BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003894
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   384   e-104
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   374   e-101
ref|XP_003626276.1| DNA polymerase [Medicago truncatula] gi|3555...   354   1e-95

>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  389 bits (999), Expect = e-106
 Identities = 188/246 (76%), Positives = 210/246 (85%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1    FEHQDISKVKAYLQRQWTRILAGRVSLHDFVFAKEVRLGTYSNR-SASLPPAAIVAIKAM 177
            FEH+DIS+VK YLQRQWTRIL+GRVSL DFVFAKEVRLGTYS R SA+LPPAAIVA KAM
Sbjct: 490  FEHEDISEVKTYLQRQWTRILSGRVSLQDFVFAKEVRLGTYSTRASAALPPAAIVATKAM 549

Query: 178  KTDPRAEPRYAERVPYAVIHGEPGARXXXXXXXXXXXXATDSPFSLNDLYYINKQIIPAL 357
            +TDPRAEP YAERVPY VIHGEPGAR            A DSPF LND+YYI KQIIPAL
Sbjct: 550  RTDPRAEPCYAERVPYVVIHGEPGARLVDMVVDPLDLLAIDSPFRLNDVYYITKQIIPAL 609

Query: 358  QRVFGLVGADLKRWFSEMPRPVRSAVGKRFSYAPSGQRTRIDYYYLSRHCILCGELVQAS 537
            QRVFGL+GADL +WFSEMPRP R A+ KR SYAP+ QRTRIDYYYLS+HC+LCGELVQAS
Sbjct: 610  QRVFGLLGADLNQWFSEMPRPAREALSKRPSYAPNPQRTRIDYYYLSKHCVLCGELVQAS 669

Query: 538  NHFCDNCSKNEAAVATAMVCRTSKLEREVQHLAAICRHCGGGDWIVDSGIKCVSLACTVF 717
             H C+ CS+ E A ATA++ RTSKLE+E+QHLAAICRHCGGGDW+++SGIKC SLAC+VF
Sbjct: 670  AHICNKCSQREIAAATAVIGRTSKLEKEMQHLAAICRHCGGGDWLLESGIKCTSLACSVF 729

Query: 718  YERRKV 735
            YERRKV
Sbjct: 730  YERRKV 735


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  384 bits (985), Expect = e-104
 Identities = 185/245 (75%), Positives = 205/245 (83%)
 Frame = +1

Query: 1    FEHQDISKVKAYLQRQWTRILAGRVSLHDFVFAKEVRLGTYSNRSASLPPAAIVAIKAMK 180
            FEHQDISKVK YLQRQW RIL+GRVSL DFVFAKEVRLGTYS+R++SLPPAAIVAIKAM+
Sbjct: 906  FEHQDISKVKVYLQRQWRRILSGRVSLQDFVFAKEVRLGTYSSRASSLPPAAIVAIKAMR 965

Query: 181  TDPRAEPRYAERVPYAVIHGEPGARXXXXXXXXXXXXATDSPFSLNDLYYINKQIIPALQ 360
             DPRAEP YAERVPY VIHGEPGAR            A DSP+ LND YYINKQIIPALQ
Sbjct: 966  ADPRAEPCYAERVPYVVIHGEPGARLVDLVVDPLDLLAIDSPYRLNDQYYINKQIIPALQ 1025

Query: 361  RVFGLVGADLKRWFSEMPRPVRSAVGKRFSYAPSGQRTRIDYYYLSRHCILCGELVQASN 540
            RVFGLVGADL +WFSEMPRPVR    K  S+AP+  RTRID+YYLS+HCILCGEL  AS 
Sbjct: 1026 RVFGLVGADLYQWFSEMPRPVREVYAKHKSHAPNPYRTRIDFYYLSKHCILCGELSPASA 1085

Query: 541  HFCDNCSKNEAAVATAMVCRTSKLEREVQHLAAICRHCGGGDWIVDSGIKCVSLACTVFY 720
            H CD CSK+  AVA A++ RT+KLER++QHLAAICRHCGGGDWIV+SG+KC SLAC+VFY
Sbjct: 1086 HICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAICRHCGGGDWIVESGVKCTSLACSVFY 1145

Query: 721  ERRKV 735
            ERRKV
Sbjct: 1146 ERRKV 1150


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  384 bits (985), Expect = e-104
 Identities = 185/245 (75%), Positives = 205/245 (83%)
 Frame = +1

Query: 1    FEHQDISKVKAYLQRQWTRILAGRVSLHDFVFAKEVRLGTYSNRSASLPPAAIVAIKAMK 180
            FEHQDISKVK YLQRQW RIL+GRVSL DFVFAKEVRLGTYS+R++SLPPAAIVAIKAM+
Sbjct: 1463 FEHQDISKVKVYLQRQWRRILSGRVSLQDFVFAKEVRLGTYSSRASSLPPAAIVAIKAMR 1522

Query: 181  TDPRAEPRYAERVPYAVIHGEPGARXXXXXXXXXXXXATDSPFSLNDLYYINKQIIPALQ 360
             DPRAEP YAERVPY VIHGEPGAR            A DSP+ LND YYINKQIIPALQ
Sbjct: 1523 ADPRAEPCYAERVPYVVIHGEPGARLVDLVVDPLDLLAIDSPYRLNDQYYINKQIIPALQ 1582

