BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003907
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...    94   6e-17
emb|CBI16056.3| unnamed protein product [Vitis vinifera]               93   1e-16
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...    93   1e-16
ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation...    92   1e-16

>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 73/207 (35%), Positives = 99/207 (47%), Gaps = 35/207 (16%)
 Frame = -2

Query: 705 RDWSKCGDF----GGPRKDVDAATREELRRQRRTKTYVP-TPITVEQGMDIIKDGVTVRV 541
           R+WSK GD      G R  + +     L R R        T I  +    + K G  + V
Sbjct: 82  RNWSKFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLAQLGKGGAVLMV 141

Query: 540 CRYCCQKLDHDYAVCPSRDLSPLP---LYPPPGAKIL-----------VPPL-------- 427
           CR C +K DH  + CP +DL+  P   +  PP  +             VPP         
Sbjct: 142 CRTCGKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERT 201

Query: 426 ---NIKENARNNSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFARF 256
              +++     NSV + +LS+D R+ DLL+LF  FG VS+V VA+ +KTGVS G GF  F
Sbjct: 202 VGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNF 261

Query: 255 ESIDDAERAMNNLNADGY-----HIEW 190
            S +DAERA+N LN  GY      +EW
Sbjct: 262 VSKEDAERAINKLNGYGYDNLILRVEW 288


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 36/208 (17%)
 Frame = -2

Query: 705 RDWSKCGDFGGPRKDVDA-----ATREELRRQRRT--KTYVPTPITVEQGMDIIKDGVTV 547
           R W+K GD     +DV +     +T E L  + R        + +  +    + K G  +
Sbjct: 85  RSWAKFGD--AVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLAQLGKGGAVL 142

Query: 546 RVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVP 433
            VCR C +K DH  + CP +DL+P                         Y PPG +    
Sbjct: 143 MVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAE 202

Query: 432 PLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFAR 259
               +   RN  NSV + +LS+D R+ DL +LF  FGPVS+V VA+ +KTG+S G GF  
Sbjct: 203 RTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVN 262

Query: 258 FESIDDAERAMNNLNADGY-----HIEW 190
           F + +DAERA+N LN  GY      +EW
Sbjct: 263 FVNKEDAERAINKLNGYGYDNLILRVEW 290


>emb|CBI16056.3| unnamed protein product [Vitis vinifera]
          Length = 193

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
 Frame = -2

Query: 564 KDGVTVRVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPG 451
           K G  + VCR C +K DH  + CP +DL+P                         Y PPG
Sbjct: 34  KGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPG 93

Query: 450 AKILVPPLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSL 277
            +        +   RN  NSV + +LS+D R+ DL +LF  FGPVS+V VA+ +KTG+S 
Sbjct: 94  MRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSR 153

Query: 276 GVGFARFESIDDAERAMNNLNADGY-----HIEW 190
           G GF  F + +DAERA+N LN  GY      +EW
Sbjct: 154 GFGFVNFVNKEDAERAINKLNGYGYDNLILRVEW 187


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 71/206 (34%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
 Frame = -2

Query: 705 RDWSKCGDFG----GPRKDVDAATREELRRQRRTKTYVP-TPITVEQGMDIIKDGVTVRV 541
           R W+K GD      G R  + +     L R R   T    T I  +    + K G  + V
Sbjct: 90  RSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLAQLGKGGAVLMV 149

Query: 540 CRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVPPL 427
           CR C +K DH  + CP +DL+                          Y PPG +     +
Sbjct: 150 CRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERV 209

Query: 426 NIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFARFE 253
                 RN  NSV + +LS+D R+ DL +LF  FGPVS+V VA+ +KTG+S G GF  F 
Sbjct: 210 GSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFV 269

Query: 252 SIDDAERAMNNLNADGY-----HIEW 190
           + +DAERA+N LN  GY      +EW
Sbjct: 270 NKEDAERAINKLNGYGYDNLILRVEW 295


>ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like [Cucumis sativus]
           gi|449507153|ref|XP_004162947.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit G-like [Cucumis
           sativus]
          Length = 289

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 71/208 (34%), Positives = 98/208 (47%), Gaps = 36/208 (17%)
 Frame = -2

Query: 705 RDWSKCGDFGGPRKDVDA-----ATREELRRQRRTKTYVPTPITV--EQGMDIIKDGVTV 547
           R W+K GD     +DV +     +T E L  + R     P    V  +    + K G  +
Sbjct: 78  RSWAKFGD--AVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVL 135

Query: 546 RVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVP 433
            VCR C +K DH  + CP +DL+P                         Y PPG +    
Sbjct: 136 MVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGATKGTYVPPGMRAGAD 195

Query: 432 PLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFAR 259
                   RN  NSV + +LS+D R+ DLL+LF  FG VS+V VA+ +KTG+S G GF  
Sbjct: 196 RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVN 255

Query: 258 FESIDDAERAMNNLNADGY-----HIEW 190
           F + +DA+RA+N LN  GY      +EW
Sbjct: 256 FVNREDAQRAINKLNGYGYDNLILRVEW 283