BLASTX nr result

ID: Coptis25_contig00003860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003860
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283666.1| PREDICTED: probable salt tolerance-like prot...   299   2e-78
ref|XP_002316844.1| predicted protein [Populus trichocarpa] gi|2...   291   4e-76
ref|XP_003540510.1| PREDICTED: probable salt tolerance-like prot...   286   1e-74
ref|XP_002524543.1| zinc finger protein, putative [Ricinus commu...   280   6e-73
ref|XP_003543187.1| PREDICTED: probable salt tolerance-like prot...   276   8e-72

>ref|XP_002283666.1| PREDICTED: probable salt tolerance-like protein At1g78600 [Vitis
            vinifera] gi|302142816|emb|CBI20111.3| unnamed protein
            product [Vitis vinifera]
          Length = 293

 Score =  299 bits (765), Expect = 2e-78
 Identities = 170/299 (56%), Positives = 198/299 (66%), Gaps = 5/299 (1%)
 Frame = -3

Query: 1445 MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 1266
            MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL+ +SSSQMPKCDI
Sbjct: 1    MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS-TSSSQMPKCDI 59

Query: 1265 CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 1086
            CQ+TVGYFFCLEDRALLCRKCDVSIHTANTYVS+HQRFLLTGVKVGLE T+P  SS+   
Sbjct: 60   CQETVGYFFCLEDRALLCRKCDVSIHTANTYVSAHQRFLLTGVKVGLEPTQPGSSSSMGK 119

Query: 1085 SNSIG--APAEKLXXXXXXXXXSQNGENNEVLSRQVGVGA---VPAPKLXXXXXXXXXSI 921
            SN +G  +  E               + N+ LS Q G GA   VP             SI
Sbjct: 120  SNLVGKHSETESPSASRRGAPMPLTCDYNKTLSIQAG-GAGDFVPTKVSFAGGSGSTESI 178

Query: 920  TDWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXX 741
              W +D+   L +F+ ++  M++G+SKAD GKLG SD S + + A+E  + DD       
Sbjct: 179  PQWHIDELFGLNEFNQTYDCMDNGTSKADIGKLGDSDCSPTLRAADEELNFDDCLGQVPE 238

Query: 740  XXXXXXXXXXXPTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRYQPNHTISKYRR 564
                       PTASGL+WPKSS+ S SD SVFVPD+C S  Q       N + +K RR
Sbjct: 239  TTWMVPQISSPPTASGLYWPKSSQIS-SDTSVFVPDICYSPVQ-----MQNESATKCRR 291


>ref|XP_002316844.1| predicted protein [Populus trichocarpa] gi|222859909|gb|EEE97456.1|
            predicted protein [Populus trichocarpa]
          Length = 298

 Score =  291 bits (744), Expect = 4e-76
 Identities = 162/302 (53%), Positives = 196/302 (64%), Gaps = 8/302 (2%)
 Frame = -3

Query: 1445 MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 1266
            MKIQCNVCEAAEA VLCCADEAALCW CDEKVHAANKLASKHQR+PL+ +SS QMPKCDI
Sbjct: 1    MKIQCNVCEAAEAKVLCCADEAALCWTCDEKVHAANKLASKHQRIPLS-TSSPQMPKCDI 59

Query: 1265 CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 1086
            CQ+T G+FFCLEDRALLCRKCDV+IHTANT+VS HQRFLLTGVKVGLE T+P  SS+   
Sbjct: 60   CQETAGFFFCLEDRALLCRKCDVAIHTANTHVSVHQRFLLTGVKVGLEPTDPGASSSSGK 119

Query: 1085 SNSIGAPAEKLXXXXXXXXXSQNG-------ENNEVLSRQV-GVGAVPAPKLXXXXXXXX 930
            S S     EK          S+ G         N+V +  V GVG     KL        
Sbjct: 120  SPS----GEKKTLETKSRPVSRRGTLLPLANPCNQVSTVNVCGVGDFGPAKLPYSGGSAT 175

Query: 929  XSITDWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXX 750
             SI+ W +D+FL L +F+ ++G++++GSSKADSGK G SD S   +   E  D ++    
Sbjct: 176  SSISQWHIDEFLDLPEFNQNYGYIDNGSSKADSGKRGDSDCSAILRSTEEEVDDEECLGQ 235

Query: 749  XXXXXXXXXXXXXXPTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRYQPNHTISKY 570
                          PTASGL+WPKS  N  S+ ++FVPD+CCS  QN    +   T+SK 
Sbjct: 236  VPDSSRAVPQIPSPPTASGLYWPKSFHNH-SETAIFVPDICCSVVQNCHYSEQRGTVSKR 294

Query: 569  RR 564
            +R
Sbjct: 295  QR 296


>ref|XP_003540510.1| PREDICTED: probable salt tolerance-like protein At1g78600-like
            isoform 1 [Glycine max]
          Length = 374

 Score =  286 bits (732), Expect = 1e-74
 Identities = 157/287 (54%), Positives = 185/287 (64%), Gaps = 3/287 (1%)
 Frame = -3

Query: 1454 VIKMKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPK 1275
            V +MKIQCNVCEAAEA VLCCADEA LCW CDEKVHAANKLASKHQRVPL+ +SSS MPK
Sbjct: 80   VERMKIQCNVCEAAEAKVLCCADEAGLCWECDEKVHAANKLASKHQRVPLS-TSSSHMPK 138

