BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003888
         (1870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536287.1| PREDICTED: malate dehydrogenase [NADP], chlo...   686   0.0  
ref|NP_001234056.1| malate dehydrogenase [Solanum lycopersicum] ...   686   0.0  
ref|NP_001062517.1| Os08g0562100 [Oryza sativa Japonica Group] g...   682   0.0  
gb|EEC84038.1| hypothetical protein OsI_30287 [Oryza sativa Indi...   682   0.0  
ref|XP_002265080.1| PREDICTED: malate dehydrogenase [NADP], chlo...   680   0.0  

>ref|XP_003536287.1| PREDICTED: malate dehydrogenase [NADP], chloroplastic-like [Glycine
            max]
          Length = 436

 Score =  686 bits (1771), Expect = 0.0
 Identities = 343/435 (78%), Positives = 368/435 (84%), Gaps = 2/435 (0%)
 Frame = -1

Query: 1750 MAVTDFTPTYKQPHFLPSQXXXXXXXXXXXXXXXXRPFPRRNNARVCCXXXXXXXXXXXX 1571
            MAVT F PT  + H   SQ                 P  R   AR+CC            
Sbjct: 1    MAVTQFNPTCSKTHLHSSQLPFLSRTLPRHRHCTIAPLHRTQQARICCSVAPNEVQVPAV 60

Query: 1570 XXVGKKG--ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFG 1397
                 K   ECYGVFCLTYDL+A EET+SWK LINIAVSGAAGMI+NHLLFKLASGEVFG
Sbjct: 61   KTSDPKSKPECYGVFCLTYDLRAEEETRSWKKLINIAVSGAAGMIANHLLFKLASGEVFG 120

Query: 1396 PDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKP 1217
            PDQPIALKLLGSERS QALEGVAMELEDSL+PLLREVSIGIDPY++FQDAEWALLIGAKP
Sbjct: 121  PDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVSIGIDPYEVFQDAEWALLIGAKP 180

Query: 1216 RGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKN 1037
            RGPGMERA LLDINGQI+A QG+ALNAVASRNVKVIVVGNPCNTNALIC+KNAPNIPAKN
Sbjct: 181  RGPGMERADLLDINGQIYAAQGRALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKN 240

Query: 1036 FHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKD 857
            FHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNARI GLPVK+V+KD
Sbjct: 241  FHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNARIDGLPVKEVVKD 300

Query: 856  SKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNG 677
             KWLE++FTE VQKRGG LI+KWGRSS AST+VSIVDAIRSLVTPT EGDWFS+GVY++G
Sbjct: 301  QKWLEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLVTPTPEGDWFSSGVYSDG 360

Query: 676  NPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEG 497
            NPYGIAE IVFSMPCRSKGDGDYELVKDV+ DD+L +RI K+EAELLAEKRCVAHLTGEG
Sbjct: 361  NPYGIAEGIVFSMPCRSKGDGDYELVKDVIFDDYLQQRIAKTEAELLAEKRCVAHLTGEG 420

Query: 496  NAYCDLPGDTMLPGE 452
             A CDLPGDTMLPGE
Sbjct: 421  IAVCDLPGDTMLPGE 435


>ref|NP_001234056.1| malate dehydrogenase [Solanum lycopersicum]
            gi|56562183|emb|CAH60894.1| malate dehydrogenase [Solanum
            lycopersicum]
          Length = 442

 Score =  686 bits (1770), Expect = 0.0
 Identities = 347/441 (78%), Positives = 375/441 (85%), Gaps = 8/441 (1%)
 Frame = -1

Query: 1750 MAVTDFTPTY----KQPHFLPSQXXXXXXXXXXXXXXXXRPFPR-RNNARVCCXXXXXXX 1586
            MAV +F P+     K+  F  SQ                +P  R  N++++CC       
Sbjct: 1    MAVAEFIPSSSSLTKKASFYSSQLSNVSTKISHQRRLSFKPLLRTHNHSQICCSVTSKEA 60

Query: 1585 XXXXXXXVG---KKGECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLA 1415
                        KK ECYGVFCLTYDLKA EET SWK +I ++VSGAAGMI+NHLLFKLA
Sbjct: 61   QATTVVQTDDPKKKSECYGVFCLTYDLKAEEETSSWKKMITVSVSGAAGMIANHLLFKLA 120

Query: 1414 SGEVFGPDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWAL 1235
            SGEVFGPDQPIAL+LLGSERS QALEGVAMELEDSLYPLLREV+IGIDPY++FQDAEWAL
Sbjct: 121  SGEVFGPDQPIALRLLGSERSIQALEGVAMELEDSLYPLLREVNIGIDPYEVFQDAEWAL 180

