BLASTX nr result

ID: Coptis25_contig00003916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003916
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [...   213   2e-53
ref|NP_001066387.1| Os12g0207300 [Oryza sativa Japonica Group] g...   213   2e-53
ref|XP_002510527.1| clathrin coat assembly protein ap17, putativ...   213   2e-53
gb|EAZ19968.1| hypothetical protein OsJ_35559 [Oryza sativa Japo...   213   2e-53
gb|EAY82574.1| hypothetical protein OsI_37796 [Oryza sativa Indi...   213   2e-53

>ref|XP_004136383.1| PREDICTED: AP-2 complex subunit sigma-like [Cucumis sativus]
           gi|449505752|ref|XP_004162559.1| PREDICTED: AP-2 complex
           subunit sigma-like [Cucumis sativus]
          Length = 142

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 106 EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 285
           EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFS+CVDITDNELAYLECIHL
Sbjct: 27  EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHL 86

Query: 286 FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 414
           FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK
Sbjct: 87  FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 129


>ref|NP_001066387.1| Os12g0207300 [Oryza sativa Japonica Group]
           gi|242085198|ref|XP_002443024.1| hypothetical protein
           SORBIDRAFT_08g006500 [Sorghum bicolor]
           gi|17149110|gb|AAL35901.1|AF443601_1 clathrin assembly
           protein AP17-like protein [Oryza sativa]
           gi|77553342|gb|ABA96138.1| Clathrin coat assembly
           protein AP17, putative, expressed [Oryza sativa Japonica
           Group] gi|113648894|dbj|BAF29406.1| Os12g0207300 [Oryza
           sativa Japonica Group] gi|215697333|dbj|BAG91327.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|241943717|gb|EES16862.1| hypothetical protein
           SORBIDRAFT_08g006500 [Sorghum bicolor]
          Length = 142

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 106 EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 285
           EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL
Sbjct: 27  EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 86

Query: 286 FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 414
           FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSK+
Sbjct: 87  FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKR 129


>ref|XP_002510527.1| clathrin coat assembly protein ap17, putative [Ricinus communis]
           gi|223551228|gb|EEF52714.1| clathrin coat assembly
           protein ap17, putative [Ricinus communis]
          Length = 142

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 106 EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 285
           EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFS+CVDITDNELAYLECIHL
Sbjct: 27  EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHL 86

Query: 286 FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 414
           FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK
Sbjct: 87  FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 129


>gb|EAZ19968.1| hypothetical protein OsJ_35559 [Oryza sativa Japonica Group]
          Length = 151

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 106 EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 285
           EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL
Sbjct: 36  EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 95

Query: 286 FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 414
           FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSK+
Sbjct: 96  FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKR 138


>gb|EAY82574.1| hypothetical protein OsI_37796 [Oryza sativa Indica Group]
          Length = 151

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/103 (99%), Positives = 103/103 (100%)
 Frame = +1

Query: 106 EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 285
           EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL
Sbjct: 36  EKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRRYAGLFFSMCVDITDNELAYLECIHL 95

Query: 286 FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKK 414
           FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSK+
Sbjct: 96  FVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKR 138


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