BLASTX nr result
ID: Coptis25_contig00003861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003861 (2395 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi... 355 3e-95 ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi... 347 6e-93 emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera] 343 2e-91 ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containi... 340 1e-90 ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|2... 334 7e-89 >ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like [Vitis vinifera] Length = 382 Score = 355 bits (911), Expect = 3e-95 Identities = 186/386 (48%), Positives = 249/386 (64%) Frame = +1 Query: 934 RLYRLFSNNIPTPQILTKTLPKEENPPKPSTNHLTKKIFAEKNLTTLVKNFKTFSERSQF 1113 RLYR FS + T L + K I+ E+NL LV+ FK SE +F Sbjct: 7 RLYRAFSTSTAATAQATGNLES-----------VFKDIYRERNLKRLVQKFKKSSELDRF 55 Query: 1114 RRSNHVYEDTVKRLASAKKHSLIEQVLEHQKKFDDITKEGFAIKLITLYGKVGMFDHALK 1293 R +YE+TV+RLASAK+ IE++LE QKK+ DI++EGFA++LITLYGK GMFDHA K Sbjct: 56 RTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDHAFK 115 Query: 1294 TYNELPELKCTRTVKSFNALLNASIKSKKFSETLKLFRELSSSLSVTPDDYSYNTVIHAY 1473 ++E+P+ KC R+V SFNALL A + SKKF + F EL S LSV PD SYN VI+ Sbjct: 116 VFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGL 175 Query: 1474 IELGNFDSAVLMMDEMEKNGVKPDLITFNTLLNGYYSKGQFSDGEFFWARMEESGVVPDI 1653 ++G+ DSAV M+DEMEK ++PDLITFNTLLNG Y+ G+F DGE W RME+ ++PDI Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDI 235 Query: 1654 ISFNTKLKGLVSGGNISEAVELVEQLGNNVEKPNLFTYNVLIKWYGNNGNLDEAKSVYDN 1833 S+N KL GLVS + E + LVE++ KP+ +++N LIK + N+G +DEA + Y Sbjct: 236 RSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGK 295 Query: 1834 MLKSDIVPDWFTFEALIPCVCEKGEFGLALKLCEKSIGSNCHVSAGIVQVVVDGLVKGSK 2013 M ++D +PD TF L+P CEKG F A +LC++ C V ++Q VDGLVKG K Sbjct: 296 MRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGK 355 Query: 2014 VEEAKGLMEIAQSKKCYRSKLKMPQE 2091 V EAK L+++ S R LK+P + Sbjct: 356 VVEAKKLVQLGNSNSYRRYNLKIPTD 381 >ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial [Vitis vinifera] Length = 383 Score = 347 bits (891), Expect = 6e-93 Identities = 185/387 (47%), Positives = 247/387 (63%), Gaps = 1/387 (0%) Frame = +1 Query: 934 RLYRLFSNNIPTPQILTKTLPKEENPPKPSTNHLTKKIFAEKNLTTLVKNFKTFSERSQF 1113 RLYR FS + T L + K I+ E+NL LV+ FK SE +F Sbjct: 7 RLYRAFSTSTAATAQATGNLES-----------VFKDIYRERNLKRLVQKFKKSSELDRF 55 Query: 1114 RRSNHVYEDTVKRLASAKKHSLIEQVLEHQKKFDDITKEGFAIKLITLYGKVGMFDHALK 1293 R +YE+TV+RLASAK+ IE++LE QKK+ DI++EGFA++LI+LYGK GMFDHA K Sbjct: 56 RTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFK 115 Query: 1294 TYNELPELKCTRTVKSFNALLNASIKSKKFSETLKLFRELSSSLSVTPDDYSYNTVIHAY 1473 ++E+P+ KC R+V