BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003900
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera] gi|...   225   6e-57
ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|g...   217   2e-54
ref|XP_002320737.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-bi...   215   6e-54
ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]             214   1e-53

>ref|XP_003633914.1| PREDICTED: spastin-like [Vitis vinifera]
           gi|296089089|emb|CBI38792.3| unnamed protein product
           [Vitis vinifera]
          Length = 491

 Score =  225 bits (574), Expect = 6e-57
 Identities = 116/133 (87%), Positives = 118/133 (88%)
 Frame = -1

Query: 683 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 504
           LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRR       KGQAFSLPG DLE LV
Sbjct: 357 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRLLLKHKLKGQAFSLPGGDLERLV 416

Query: 503 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYTDFQIAMTVIRPSLQKS 324
           +ETEGYSGSDLQALCEEAAMMPIRELG+NILTV ANQVRPLRY DFQ AMTVIRPSLQK 
Sbjct: 417 QETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQVRPLRYGDFQKAMTVIRPSLQKG 476

Query: 323 KWDELEKWNQEFG 285
           KW ELE WNQEFG
Sbjct: 477 KWQELEDWNQEFG 489


>ref|XP_003623772.1| Spastin [Medicago truncatula] gi|355498787|gb|AES79990.1| Spastin
           [Medicago truncatula]
          Length = 486

 Score =  217 bits (553), Expect = 2e-54
 Identities = 110/133 (82%), Positives = 118/133 (88%)
 Frame = -1

Query: 683 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 504
           +VIVIGATNKPQELDDAVLRRLVKRIYVPLP+ENVR+       KGQAFSLP RDLE LV
Sbjct: 352 IVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLV 411

Query: 503 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYTDFQIAMTVIRPSLQKS 324
           +ETEGYSGSDLQALCEEAAMMPIRELGSNILTV ANQVR LRY DF+ AM VIRPSL KS
Sbjct: 412 RETEGYSGSDLQALCEEAAMMPIRELGSNILTVKANQVRGLRYEDFKKAMAVIRPSLNKS 471

Query: 323 KWDELEKWNQEFG 285
           KW+ELE+WN+EFG
Sbjct: 472 KWEELERWNEEFG 484


>ref|XP_002320737.1| predicted protein [Populus trichocarpa] gi|222861510|gb|EEE99052.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  217 bits (553), Expect = 2e-54
 Identities = 110/133 (82%), Positives = 117/133 (87%)
 Frame = -1

Query: 683 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 504
           LVIVIGATNKPQELDDAVLRRLVKRIYVPLPD NVRR       KG+AFSLPG DLE LV
Sbjct: 159 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDGNVRRVLLKHKLKGRAFSLPGGDLEKLV 218

Query: 503 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYTDFQIAMTVIRPSLQKS 324
           +ETEGYSGSDLQALCEEAAMMPIRELG+NILTV ANQVRPLRY DFQ A+ VIRPSL KS
Sbjct: 219 RETEGYSGSDLQALCEEAAMMPIRELGANILTVKANQVRPLRYEDFQKALAVIRPSLSKS 278

Query: 323 KWDELEKWNQEFG 285
           KW +LE+WN+EFG
Sbjct: 279 KWGDLERWNEEFG 291


>gb|AAL25088.1|AF426837_1 Tobacco mosaic virus helicase domain-binding protein [Nicotiana
           tabacum]
          Length = 537

 Score =  215 bits (548), Expect = 6e-54
 Identities = 109/133 (81%), Positives = 119/133 (89%)
 Frame = -1

Query: 683 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 504
           LVIVIGATNKPQELDDAVLRRLVKRIY+PLPD NVRR       KG+AFSLPG DL+ LV
Sbjct: 403 LVIVIGATNKPQELDDAVLRRLVKRIYIPLPDANVRRQLLKHRLKGKAFSLPGGDLDRLV 462

Query: 503 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYTDFQIAMTVIRPSLQKS 324
           ++TEGYSGSDLQALCEEAAMMPIRELG+NIL V+A+QVR LRY DFQ AMTVIRPSLQKS
Sbjct: 463 RDTEGYSGSDLQALCEEAAMMPIRELGANILRVDADQVRGLRYGDFQKAMTVIRPSLQKS 522

Query: 323 KWDELEKWNQEFG 285
           KW+ELE+WNQEFG
Sbjct: 523 KWEELERWNQEFG 535


>ref|XP_003552348.1| PREDICTED: spastin-like [Glycine max]
          Length = 491

 Score =  214 bits (545), Expect = 1e-53
 Identities = 107/133 (80%), Positives = 117/133 (87%)
 Frame = -1

Query: 683 LVIVIGATNKPQELDDAVLRRLVKRIYVPLPDENVRRXXXXXXXKGQAFSLPGRDLESLV 504
           +VIVIGATNKPQELDDAVLRRLVKRIY+PLPDENVR+       KGQAFSLP RDLE LV
Sbjct: 357 IVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRKLLLKHKLKGQAFSLPSRDLERLV 416

Query: 503 KETEGYSGSDLQALCEEAAMMPIRELGSNILTVNANQVRPLRYTDFQIAMTVIRPSLQKS 324
           KETEGYSGSDLQALCEEAAMMPIRELG++ILTV ANQVR LRY DF+ AM  IRPSL KS
Sbjct: 417 KETEGYSGSDLQALCEEAAMMPIRELGADILTVKANQVRGLRYEDFKKAMATIRPSLNKS 476

Query: 323 KWDELEKWNQEFG 285
           KW+ELE+WN++FG
Sbjct: 477 KWEELERWNEDFG 489