BLASTX nr result
ID: Coptis25_contig00003907
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003907 (919 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2... 95 2e-17 ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation... 94 6e-17 emb|CBI16056.3| unnamed protein product [Vitis vinifera] 93 1e-16 ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation... 93 1e-16 ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation... 92 1e-16 >ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1| predicted protein [Populus trichocarpa] Length = 294 Score = 95.1 bits (235), Expect = 2e-17 Identities = 73/207 (35%), Positives = 99/207 (47%), Gaps = 35/207 (16%) Frame = -2 Query: 705 RDWSKCGDF----GGPRKDVDAATREELRRQRRTKTYVP-TPITVEQGMDIIKDGVTVRV 541 R+WSK GD G R + + L R R T I + + K G + V Sbjct: 82 RNWSKFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLAQLGKGGAVLMV 141 Query: 540 CRYCCQKLDHDYAVCPSRDLSPLP---LYPPPGAKIL-----------VPPL-------- 427 CR C +K DH + CP +DL+ P + PP + VPP Sbjct: 142 CRTCGKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYVPPSMRAGAERT 201 Query: 426 ---NIKENARNNSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFARF 256 +++ NSV + +LS+D R+ DLL+LF FG VS+V VA+ +KTGVS G GF F Sbjct: 202 VGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKTGVSRGFGFVNF 261 Query: 255 ESIDDAERAMNNLNADGY-----HIEW 190 S +DAERA+N LN GY +EW Sbjct: 262 VSKEDAERAINKLNGYGYDNLILRVEW 288 >ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B [Vitis vinifera] Length = 296 Score = 93.6 bits (231), Expect = 6e-17 Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 36/208 (17%) Frame = -2 Query: 705 RDWSKCGDFGGPRKDVDA-----ATREELRRQRRT--KTYVPTPITVEQGMDIIKDGVTV 547 R W+K GD +DV + +T E L + R + + + + K G + Sbjct: 85 RSWAKFGD--AVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSLAQLGKGGAVL 142 Query: 546 RVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVP 433 VCR C +K DH + CP +DL+P Y PPG + Sbjct: 143 MVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPGMRAGAE 202 Query: 432 PLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFAR 259 + RN NSV + +LS+D R+ DL +LF FGPVS+V VA+ +KTG+S G GF Sbjct: 203 RTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSRGFGFVN 262 Query: 258 FESIDDAERAMNNLNADGY-----HIEW 190 F + +DAERA+N LN GY +EW Sbjct: 263 FVNKEDAERAINKLNGYGYDNLILRVEW 290 >emb|CBI16056.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 92.8 bits (229), Expect = 1e-16 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 29/154 (18%) Frame = -2 Query: 564 KDGVTVRVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPG 451 K G + VCR C +K DH + CP +DL+P Y PPG Sbjct: 34 KGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTYVPPG 93 Query: 450 AKILVPPLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSL 277 + + RN NSV + +LS+D R+ DL +LF FGPVS+V VA+ +KTG+S Sbjct: 94 MRAGAERTGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQKTGMSR 153 Query: 276 GVGFARFESIDDAERAMNNLNADGY-----HIEW 190 G GF F + +DAERA+N LN GY +EW Sbjct: 154 GFGFVNFVNKEDAERAINKLNGYGYDNLILRVEW 187 >ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B [Vitis vinifera] Length = 301 Score = 92.8 bits (229), Expect = 1e-16 Identities = 71/206 (34%), Positives = 96/206 (46%), Gaps = 34/206 (16%) Frame = -2 Query: 705 RDWSKCGDFG----GPRKDVDAATREELRRQRRTKTYVP-TPITVEQGMDIIKDGVTVRV 541 R W+K GD G R + + L R R T T I + + K G + V Sbjct: 90 RSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLAQLGKGGAVLMV 149 Query: 540 CRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVPPL 427 CR C +K DH + CP +DL+ Y PPG + + Sbjct: 150 CRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKAAYVPPGMRPGAERV 209 Query: 426 NIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFARFE 253 RN NSV + +LS+D R+ DL +LF FGPVS+V VA+ +KTG+S G GF F Sbjct: 210 GSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKTGMSRGFGFVNFV 269 Query: 252 SIDDAERAMNNLNADGY-----HIEW 190 + +DAERA+N LN GY +EW Sbjct: 270 NKEDAERAINKLNGYGYDNLILRVEW 295 >ref|XP_004137389.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus] gi|449507153|ref|XP_004162947.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-like [Cucumis sativus] Length = 289 Score = 92.4 bits (228), Expect = 1e-16 Identities = 71/208 (34%), Positives = 98/208 (47%), Gaps = 36/208 (17%) Frame = -2 Query: 705 RDWSKCGDFGGPRKDVDA-----ATREELRRQRRTKTYVPTPITV--EQGMDIIKDGVTV 547 R W+K GD +DV + +T E L + R P V + + K G + Sbjct: 78 RSWAKFGD--AVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVL 135 Query: 546 RVCRYCCQKLDHDYAVCPSRDLSPLP----------------------LYPPPGAKILVP 433 VCR C +K DH + CP +DL+P Y PPG + Sbjct: 136 MVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKATAPEAAAAAPGGATKGTYVPPGMRAGAD 195 Query: 432 PLNIKENARN--NSVIIKSLSKDIRDNDLLKLFTDFGPVSKVRVAMYKKTGVSLGVGFAR 259 RN NSV + +LS+D R+ DLL+LF FG VS+V VA+ +KTG+S G GF Sbjct: 196 RTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVN 255 Query: 258 FESIDDAERAMNNLNADGY-----HIEW 190 F + +DA+RA+N LN GY +EW Sbjct: 256 FVNREDAQRAINKLNGYGYDNLILRVEW 283