BLASTX nr result
ID: Coptis25_contig00003862
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003862 (1658 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synt... 454 e-125 gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul... 448 e-123 gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel... 446 e-123 gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus ... 444 e-122 ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt... 442 e-122 >ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucumis sativus] gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Cucumis sativus] Length = 363 Score = 454 bits (1169), Expect = e-125 Identities = 244/364 (67%), Positives = 280/364 (76%) Frame = -1 Query: 1346 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1167 Q+C F+ AS+S G LKR S + +RR SISS + I AVLTKEETL Sbjct: 11 QSCSIFSQASRST------GYPLKRGLKSFIIPKRRLPTSSISS-LSICAVLTKEETLTE 63 Query: 1166 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 987 EE + FNF YM K SVN ALD A+ L+EPL+IHE+MRYSL+AGGKRVRP+LC Sbjct: 64 EEGKP----TFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 119 Query: 986 IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 807 IAACELVGG+E EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE Sbjct: 120 IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 179 Query: 806 XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 627 AFEHIA +T+GVSP +IVR + ELAKSIG+EGLVAGQVVDI S GA D L+ Sbjct: 180 AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 239 Query: 626 QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 447 QLEYIH+HKTA LLE++VV+GAI+GGGSNE+VEKLR FAR IGLLFQVVDDILDVTKSS Sbjct: 240 QLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 299 Query: 446 ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 267 ELGKTAGKDL++DK TYPKL+G+EKS+ FA KLN++A+EQLS FDP KAAPL+ALANYIA Sbjct: 300 ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 359 Query: 266 YRQN 255 YRQN Sbjct: 360 YRQN 363 >gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus] Length = 369 Score = 448 bits (1153), Expect = e-123 Identities = 232/364 (63%), Positives = 280/364 (76%) Frame = -1 Query: 1346 QTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEA 1167 QTC FN A +S S F++ ++ + + +R + SS+ ISAVLT++E + Sbjct: 10 QTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPT-SSFSSISAVLTEQEAVTE 68 Query: 1166 EEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 987 +E QK FNF SYM KA SVNQALD A+LL+EP IHE+MRYSLLAGGKRVRP+LC Sbjct: 69 DEEQKST---FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLC 125 Query: 986 IAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 807 ++ACELVGGDE EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE Sbjct: 126 LSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 185 Query: 806 XXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLD 627 AFEH+A +TVGV +I+R + ELAKSIGSEGLVAGQVVDI S G +V L+ Sbjct: 186 AGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLE 245 Query: 626 QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 447 QLE+IH+HKTA LLE+SVV+GAI+GGG++E+VE+LR FARCIGLLFQ VDDILDVTKSS+ Sbjct: 246 QLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQ 305 Query: 446 ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 267 ELGKTAGKDL++DK TYP+L+G+EKS+ FA+KLN+EA+E L FDP KAAPL+ALANYIA Sbjct: 306 ELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIA 365 Query: 266 YRQN 255 YRQN Sbjct: 366 YRQN 369 >gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana] Length = 373 Score = 446 bits (1148), Expect = e-123 Identities = 236/368 (64%), Positives = 279/368 (75%) Frame = -1 Query: 1358 SPCAQTCFQFNHASKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEE 1179 S QTC FN A +S +L ++ + + +R SISS V +SAVLTKE+ Sbjct: 7 STWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISS-VSVSAVLTKED 65 Query: 1178 TLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVR 999 TL EE + FNF +YM KA SVNQALD A+ LK+P KIHE+MRYSLLAGGKRVR Sbjct: 66 TLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVR 125 Query: 998 PILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGES 819 P+LCIAACELVGG E EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE Sbjct: 126 PMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 185 Query: 818 XXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATD 639 +FEHIA +T GV P +I+R + ELA+SIG+EGLVAGQVVDI S G +D Sbjct: 186 VAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSD 245 Query: 638 VKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVT 459 V L+ LE+IH+HKTA LLE +VV+GAI+GGGSNEEVEKLR FAR IGLLFQVVDDILDVT Sbjct: 246 VGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVT 305 Query: 458 KSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALA 279 KSS+ELGKTAGKDL++DK TYPKL+G+EKS+ FA+KLNK+A++QL+ FD KAAPL+ALA Sbjct: 306 KSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALA 365 Query: 278 NYIAYRQN 255 NYIA+RQN Sbjct: 366 NYIAHRQN 373 >gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata] Length = 365 Score = 444 bits (1142), Expect = e-122 Identities = 237/355 (66%), Positives = 278/355 (78%) Frame = -1 Query: 1319 SKSAPSGFSIGSLLKRRRSSHLYWERRSKRISISSYVPISAVLTKEETLEAEEVQKKVHF 1140 S+S S F + LK S + +S+R SS+ +SAVLTK+ET++ EE ++K Sbjct: 15 SRSRSSPFKLLHPLKSHGFSFQF--SKSQRPISSSFFTVSAVLTKQETVKEEEGEEKP-- 70 Query: 1139 AFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILCIAACELVGG 960 FNF +YM K SVNQALD A+ LKEP KIHE+MRYSLLAGGKRVRP+LC+AACELVGG Sbjct: 71 TFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGG 130 Query: 959 DEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXXXXXXXXXXA 780 E EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE A Sbjct: 131 HESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFA 190 Query: 779 FEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDIGSTGATDVKLDQLEYIHIHK 600 FEHIA +TVGVS +IVR + ELAKSIGSEGLVAGQVVDI S G +DV L+QLE+IH+HK Sbjct: 191 FEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHK 250 Query: 599 TAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 420 TA LLE+SVV+GAI+GGGS+ E+EKLR FAR IGLLFQVVDDILDVTKSS+ELGKTAGKD Sbjct: 251 TAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKD 310 Query: 419 LMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIAYRQN 255 L++DK TYPKL+G+EKS+ FADKLNK+A++ LS FDP KAAPL+ALANYIA+RQN Sbjct: 311 LVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQN 365 >ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic [Vitis vinifera] Length = 368 Score = 442 bits (1138), Expect = e-122 Identities = 224/315 (71%), Positives = 260/315 (82%) Frame = -1 Query: 1199 AVLTKEETLEAEEVQKKVHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLL 1020 AVLTKEE + + ++ AFNF++Y+ KA SVN+ALD A+ ++EP+K+HESMRYSLL Sbjct: 54 AVLTKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLL 113 Query: 1019 AGGKRVRPILCIAACELVGGDEXXXXXXXXXAEMIHTMSLIHDDLPCMDNDDLRRGKPTN 840 AGGKRVRP+LCIAACELVGGDE EMIHTMSL+HDDLPCMDNDDLRRGKPTN Sbjct: 114 AGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTN 173 Query: 839 HKVYGESXXXXXXXXXXXXAFEHIANATVGVSPLKIVRVVSELAKSIGSEGLVAGQVVDI 660 HKV+GE+ AFEH+A ATVGV P IVR V ELAKSIGSEGLVAGQVVDI Sbjct: 174 HKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDI 233 Query: 659 GSTGATDVKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVV 480 S G DV L+ LEYIH+HKTA LLE +VV+GAI+GGGSNEE+EKLRKFARCIGLLFQVV Sbjct: 234 CSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVV 293 Query: 479 DDILDVTKSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKA 300 DDILDVTKSS+ELGKTAGKDL++DK TYPKL+G+EKS+ A++LNK+AK+QLS FDP KA Sbjct: 294 DDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKA 353 Query: 299 APLVALANYIAYRQN 255 APL+AL+NYIAYRQN Sbjct: 354 APLIALSNYIAYRQN 368