Query: 1274 CDICQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSST 1095
            CDICQ+ +GYFFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGV+VGLE T+P  SST
Sbjct: 139  CDICQEALGYFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVRVGLEATDPGASST 198

Query: 1094 KEMSNSIGAPAEKLXXXXXXXXXSQNGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXSIT 918
               S+S G                Q    NEVL  +V GVG  P+ K+         +I+
Sbjct: 199  SLKSDS-GEKVSDSSVSRKVSTAPQPSNYNEVLPAEVGGVGEFPSAKVSFGGGSTAGNIS 257

Query: 917  DWPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXX 738
             W +D+F+ L +FS ++ +ME GSS+AD GKLG SD  +   G  E  + DDY       
Sbjct: 258  QWTIDEFIGLNEFSQNYDYME-GSSRADGGKLGDSDSPVLRSGEEEMEEEDDYLERVPDS 316

Query: 737  XXXXXXXXXXPTASGLFWPKSSRN--SPSDNSVFVPDVCCSSPQNFQ 603
                      PT+SGL WPK   N    SD+ +FVPD+  S  Q  Q
Sbjct: 317  SWTVPQIPSPPTSSGLCWPKDHTNLYGSSDSVLFVPDISFSHLQQSQ 363


>ref|XP_002524543.1| zinc finger protein, putative [Ricinus communis]
            gi|223536217|gb|EEF37870.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 290

 Score =  280 bits (717), Expect = 6e-73
 Identities = 154/286 (53%), Positives = 184/286 (64%), Gaps = 3/286 (1%)
 Frame = -3

Query: 1445 MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 1266
            MKIQCNVCEAAEANVLCCADEAALCW CDEKVHAANKLASKHQRVPL+ +SSS +P CDI
Sbjct: 1    MKIQCNVCEAAEANVLCCADEAALCWGCDEKVHAANKLASKHQRVPLS-TSSSHIPNCDI 59

Query: 1265 CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGSSTKEM 1086
            CQ+T G+FFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGVKVGLE T+   SS+   
Sbjct: 60   CQETAGFFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVKVGLEPTDLGASSSSGK 119

Query: 1085 SNSIGAPAEKLXXXXXXXXXSQ--NGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXSITD 915
            S S    +E +                +N  L  QV G G V   K+          +  
Sbjct: 120  SPSSEKTSEMISHSVSRRGNPMPVASPHNYALPAQVSGAGEVEQAKV-SYFGGAAGGMPP 178

Query: 914  WPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXXX 735
            W +D+FL L+DF+ ++G M++GSSKADSGK   S+ S   + A+E  D D+         
Sbjct: 179  WQIDEFLGLSDFNQNYGNMDNGSSKADSGKRSDSESSAFLRSADEEVDGDECLGQVPDSS 238

Query: 734  XXXXXXXXXPTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQRY 597
                     PT+SGL+WPK   N  SD + FVPD+CCS+ QN   Y
Sbjct: 239  WAVPQIPSPPTSSGLYWPKRIHNQ-SDGADFVPDICCSTLQNHHHY 283


>ref|XP_003543187.1| PREDICTED: probable salt tolerance-like protein At1g78600-like
            [Glycine max]
          Length = 293

 Score =  276 bits (707), Expect = 8e-72
 Identities = 154/284 (54%), Positives = 181/284 (63%), Gaps = 3/284 (1%)
 Frame = -3

Query: 1445 MKIQCNVCEAAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLTNSSSSQMPKCDI 1266
            MKIQCNVCEAAEA VLCCADEAALCW CDEKVHAANKLASKHQRVPL+ +SSS MPKCDI
Sbjct: 1    MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLS-TSSSHMPKCDI 59

Query: 1265 CQDTVGYFFCLEDRALLCRKCDVSIHTANTYVSSHQRFLLTGVKVGLETTEPVGS--STK 1092
            CQ+ +GYFFCLEDRALLCRKCDV+IHTAN YVS HQRFLLTGV+VGLE  +P  S  S K
Sbjct: 60   CQEALGYFFCLEDRALLCRKCDVAIHTANAYVSGHQRFLLTGVRVGLEAIDPGASLTSLK 119

Query: 1091 EMSNSIGAPAEKLXXXXXXXXXSQNGENNEVLSRQV-GVGAVPAPKLXXXXXXXXXSITD 915
              S    +  +            Q    NEVL  +V GVG  P  K+         +I+ 
Sbjct: 120  SDSGEKVSDTKSSSVSRKVSTVPQPSNYNEVLPIEVGGVGEFPPAKVSFGGGSTDGNISQ 179

Query: 914  WPLDDFLVLTDFSNSFGFMEHGSSKADSGKLGGSDFSLSSQGANERFDMDDYSXXXXXXX 735
            W +D+F+ L +FS  + +ME GSS+AD GKLG SD  +   G  +  + DDY        
Sbjct: 180  WTIDEFIGLNEFSQHYDYME-GSSRADGGKLGDSDSPVLKSGEEDMEEEDDYLERVPDSS 238

Query: 734  XXXXXXXXXPTASGLFWPKSSRNSPSDNSVFVPDVCCSSPQNFQ 603
                     PTASGL WPK  + S SD+ +FVPD+  S  Q  Q
Sbjct: 239  WTVPQIPSPPTASGLCWPKDPQYS-SDSVLFVPDISFSLIQQSQ 281


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