BLASTX nr result
ID: Coptis25_contig00003864
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003864 (717 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycin... 187 2e-45 gb|AFK34998.1| unknown [Lotus japonicus] 185 9e-45 ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform... 185 9e-45 dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|... 185 9e-45 ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [C... 184 1e-44 >ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycine max] gi|255629303|gb|ACU14996.1| unknown [Glycine max] Length = 107 Score = 187 bits (475), Expect = 2e-45 Identities = 90/106 (84%), Positives = 97/106 (91%) Frame = +1 Query: 70 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249 MNAFKA+KACVPIAWSP+IYITLVRG+PGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG Sbjct: 1 MNAFKAYKACVPIAWSPNIYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60 Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQPIPTPDS 387 MLQQVKRLVVIETEEM+KARKQK HR LRPPLVI H+P D+ Sbjct: 61 MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDA 106 >gb|AFK34998.1| unknown [Lotus japonicus] Length = 116 Score = 185 bits (469), Expect = 9e-45 Identities = 88/100 (88%), Positives = 95/100 (95%) Frame = +1 Query: 70 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249 MNAFKA+KACVPIAWSP++YITLVRG+PGTR+LHRRTLEALRL KCNRTVMRWNTPTVRG Sbjct: 10 MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 69 Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQP 369 MLQQVKRLVVIETEEM+KARKQK HR LRPPLVI+HQP Sbjct: 70 MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQP 109 >ref|XP_002272724.1| PREDICTED: 50S ribosomal protein L30 isoform 1 [Vitis vinifera] gi|359474731|ref|XP_003631524.1| PREDICTED: 50S ribosomal protein L30 isoform 2 [Vitis vinifera] gi|359474733|ref|XP_003631525.1| PREDICTED: 50S ribosomal protein L30 isoform 3 [Vitis vinifera] gi|296085477|emb|CBI29209.3| unnamed protein product [Vitis vinifera] Length = 108 Score = 185 bits (469), Expect = 9e-45 Identities = 91/108 (84%), Positives = 98/108 (90%), Gaps = 1/108 (0%) Frame = +1 Query: 70 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249 MNAFKAFKACVP+AWSP++YITLVRG+PGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG Sbjct: 1 MNAFKAFKACVPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60 Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDH-QPIPTPDSS 390 MLQQVKRLVVIETEEM+KARK K HR LRPPLVI+H P P DSS Sbjct: 61 MLQQVKRLVVIETEEMYKARKLKETNHRALRPPLVINHVLPPPANDSS 108 >dbj|BAF98596.1| CM0545.370.nc [Lotus japonicus] gi|388518947|gb|AFK47535.1| unknown [Lotus japonicus] Length = 107 Score = 185 bits (469), Expect = 9e-45 Identities = 88/100 (88%), Positives = 95/100 (95%) Frame = +1 Query: 70 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249 MNAFKA+KACVPIAWSP++YITLVRG+PGTR+LHRRTLEALRL KCNRTVMRWNTPTVRG Sbjct: 1 MNAFKAYKACVPIAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRG 60 Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQP 369 MLQQVKRLVVIETEEM+KARKQK HR LRPPLVI+HQP Sbjct: 61 MLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVINHQP 100 >ref|XP_004151902.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus] gi|449522520|ref|XP_004168274.1| PREDICTED: 50S ribosomal protein L30-like [Cucumis sativus] Length = 108 Score = 184 bits (468), Expect = 1e-44 Identities = 88/107 (82%), Positives = 98/107 (91%) Frame = +1 Query: 70 MNAFKAFKACVPIAWSPHIYITLVRGMPGTRKLHRRTLEALRLRKCNRTVMRWNTPTVRG 249 MNAFKAFKA VPIAWS ++YITLVRGMPGTR+LHRRTLEALRLRKCNRTVMRWNTPTVRG Sbjct: 1 MNAFKAFKASVPIAWSTNLYITLVRGMPGTRRLHRRTLEALRLRKCNRTVMRWNTPTVRG 60 Query: 250 MLQQVKRLVVIETEEMFKARKQKLATHRDLRPPLVIDHQPIPTPDSS 390 M+QQVKRLVV+ETEEM+KARKQK+ HR LRPPLVI+H P P+ S+ Sbjct: 61 MIQQVKRLVVVETEEMYKARKQKMEQHRALRPPLVINHLPAPSSASA 107