BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003864
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycin...   187   2e-45
gb|AFK34998.1| unknown [Lotus japonicus]                              185   9e-45
ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform...   185   9e-45
dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|...   185   9e-45
ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [C...   184   1e-44

>ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycine max]
           gi|255629303|gb|ACU14996.1| unknown [Glycine max]
          Length = 107

 Score =  187 bits (475), Expect = 2e-45
 Identities = 90/106 (84%), Positives = 97/106 (91%)
 Frame = +1

Query: 70  MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249
           MNAFKA+KACVPIAWSP+IYITLVRG+PGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQPIPTPDS 387
           MLQQVKRLVVIETEEM+KARKQK   HR LRPPLVI H+P    D+
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDA 106


>gb|AFK34998.1| unknown [Lotus japonicus]
          Length = 116

 Score =  185 bits (469), Expect = 9e-45
 Identities = 88/100 (88%), Positives = 95/100 (95%)
 Frame = +1

Query: 70  MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249
           MNAFKA+KACVPIAWSP++YITLVRG+PGTR+LHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 10  MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 69

Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQP 369
           MLQQVKRLVVIETEEM+KARKQK   HR LRPPLVI+HQP
Sbjct: 70  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQP 109


>ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera]
           gi|359474731|ref|XP_003631524.1| PREDICTED: 50S
           ribosomal protein L30 isoform 2 [Vitis vinifera]
           gi|359474733|ref|XP_003631525.1| PREDICTED: 50S
           ribosomal protein L30 isoform 3 [Vitis vinifera]
           gi|296085477|emb|CBI29209.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  185 bits (469), Expect = 9e-45
 Identities = 91/108 (84%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = +1

Query: 70  MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249
           MNAFKAFKACVP+AWSP++YITLVRG+PGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDH-QPIPTPDSS 390
           MLQQVKRLVVIETEEM+KARK K   HR LRPPLVI+H  P P  DSS
Sbjct: 61  MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDSS 108


>dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|AFK47535.1| unknown
           [Lotus japonicus]
          Length = 107

 Score =  185 bits (469), Expect = 9e-45
 Identities = 88/100 (88%), Positives = 95/100 (95%)
 Frame = +1

Query: 70  MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249
           MNAFKA+KACVPIAWSP++YITLVRG+PGTR+LHRRTLEALRL KCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60

Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQP 369
           MLQQVKRLVVIETEEM+KARKQK   HR LRPPLVI+HQP
Sbjct: 61  MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQP 100


>ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus]
           gi|449522520|ref|XP_004168274.1| PREDICTED: 50S
           ribosomal protein L30-like [Cucumis sativus]
          Length = 108

 Score =  184 bits (468), Expect = 1e-44
 Identities = 88/107 (82%), Positives = 98/107 (91%)
 Frame = +1

Query: 70  MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249
           MNAFKAFKA VPIAWS ++YITLVRGMPGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG
Sbjct: 1   MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60

Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQPIPTPDSS 390
           M+QQVKRLVV+ETEEM+KARKQK+  HR LRPPLVI+H P P+  S+
Sbjct: 61  MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASA 107