BLASTX nr result

ID: Coptis25_contig00003902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003902
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272727.1| PREDICTED: 60S ribosomal protein L19-2 [Viti...   330   3e-88
ref|XP_002272357.1| PREDICTED: 60S ribosomal protein L19-2 [Viti...   330   3e-88
ref|NP_001237389.1| uncharacterized protein LOC100527275 [Glycin...   330   3e-88
ref|NP_001237991.1| uncharacterized protein LOC100499920 [Glycin...   330   5e-88
ref|NP_001241295.1| uncharacterized protein LOC100818880 [Glycin...   328   1e-87

>ref|XP_002272727.1| PREDICTED: 60S ribosomal protein L19-2 [Vitis vinifera]
           gi|296083322|emb|CBI22958.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  330 bits (847), Expect = 3e-88
 Identities = 169/188 (89%), Positives = 172/188 (91%)
 Frame = -1

Query: 967 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 788
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 787 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYRESKKIDKHMY 608
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK              RKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 607 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 428
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREER 180

Query: 427 LVQGPVDR 404
           L QGPV+R
Sbjct: 181 LAQGPVER 188


>ref|XP_002272357.1| PREDICTED: 60S ribosomal protein L19-2 [Vitis vinifera]
          Length = 208

 Score =  330 bits (847), Expect = 3e-88
 Identities = 170/188 (90%), Positives = 171/188 (90%)
 Frame = -1

Query: 967 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 788
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 787 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYRESKKIDKHMY 608
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK              RKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 607 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 428
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 427 LVQGPVDR 404
           L QGP +R
Sbjct: 181 LAQGPAER 188


>ref|NP_001237389.1| uncharacterized protein LOC100527275 [Glycine max]
           gi|255631934|gb|ACU16334.1| unknown [Glycine max]
          Length = 212

 Score =  330 bits (846), Expect = 3e-88
 Identities = 169/188 (89%), Positives = 172/188 (91%)
 Frame = -1

Query: 967 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 788
           MVSLKLQKRL+ASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 787 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYRESKKIDKHMY 608
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK              RKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 607 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 428
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 427 LVQGPVDR 404
           L QGPVD+
Sbjct: 181 LAQGPVDK 188


>ref|NP_001237991.1| uncharacterized protein LOC100499920 [Glycine max]
           gi|255627687|gb|ACU14188.1| unknown [Glycine max]
          Length = 212

 Score =  330 bits (845), Expect = 5e-88
 Identities = 169/188 (89%), Positives = 172/188 (91%)
 Frame = -1

Query: 967 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 788
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 787 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYRESKKIDKHMY 608
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK              RKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 607 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 428
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180

Query: 427 LVQGPVDR 404
           L QGP +R
Sbjct: 181 LAQGPGER 188


>ref|NP_001241295.1| uncharacterized protein LOC100818880 [Glycine max]
           gi|255647307|gb|ACU24120.1| unknown [Glycine max]
          Length = 212

 Score =  328 bits (842), Expect = 1e-87
 Identities = 168/188 (89%), Positives = 172/188 (91%)
 Frame = -1

Query: 967 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 788
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 787 SRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYRESKKIDKHMY 608
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTK              RKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 607 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 428
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180

Query: 427 LVQGPVDR 404
           L QGP +R
Sbjct: 181 LAQGPGER 188


Top