SFNALL A + SKKF + F EL S LSV PD SYN VI Sbjct: 116 VFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGL 175 Query: 1474 IELGNFDSAVLMMDEMEKNGVKPDLITFNTLLNGYYSKGQFSDGEFFWARMEESGVVPDI 1653 ++G+ DSAV M+DEMEK ++PDLITFNTLLNG Y+ G+F DGE W RME+ ++PDI Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDI 235 Query: 1654 ISFNTKLKGLVSG-GNISEAVELVEQLGNNVEKPNLFTYNVLIKWYGNNGNLDEAKSVYD 1830 S+N KL GLVS + E + LVE++ KP+ +++N LIK + N+G +DEA + Y Sbjct: 236 RSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYG 295 Query: 1831 NMLKSDIVPDWFTFEALIPCVCEKGEFGLALKLCEKSIGSNCHVSAGIVQVVVDGLVKGS 2010 M ++D PD TF L+P CEKG F A +LC++ C V ++Q VDGLVKG Sbjct: 296 KMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGG 355 Query: 2011 KVEEAKGLMEIAQSKKCYRSKLKMPQE 2091 KV EAK L+++ S R LK+P + Sbjct: 356 KVVEAKKLVQLGNSNSYRRYNLKIPTD 382 >emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera] Length = 383 Score = 343 bits (879), Expect = 2e-91 Identities = 183/387 (47%), Positives = 245/387 (63%), Gaps = 1/387 (0%) Frame = +1 Query: 934 RLYRLFSNNIPTPQILTKTLPKEENPPKPSTNHLTKKIFAEKNLTTLVKNFKTFSERSQF 1113 RLYR FS + T L + K I+ E+NL LV+ FK SE +F Sbjct: 7 RLYRAFSTSTAATAQATGNLES-----------VFKDIYRERNLKRLVQKFKKSSELDRF 55 Query: 1114 RRSNHVYEDTVKRLASAKKHSLIEQVLEHQKKFDDITKEGFAIKLITLYGKVGMFDHALK 1293 R +YE+TV+RLASAK+ IE++LE QKK+ DI++EGFA++LI+LYGK GMFDHA K Sbjct: 56 RTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFK 115 Query: 1294 TYNELPELKCTRTVKSFNALLNASIKSKKFSETLKLFRELSSSLSVTPDDYSYNTVIHAY 1473 ++E+P+ KC R+V SFN LL A + SKKF + F EL S LSV PD SYN VI Sbjct: 116 VFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGL 175 Query: 1474 IELGNFDSAVLMMDEMEKNGVKPDLITFNTLLNGYYSKGQFSDGEFFWARMEESGVVPDI 1653 ++G+ DSAV M+DEMEK ++PDLITFNTLLN Y+ G+F DGE W RME+ ++PDI Sbjct: 176 CDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDI 235 Query: 1654 ISFNTKLKGLVSG-GNISEAVELVEQLGNNVEKPNLFTYNVLIKWYGNNGNLDEAKSVYD 1830 S+N KL GLVS + E + LVE++ KP+ +++N LIK + N+G +DEA + Y Sbjct: 236 RSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYG 295 Query: 1831 NMLKSDIVPDWFTFEALIPCVCEKGEFGLALKLCEKSIGSNCHVSAGIVQVVVDGLVKGS 2010 M ++D PD TF L+P CEKG F A +LC++ C V ++Q VDGLVKG Sbjct: 296 KMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGG 355 Query: 2011 KVEEAKGLMEIAQSKKCYRSKLKMPQE 2091 KV EAK L+++ S R LK+P + Sbjct: 356 KVVEAKKLVQLGNSNSYRRYNLKIPTD 382 >ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like [Cucumis sativus] Length = 398 Score = 340 bits (871), Expect = 1e-90 Identities = 178/391 (45%), Positives = 253/391 (64%), Gaps = 6/391 (1%) Frame = +1 Query: 934 RLYRLFSNN-IPTP-----QILTKTLPKEENPPKPSTNHLTKKIFAEKNLTTLVKNFKTF 1095 RL+ LF+++ PTP + +L +++ P+ LT E L