Query: 1234 LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAP 1055
            LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALIC+KNAP
Sbjct: 181  LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAP 240

Query: 1054 NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPV 875
            NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNA+I GLPV
Sbjct: 241  NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPV 300

Query: 874  KDVIKDSKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFST 695
            K+VIKD+KWLE++FTE VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLVTPT EGDWFST
Sbjct: 301  KEVIKDTKWLEEEFTEKVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFST 360

Query: 694  GVYTNGNPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVA 515
            GVYTNGNPYGIA+DIVFSMPCRSKGDGDYELVK+V+ DD+L  RIKKSE ELLAEKRCVA
Sbjct: 361  GVYTNGNPYGIAQDIVFSMPCRSKGDGDYELVKEVIFDDYLWNRIKKSEDELLAEKRCVA 420

Query: 514  HLTGEGNAYCDLPGDTMLPGE 452
            HLTGEG A CDLPGDTMLPGE
Sbjct: 421  HLTGEGIAVCDLPGDTMLPGE 441


>ref|NP_001062517.1| Os08g0562100 [Oryza sativa Japonica Group]
            gi|42408428|dbj|BAD09610.1| putative malate dehydrogenase
            [NADP], chloroplast precursor (NADP-MDH) [Oryza sativa
            Japonica Group] gi|45736179|dbj|BAD13225.1| putative
            malate dehydrogenase [NADP], chloroplast precursor
            (NADP-MDH) [Oryza sativa Japonica Group]
            gi|113624486|dbj|BAF24431.1| Os08g0562100 [Oryza sativa
            Japonica Group] gi|215740957|dbj|BAG97452.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222641023|gb|EEE69155.1| hypothetical protein
            OsJ_28293 [Oryza sativa Japonica Group]
          Length = 433

 Score =  682 bits (1760), Expect = 0.0
 Identities = 334/366 (91%), Positives = 351/366 (95%)
 Frame = -1

Query: 1549 ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 1370
            ECYGVFC TYDL+A E+TKSWKSL+N+AVSGAAGMISNHLLFKLASGEVFGPDQPIALKL
Sbjct: 67   ECYGVFCTTYDLRADEKTKSWKSLVNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 126

Query: 1369 LGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKPRGPGMERAG 1190
            LGSERS QALEGVAMELEDSLYPLLREVSIGIDPY +F+DAEWALLIGAKPRGPGMER+ 
Sbjct: 127  LGSERSIQALEGVAMELEDSLYPLLREVSIGIDPYVVFEDAEWALLIGAKPRGPGMERSA 186

Query: 1189 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKNFHALTRLDE 1010
            LLDINGQIFAEQGKALN+VASRNVKVIVVGNPCNTNALIC+KNAPNIPAKNFHALTRLDE
Sbjct: 187  LLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDE 246

Query: 1009 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKDSKWLEKDFT 830
            NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+I G PVK+VIKD+KWLE +FT
Sbjct: 247  NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGRPVKEVIKDTKWLEDEFT 306

Query: 829  EDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNGNPYGIAEDI 650
            + VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLV PT EGDWFSTGVYT GNPYGIAEDI
Sbjct: 307  KTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDI 366

Query: 649  VFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEGNAYCDLPGD 470
            VFSMPCRSKGDGDYELVKDV +DDFL ERIKKSEAELLAEKRCVAHLTGEGNA+CDLPGD
Sbjct: 367  VFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGD 426

Query: 469  TMLPGE 452
            TMLPGE
Sbjct: 427  TMLPGE 432


>gb|EEC84038.1| hypothetical protein OsI_30287 [Oryza sativa Indica Group]
          Length = 433

 Score =  682 bits (1760), Expect = 0.0
 Identities = 334/366 (91%), Positives = 351/366 (95%)
 Frame = -1

Query: 1549 ECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 1370
            ECYGVFC TYDL+A E+TKSWKSL+N+AVSGAAGMISNHLLFKLASGEVFGPDQPIALKL
Sbjct: 67   ECYGVFCTTYDLRADEKTKSWKSLVNVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL 126

Query: 1369 LGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAKPRGPGMERAG 1190
            LGSERS QALEGVAMELEDSLYPLLREVSIGIDPY +F+DAEWALLIGAKPRGPGMER+ 
Sbjct: 127  LGSERSIQALEGVAMELEDSLYPLLREVSIGIDPYVVFEDAEWALLIGAKPRGPGMERSA 186

