BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003895
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]               65   2e-18
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-18
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...    65   6e-18
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    65   2e-17
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha...    63   9e-16

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score = 65.5 bits (158), Expect(2) = 2e-18
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = -2

Query: 538  RTSKLEREVQHLAAICRHCGGGDWIVDSGIK 446
            RT+KLER++QHLAAICRHCGGGDWIV+SG+K
Sbjct: 1662 RTAKLERDIQHLAAICRHCGGGDWIVESGVK 1692



 Score = 52.0 bits (123), Expect(2) = 2e-18
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -3

Query: 324  FYERRKVQKELHTLSGVAADIGFYPRCMVELF 229
            FYERRKVQK+L  LS VA + GFYP+CMVE F
Sbjct: 1701 FYERRKVQKDLQGLSSVATEAGFYPKCMVEWF 1732


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 64.3 bits (155), Expect(2) = 3e-18
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = -2

Query: 538 RTSKLEREVQHLAAICRHCGGGDWIVDSGIK 446
           RTSKLE+E+QHLAAICRHCGGGDW+++SGIK
Sbjct: 690 RTSKLEKEMQHLAAICRHCGGGDWLLESGIK 720



 Score = 52.8 bits (125), Expect(2) = 3e-18
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -3

Query: 324 FYERRKVQKELHTLSGVAADIGFYPRCMVELF 229
           FYERRKVQ+EL  LS VA D+G YP+CMVE F
Sbjct: 729 FYERRKVQRELQGLSAVAGDVGLYPKCMVEWF 760


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score = 65.5 bits (158), Expect(2) = 6e-18
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = -2

Query: 538  RTSKLEREVQHLAAICRHCGGGDWIVDSGIK 446
            RT+KLER++QHLAAICRHCGGGDWIV+SG+K
Sbjct: 1105 RTAKLERDIQHLAAICRHCGGGDWIVESGVK 1135



 Score = 50.4 bits (119), Expect(2) = 6e-18
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -3

Query: 324  FYERRKVQKELHTLSGVAADIGFYPRCMVE 235
            FYERRKVQK+L  LS VA + GFYP+CMVE
Sbjct: 1144 FYERRKVQKDLQGLSSVATEAGFYPKCMVE 1173


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score = 65.1 bits (157), Expect(2) = 2e-17
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = -2

Query: 538  RTSKLEREVQHLAAICRHCGGGDWIVDSGIK 446
            RTSKLERE+QHLAAICRHCGGGDW+++SG+K
Sbjct: 1127 RTSKLEREMQHLAAICRHCGGGDWLLESGVK 1157



 Score = 48.9 bits (115), Expect(2) = 2e-17
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 324  FYERRKVQKELHTLSGVAADIGFYPRCMV 238
            FYERRKVQKEL  LS +AAD GFYP+CM+
Sbjct: 1166 FYERRKVQKELQGLSLIAADKGFYPKCML 1194


>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
            gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
            [Arabidopsis thaliana]
          Length = 1916

 Score = 63.2 bits (152), Expect(2) = 9e-16
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -2

Query: 538  RTSKLEREVQHLAAICRHCGGGDWIVDSGIK 446
            +TSKLERE+QHLA ICRHCGGGDW+V SG+K
Sbjct: 1846 KTSKLEREMQHLATICRHCGGGDWVVQSGVK 1876



 Score = 45.4 bits (106), Expect(2) = 9e-16
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = -3

Query: 324  FYERRKVQKELHTLSGVAADIGFYPRCMVELF 229
            FYERRKVQKEL  LS +A +   YP+CM E F
Sbjct: 1885 FYERRKVQKELRGLSSIATESELYPKCMAEWF 1916