LV+ F Sbjct: 9 RLHCLFNHSRSPTPAFNKPNLSLSSLATKKSKKSPTATPLTD----ENRLQKLVQRFIIN 64 Query: 1096 SERSQFRRSNHVYEDTVKRLASAKKHSLIEQVLEHQKKFDDITKEGFAIKLITLYGKVGM 1275 SE QFRR N Y+ TV+ LA KK S+IE+++E QKK+D+I +EGF I+LI LYGK GM Sbjct: 65 SESKQFRRKNDTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGM 124 Query: 1276 FDHALKTYNELPELKCTRTVKSFNALLNASIKSKKFSETLKLFRELSSSLSVTPDDYSYN 1455 F A K ++ELPELKC RTV+SFNALL + +KSK+F + K+FRE+ LS+ D SYN Sbjct: 125 FSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYN 184 Query: 1456 TVIHAYIELGNFDSAVLMMDEMEKNGVKPDLITFNTLLNGYYSKGQFSDGEFFWARMEES 1635 VI+AY E+ +FD A+L + MEKNG++PDL+TFNTLL Y KGQF DGE WARME Sbjct: 185 IVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENK 244 Query: 1636 GVVPDIISFNTKLKGLVSGGNISEAVELVEQLGNNVEKPNLFTYNVLIKWYGNNGNLDEA 1815 + PD++S+N +L+G+V I + +EL+ ++ KP++ YN LI + +G+L+EA Sbjct: 245 NIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEA 304 Query: 1816 KSVYDNMLKSDIVPDWFTFEALIPCVCEKGEFGLALKLCEKSIGSNCHVSAGIVQVVVDG 1995 K Y + +S++ P+ T+ L+P +CEKG+F L+LC+++I VQ VVDG Sbjct: 305 KKWYYKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDG 364 Query: 1996 LVKGSKVEEAKGLMEIAQSKKCYRSKLKMPQ 2088 L + SK EEAK L+E+ SK + KLK+PQ Sbjct: 365 LAEVSKTEEAKDLVELYNSKNNLKFKLKLPQ 395 >ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa] Length = 381 Score = 334 bits (856), Expect = 7e-89 Identities = 167/351 (47%), Positives = 241/351 (68%) Frame = +1 Query: 1033 LTKKIFAEKNLTTLVKNFKTFSERSQFRRSNHVYEDTVKRLASAKKHSLIEQVLEHQKKF 1212 L+ ++F E++L LV+ FK SE +FR + +Y+DT++RLA+AKK +E++LE+QK++ Sbjct: 29 LSNEVFRERSLKRLVEKFKKASENERFRTKSAIYKDTIRRLAAAKKFRYVEEILENQKQY 88 Query: 1213 DDITKEGFAIKLITLYGKVGMFDHALKTYNELPELKCTRTVKSFNALLNASIKSKKFSET 1392 D++KEGF +LI+LYG GMFD+A K ++E+ E KC RTV SFNALL A + SKKF E Sbjct: 89 QDMSKEGFNARLISLYGSSGMFDNARKVFDEMLERKCARTVLSFNALLGACVNSKKFDEV 148 Query: 1393 LKLFRELSSSLSVTPDDYSYNTVIHAYIELGNFDSAVLMMDEMEKNGVKPDLITFNTLLN 1572 LFR LS L + PD SYNTV+ A+ E+G+ DSAV ++DE+EK G+KPDLITFNTLLN Sbjct: 149 GGLFRGLSEELEIEPDLVSYNTVMKAFCEMGSLDSAVSLLDEIEKKGLKPDLITFNTLLN 208 Query: 1573 GYYSKGQFSDGEFFWARMEESGVVPDIISFNTKLKGLVSGGNISEAVELVEQLGNNVEKP 1752 G Y+ G+F GE W RM+E V PD S+N KL GL + +A ++VE++ + + Sbjct: 209 GLYANGRFDAGERIWQRMKEKNVKPDGRSYNEKLLGLALEKRMKDATKVVEEMKSEGIEF 268 Query: 1753 NLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCEKGEFGLALKLC 1932 ++F+YN LI+ + N G+L+EAK Y + KSDI PD TF+ LIP V EKG+ A LC Sbjct: 269 DIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPDKLTFKTLIPFVVEKGDVAFAFDLC 328 Query: 1933 EKSIGSNCHVSAGIVQVVVDGLVKGSKVEEAKGLMEIAQSKKCYRSKLKMP 2085 + ++ S V ++Q V+D L K SK+ EAK L+E++++++ KL +P Sbjct: 329 KDALSSKLAVKEALIQPVLDALAKESKINEAKELVELSKARRSDSLKLTLP 379