BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003862
         (1658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synt...   454   e-125
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   448   e-123
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   446   e-123
gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus ...   444   e-122
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   442   e-122

>ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like
            [Cucumis sativus] gi|449514740|ref|XP_004164466.1|
            PREDICTED: geranylgeranyl pyrophosphate synthase,
            chloroplastic-like [Cucumis sativus]
          Length = 363

 Score =  454 bits (1169), Expect = e-125
 Identities = 244/364 (67%), Positives = 280/364 (76%)
 Frame = -1

Query: 1346 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1167
            Q+C  F+ AS+S       G  LKR   S +  +RR    SISS + I AVLTKEETL  
Sbjct: 11   QSCSIFSQASRST------GYPLKRGLKSFIIPKRRLPTSSISS-LSICAVLTKEETLTE 63

Query: 1166 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 987
            EE +      FNF  YM  K  SVN ALD A+ L+EPL+IHE+MRYSL+AGGKRVRP+LC
Sbjct: 64   EEGKP----TFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 119

Query: 986  IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 807
            IAACELVGG+E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 120  IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 179

Query: 806  XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 627
                    AFEHIA +T+GVSP +IVR + ELAKSIG+EGLVAGQVVDI S GA D  L+
Sbjct: 180  AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 239

Query: 626  QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 447
            QLEYIH+HKTA LLE++VV+GAI+GGGSNE+VEKLR FAR IGLLFQVVDDILDVTKSS 
Sbjct: 240  QLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 299

Query: 446  ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 267
            ELGKTAGKDL++DK TYPKL+G+EKS+ FA KLN++A+EQLS FDP KAAPL+ALANYIA
Sbjct: 300  ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 359

Query: 266  YRQN 255
            YRQN
Sbjct: 360  YRQN 363


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  448 bits (1153), Expect = e-123
 Identities = 232/364 (63%), Positives = 280/364 (76%)
 Frame = -1

Query: 1346 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1167
            QTC  FN A +S  S F++      ++    +   + +R + SS+  ISAVLT++E +  
Sbjct: 10   QTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPT-SSFSSISAVLTEQEAVTE 68

Query: 1166 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 987
            +E QK     FNF SYM  KA SVNQALD A+LL+EP  IHE+MRYSLLAGGKRVRP+LC
Sbjct: 69   DEEQKST---FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLC 125

Query: 986  IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 807
            ++ACELVGGDE          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 126  LSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 185

Query: 806  XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 627
                    AFEH+A +TVGV   +I+R + ELAKSIGSEGLVAGQVVDI S G  +V L+
Sbjct: 186  AGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLE 245

Query: 626  QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 447
            QLE+IH+HKTA LLE+SVV+GAI+GGG++E+VE+LR FARCIGLLFQ VDDILDVTKSS+
Sbjct: 246  QLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQ 305

Query: 446  ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 267
            ELGKTAGKDL++DK TYP+L+G+EKS+ FA+KLN+EA+E L  FDP KAAPL+ALANYIA
Sbjct: 306  ELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIA 365

Query: 266  YRQN 255
            YRQN
Sbjct: 366  YRQN 369


>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  446 bits (1148), Expect = e-123
 Identities = 236/368 (64%), Positives = 279/368 (75%)
 Frame = -1

Query: 1358 SPCAQTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEE 1179
            S   QTC  FN A +S         +L   ++  + +    +R SISS V +SAVLTKE+
Sbjct: 7    STWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISS-VSVSAVLTKED 65

Query: 1178 TLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVR 999
            TL  EE  +     FNF +YM  KA SVNQALD A+ LK+P KIHE+MRYSLLAGGKRVR
Sbjct: 66   TLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVR 125

Query: 998  PILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGES 819
            P+LCIAACELVGG E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE 
Sbjct: 126  PMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 185

Query: 818  XXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATD 639
                        +FEHIA +T GV P +I+R + ELA+SIG+EGLVAGQVVDI S G +D
Sbjct: 186  VAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSD 245

Query: 638  VKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVT 459
            V L+ LE+IH+HKTA LLE +VV+GAI+GGGSNEEVEKLR FAR IGLLFQVVDDILDVT
Sbjct: 246  VGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVT 305

Query: 458  KSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALA 279
            KSS+ELGKTAGKDL++DK TYPKL+G+EKS+ FA+KLNK+A++QL+ FD  KAAPL+ALA
Sbjct: 306  KSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALA 365

Query: 278  NYIAYRQN 255
            NYIA+RQN
Sbjct: 366  NYIAHRQN 373


>gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
          Length = 365

 Score =  444 bits (1142), Expect = e-122
 Identities = 237/355 (66%), Positives = 278/355 (78%)
 Frame = -1

Query: 1319 SKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEAEEVQKKVHF 1140
            S+S  S F +   LK    S  +   +S+R   SS+  +SAVLTK+ET++ EE ++K   
Sbjct: 15   SRSRSSPFKLLHPLKSHGFSFQF--SKSQRPISSSFFTVSAVLTKQETVKEEEGEEKP-- 70

Query: 1139 AFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILCIAACELVGG 960
             FNF +YM  K  SVNQALD A+ LKEP KIHE+MRYSLLAGGKRVRP+LC+AACELVGG
Sbjct: 71   TFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGG 130

Query: 959  DEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXXXXXXXXXXA 780
             E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE             A
Sbjct: 131  HESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFA 190

Query: 779  FEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLDQLEYIHIHK 600
            FEHIA +TVGVS  +IVR + ELAKSIGSEGLVAGQVVDI S G +DV L+QLE+IH+HK
Sbjct: 191  FEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHK 250

Query: 599  TAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 420
            TA LLE+SVV+GAI+GGGS+ E+EKLR FAR IGLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 251  TAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKD 310

Query: 419  LMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIAYRQN 255
            L++DK TYPKL+G+EKS+ FADKLNK+A++ LS FDP KAAPL+ALANYIA+RQN
Sbjct: 311  LVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQN 365


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  442 bits (1138), Expect = e-122
 Identities = 224/315 (71%), Positives = 260/315 (82%)
 Frame = -1

Query: 1199 AVLTKEETLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLL 1020
            AVLTKEE +   +  ++   AFNF++Y+  KA SVN+ALD A+ ++EP+K+HESMRYSLL
Sbjct: 54   AVLTKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLL 113

Query: 1019 AGGKRVRPILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTN 840
            AGGKRVRP+LCIAACELVGGDE          EMIHTMSL+HDDLPCMDNDDLRRGKPTN
Sbjct: 114  AGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTN 173

Query: 839  HKVYGESXXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDI 660
            HKV+GE+            AFEH+A ATVGV P  IVR V ELAKSIGSEGLVAGQVVDI
Sbjct: 174  HKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDI 233

Query: 659  GSTGATDVKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVV 480
             S G  DV L+ LEYIH+HKTA LLE +VV+GAI+GGGSNEE+EKLRKFARCIGLLFQVV
Sbjct: 234  CSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVV 293

Query: 479  DDILDVTKSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKA 300
            DDILDVTKSS+ELGKTAGKDL++DK TYPKL+G+EKS+  A++LNK+AK+QLS FDP KA
Sbjct: 294  DDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKA 353

Query: 299  APLVALANYIAYRQN 255
            APL+AL+NYIAYRQN
Sbjct: 354  APLIALSNYIAYRQN 368