Query: 1189 LLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAKNFHALTRLDE 1010
            LLDINGQIFAEQGKALN+VASRNVKVIVVGNPCNTNALIC+KNAPNIPAKNFHALTRLDE
Sbjct: 187  LLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDE 246

Query: 1009 NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIKDSKWLEKDFT 830
            NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+I G PVK+VIKD+KWLE +FT
Sbjct: 247  NRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGRPVKEVIKDTKWLEDEFT 306

Query: 829  EDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTNGNPYGIAEDI 650
            + VQKRGGVLI+KWGRSS ASTAVSIVDAIRSLV PT EGDWFSTGVYT GNPYGIAEDI
Sbjct: 307  KTVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVNPTPEGDWFSTGVYTTGNPYGIAEDI 366

Query: 649  VFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGEGNAYCDLPGD 470
            VFSMPCRSKGDGDYELVKDV +DDFL ERIKKSEAELLAEKRCVAHLTGEGNA+CDLPGD
Sbjct: 367  VFSMPCRSKGDGDYELVKDVAMDDFLWERIKKSEAELLAEKRCVAHLTGEGNAFCDLPGD 426

Query: 469  TMLPGE 452
            TMLPGE
Sbjct: 427  TMLPGE 432


>ref|XP_002265080.1| PREDICTED: malate dehydrogenase [NADP], chloroplastic [Vitis
            vinifera] gi|296085946|emb|CBI31387.3| unnamed protein
            product [Vitis vinifera]
          Length = 437

 Score =  680 bits (1755), Expect = 0.0
 Identities = 345/436 (79%), Positives = 370/436 (84%), Gaps = 3/436 (0%)
 Frame = -1

Query: 1750 MAVTDFTPTYK--QPHFLPSQXXXXXXXXXXXXXXXXRPFPRRNNARVCCXXXXXXXXXX 1577
            MA+   +P+Y   Q H   SQ                RP PR  NAR+ C          
Sbjct: 1    MALAYLSPSYANTQLHLHSSQLSFLSTHLSFHRRHSLRPLPRTRNARISCSVASNEAPVA 60

Query: 1576 XXXXVGK-KGECYGVFCLTYDLKAAEETKSWKSLINIAVSGAAGMISNHLLFKLASGEVF 1400
                  K K EC+GVFC TYDLKA EETKSWK LINIAVSGAAGMISNHLLFKLA+GEVF
Sbjct: 61   VQAQDQKIKPECFGVFCTTYDLKAEEETKSWKKLINIAVSGAAGMISNHLLFKLAAGEVF 120

Query: 1399 GPDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYDLFQDAEWALLIGAK 1220
            GPDQPIA KLLGSERSFQALEGVAMELEDSL+PLLREVSIGIDPY++FQD EWALLIGAK
Sbjct: 121  GPDQPIAFKLLGSERSFQALEGVAMELEDSLFPLLREVSIGIDPYEVFQDVEWALLIGAK 180

Query: 1219 PRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICMKNAPNIPAK 1040
            PRGPGMERA LLDINGQIFAEQGKALNAVASRNVKV+VVGNPCNTNALICMKNAPNIPAK
Sbjct: 181  PRGPGMERADLLDINGQIFAEQGKALNAVASRNVKVMVVGNPCNTNALICMKNAPNIPAK 240

Query: 1039 NFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIMGLPVKDVIK 860
            NFHALTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDFLNARI GLPVK+VIK
Sbjct: 241  NFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNARINGLPVKEVIK 300

Query: 859  DSKWLEKDFTEDVQKRGGVLIKKWGRSSGASTAVSIVDAIRSLVTPTREGDWFSTGVYTN 680
            D KWLE++FTE VQKRGGVLI+KWGRSS ASTAVSIVDA++SLVTPT EGDWFS+GVYT 
Sbjct: 301  DIKWLEEEFTEKVQKRGGVLIQKWGRSSAASTAVSIVDAMKSLVTPTPEGDWFSSGVYTT 360

Query: 679  GNPYGIAEDIVFSMPCRSKGDGDYELVKDVLIDDFLHERIKKSEAELLAEKRCVAHLTGE 500
            GNPYG+AE IVFSMPCRSKGDGDYELVKDV+ D++L +RI K+EAELLAEKRCVAHLTGE
Sbjct: 361  GNPYGVAEGIVFSMPCRSKGDGDYELVKDVIFDEYLLKRITKTEAELLAEKRCVAHLTGE 420

Query: 499  GNAYCDLPGDTMLPGE 452
            G A+CDLP DTMLPGE
Sbjct: 421  GIAFCDLPEDTMLPGE 436