BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003899
         (1870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40774.1| unknown [Lotus japonicus]                              148   4e-33
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   148   6e-33
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-32
ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing fac...   146   2e-32
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   146   2e-32

>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  148 bits (374), Expect = 4e-33
 Identities = 75/105 (71%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
 Frame = -1

Query: 1648 MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXDG 1469
            MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF             DG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 1468 KNGWRVELSHNSK--SXXXXXXXXXXGEDLKCYECGEPGHFAREC 1340
            KNGWRVELSHNSK             GEDLKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max]
          Length = 176

 Score =  148 bits (373), Expect = 6e-33
 Identities = 74/103 (71%), Positives = 77/103 (74%)
 Frame = -1

Query: 1648 MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXDG 1469
            MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF             DG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 1468 KNGWRVELSHNSKSXXXXXXXXXXGEDLKCYECGEPGHFAREC 1340
            KNGWRVELSHNSK           GED KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKG-GGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score =  147 bits (370), Expect = 1e-32
 Identities = 75/106 (70%), Positives = 77/106 (72%), Gaps = 3/106 (2%)
 Frame = -1

Query: 1648 MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXDG 1469
            MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF             DG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 1468 KNGWRVELSHNSK---SXXXXXXXXXXGEDLKCYECGEPGHFAREC 1340
            KNGWRVELSHNSK              GED KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
            gi|296086540|emb|CBI32129.3| unnamed protein product
            [Vitis vinifera]
          Length = 182

 Score =  146 bits (369), Expect = 2e-32
 Identities = 75/110 (68%), Positives = 78/110 (70%), Gaps = 7/110 (6%)
 Frame = -1

Query: 1648 MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXDG 1469
            MSRVYVGNLDPRVSERELEDEFR YGV+RSVWVAR+PPGYAFVEF             DG
Sbjct: 1    MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDG 60

Query: 1468 KNGWRVELSHNSK-------SXXXXXXXXXXGEDLKCYECGEPGHFAREC 1340
            K+GWRVELSHNSK                  GEDLKCYECGEPGHFAREC
Sbjct: 61   KSGWRVELSHNSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFAREC 110


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 184

 Score =  146 bits (368), Expect = 2e-32
 Identities = 74/109 (67%), Positives = 78/109 (71%), Gaps = 6/109 (5%)
 Frame = -1

Query: 1648 MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXDG 1469
            M+RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF             DG
Sbjct: 1    MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 1468 KNGWRVELSHNSK------SXXXXXXXXXXGEDLKCYECGEPGHFAREC 1340
            KNGWRVELSHNSK                 GED+KCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109