Query: 361  RVFGLVGADLKRWFSEMPRPVRSAVGKRFSYAPSGQRTRIDYYYLSRHCILCGELVQASN 540
            RVFGLVGADL +WFSEMPRPVR    K  S+AP+  RTRID+YYLS+HCILCGEL  AS 
Sbjct: 1583 RVFGLVGADLYQWFSEMPRPVREVYAKHKSHAPNPYRTRIDFYYLSKHCILCGELSPASA 1642

Query: 541  HFCDNCSKNEAAVATAMVCRTSKLEREVQHLAAICRHCGGGDWIVDSGIKCVSLACTVFY 720
            H CD CSK+  AVA A++ RT+KLER++QHLAAICRHCGGGDWIV+SG+KC SLAC+VFY
Sbjct: 1643 HICDKCSKDGTAVAAAVIGRTAKLERDIQHLAAICRHCGGGDWIVESGVKCTSLACSVFY 1702

Query: 721  ERRKV 735
            ERRKV
Sbjct: 1703 ERRKV 1707


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  374 bits (960), Expect = e-101
 Identities = 179/246 (72%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1    FEHQDISKVKAYLQRQWTRILAGRVSLHDFVFAKEVRLGTYSNRSAS-LPPAAIVAIKAM 177
            FEHQDIS++K YLQRQWTRIL+GRVSL DF+FAKEVRLGTYS R+AS LPPAAI+A KAM
Sbjct: 927  FEHQDISEIKGYLQRQWTRILSGRVSLQDFIFAKEVRLGTYSTRAASSLPPAAILATKAM 986

Query: 178  KTDPRAEPRYAERVPYAVIHGEPGARXXXXXXXXXXXXATDSPFSLNDLYYINKQIIPAL 357
            K DPRAEPRYAERVPY VIHGEPGAR            A DSP+ LND+YYI+KQIIPAL
Sbjct: 987  KVDPRAEPRYAERVPYVVIHGEPGARLVDMVVDPLDLLAIDSPYRLNDIYYISKQIIPAL 1046

Query: 358  QRVFGLVGADLKRWFSEMPRPVRSAVGKRFSYAPSGQRTRIDYYYLSRHCILCGELVQAS 537
            QRVFGL+GADL +WF EMPRP R    KR SY  + QRTRIDYYYLS+HC+LC ELV AS
Sbjct: 1047 QRVFGLLGADLNQWFLEMPRPGRDTYAKRPSYGSNPQRTRIDYYYLSKHCVLCDELVNAS 1106

Query: 538  NHFCDNCSKNEAAVATAMVCRTSKLEREVQHLAAICRHCGGGDWIVDSGIKCVSLACTVF 717
               C+ CS+ E A ATA++ RTSKLERE+QHLAAICRHCGGGDW+++SG+KC SLAC+VF
Sbjct: 1107 TRLCNKCSQKETAAATAVIGRTSKLEREMQHLAAICRHCGGGDWLLESGVKCTSLACSVF 1166

Query: 718  YERRKV 735
            YERRKV
Sbjct: 1167 YERRKV 1172


>ref|XP_003626276.1| DNA polymerase [Medicago truncatula] gi|355501291|gb|AES82494.1| DNA
            polymerase [Medicago truncatula]
          Length = 1037

 Score =  354 bits (908), Expect = 1e-95
 Identities = 169/245 (68%), Positives = 199/245 (81%)
 Frame = +1

Query: 1    FEHQDISKVKAYLQRQWTRILAGRVSLHDFVFAKEVRLGTYSNRSASLPPAAIVAIKAMK 180
            FEHQ + +VK YLQRQW RIL+GRVSL DF+FAKEVRLGTYS R +SLPPAAIVA KAM+
Sbjct: 769  FEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMR 828

Query: 181  TDPRAEPRYAERVPYAVIHGEPGARXXXXXXXXXXXXATDSPFSLNDLYYINKQIIPALQ 360
             D RAEPRYAER+PY VIHGEPGAR            A DSPF +NDLYYINKQIIPALQ
Sbjct: 829  VDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQ 888

Query: 361  RVFGLVGADLKRWFSEMPRPVRSAVGKRFSYAPSGQRTRIDYYYLSRHCILCGELVQASN 540
            RVFGLVGADL +WF+EMPRPVR A  K  ++ P+ QRTRIDYYYLS+HC+LCG LVQAS 
Sbjct: 889  RVFGLVGADLNQWFAEMPRPVREASVKH-AFTPNFQRTRIDYYYLSKHCVLCGGLVQASA 947

Query: 541  HFCDNCSKNEAAVATAMVCRTSKLEREVQHLAAICRHCGGGDWIVDSGIKCVSLACTVFY 720
              C  CS+NE A ATA++ +T+KLE+E+QHL +IC+HCGGGD +++SG+KC S++C VFY
Sbjct: 948  RLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFY 1007

Query: 721  ERRKV 735
            ERRKV
Sbjct: 1008 ERRKV 1012