARESSFRNIKSIAECLADELINAAKGSSNSYAIKKKD 618
           RRQAVDISPLRRVNQAIYLLTTGARE++FRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 179 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 238

Query: 619 EIERVAKANR 648
           EIERVAKANR
Sbjct: 239 EIERVAKANR 248


>gb|AFK48366.1| unknown [Medicago truncatula]
          Length = 207

 Score =  342 bits (877), Expect = 6e-92
 Identities = 172/189 (91%), Positives = 180/189 (95%)
 Frame = +1

Query: 82  EVKLFNRWAFDGVEVGDLSLQDYIGATGKHATYLPHTAGRYSAKRFRKAQCPIVERLTNS 261
           EVKLFNRW+FD V++ DLSL DYIGA  KHATY+PHTAGRYS KRFRKAQCPIVERLTNS
Sbjct: 19  EVKLFNRWSFDDVQITDLSLGDYIGARSKHATYVPHTAGRYSKKRFRKAQCPIVERLTNS 78

Query: 262 LMMHGRNNGKKLMAVRIVKHAMEIIHLLNDQNPIQVIVDAVQNSGPREDATRIGSAGVVR 441
           LMMHGRNNGKKLMAVRI+KHAMEIIHLL DQNPIQVIVDAV NSGPREDATRIG AGVVR
Sbjct: 79  LMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGFAGVVR 138

Query: 442 RQAVDISPLRRVNQAIYLLTTGARESSFRNIKSIAECLADELINAAKGSSNSYAIKKKDE 621
           RQAVDISPLRRVNQAIYLLTTGARE++FRNIK+IAECLADELINAAKGSSNSYAIKKKDE
Sbjct: 139 RQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 198

Query: 622 IERVAKANR 648
           IERVAKANR
Sbjct: 199 IERVAKANR 207


>ref|XP_003578829.1| PREDICTED: 40S ribosomal protein S5-1-like [Brachypodium
           distachyon]
          Length = 199

 Score =  342 bits (877), Expect = 6e-92
 Identities = 172/194 (88%), Positives = 182/194 (93%), Gaps = 1/194 (0%)
 Frame = +1

Query: 70  VAANEVKLFNRWAFDGVEVGDLSLQDYIGAT-GKHATYLPHTAGRYSAKRFRKAQCPIVE 246
           V  N+VKLFNRW+FDGVEV D+SL DYIG    KHATYLPHTAGRYSAKRFRKAQCPI+E
Sbjct: 6   VPTNDVKLFNRWSFDGVEVQDISLNDYIGVNPDKHATYLPHTAGRYSAKRFRKAQCPIIE 65

Query: 247 RLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLNDQNPIQVIVDAVQNSGPREDATRIGS 426
           RLTNSLMMHGRNNGKKLMAVRI++H MEIIHLL D NPIQVIVDA+ NSGPREDATRIGS
Sbjct: 66  RLTNSLMMHGRNNGKKLMAVRIIQHTMEIIHLLTDANPIQVIVDAIINSGPREDATRIGS 125

Query: 427 AGVVRRQAVDISPLRRVNQAIYLLTTGARESSFRNIKSIAECLADELINAAKGSSNSYAI 606
           AGVVRRQAVDISPLRRVNQAIYLLTTGARES+FRN+K+IAECLADELINAAKGSSNSYAI
Sbjct: 126 AGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECLADELINAAKGSSNSYAI 185

Query: 607 KKKDEIERVAKANR 648
           KKKDEIERVAKANR
Sbjct: 186 KKKDEIERVAKANR 199


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