BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003854
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   219   5e-55
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   218   1e-54
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   209   6e-52
ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycin...   208   2e-51
gb|AFK39972.1| unknown [Lotus japonicus]                              207   3e-51

>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  219 bits (559), Expect = 5e-55
 Identities = 109/140 (77%), Positives = 119/140 (85%)
 Frame = +1

Query: 244 TGKNKXXXXXXXXXNMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQK 423
           T K+K         NMDVELGK P+SGDP KMA MQAILSQFTEEQMSRYESFRRSGFQK
Sbjct: 59  TAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQK 118

Query: 424 ANMKKLIASVTGSPKVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREA 603
           ANMKKL+ S+TGS K+S PMTIV SGIAKMFVGELVE  R+VM ERKETGP+RPCHIREA
Sbjct: 119 ANMKKLLVSITGSQKISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREA 178

Query: 604 YRRLKLDGKIPKRSVPRLFR 663
           YRRLKL+GK+P+RSV RLFR
Sbjct: 179 YRRLKLEGKVPRRSVSRLFR 198


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  218 bits (556), Expect = 1e-54
 Identities = 106/142 (74%), Positives = 123/142 (86%)
 Frame = +1

Query: 238 NTTGKNKXXXXXXXXXNMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGF 417
           +T  K K         N++VEL KFPSSGDPDKMA MQAILSQFTEEQMSRYESFRR+GF
Sbjct: 79  STAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGF 138

Query: 418 QKANMKKLIASVTGSPKVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIR 597
           QKANMK+L+AS++G+ K+SVPMTIVVSGIAKMFVGELVE  R+VM ER +TGP+RPCH+R
Sbjct: 139 QKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLR 198

Query: 598 EAYRRLKLDGKIPKRSVPRLFR 663
           EAYRRLKL+GKIP++SVPRLFR
Sbjct: 199 EAYRRLKLEGKIPRKSVPRLFR 220


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  209 bits (533), Expect = 6e-52
 Identities = 101/126 (80%), Positives = 114/126 (90%)
 Frame = +1

Query: 286 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 465
           N+DVEL KFPS+ DPDKMA MQAILSQFTE QM+RYESFRRS  QKANM++L+ S+TGS 
Sbjct: 80  NVDVELAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGSQ 139

Query: 466 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 645
           K+S+PMTIVV GIAKMFVGELVE  RIVM ERKE+GP+RPCHIREAYRRLKL+GK+PKRS
Sbjct: 140 KISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRS 199

Query: 646 VPRLFR 663
           VPRLFR
Sbjct: 200 VPRLFR 205


>ref|NP_001236012.1| uncharacterized protein LOC100305481 [Glycine max]
           gi|255625637|gb|ACU13163.1| unknown [Glycine max]
          Length = 155

 Score =  208 bits (529), Expect = 2e-51
 Identities = 102/126 (80%), Positives = 115/126 (91%)
 Frame = +1

Query: 286 NMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKANMKKLIASVTGSP 465
           NMDVEL K PS+GDP KMA MQAILSQFTEEQMSRYESFRR+GFQKANMK+L+AS+TG+ 
Sbjct: 30  NMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQ 89

Query: 466 KVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAYRRLKLDGKIPKRS 645
           K+SVPMTIVVSGIAKMFVGE+VE  RIVM ERKE+GP+RPCH+REAYRRLKL+GK+ KRS
Sbjct: 90  KISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRS 149

Query: 646 VPRLFR 663
             RLFR
Sbjct: 150 SSRLFR 155


>gb|AFK39972.1| unknown [Lotus japonicus]
          Length = 205

 Score =  207 bits (527), Expect = 3e-51
 Identities = 102/139 (73%), Positives = 118/139 (84%)
 Frame = +1

Query: 247 GKNKXXXXXXXXXNMDVELGKFPSSGDPDKMAMMQAILSQFTEEQMSRYESFRRSGFQKA 426
           GKNK         NMDVEL K   +GDP KMA MQAILSQFTEEQMSRYESFRR+GFQKA
Sbjct: 67  GKNKDDEEEEEEDNMDVELTKLQPTGDPQKMAKMQAILSQFTEEQMSRYESFRRAGFQKA 126

Query: 427 NMKKLIASVTGSPKVSVPMTIVVSGIAKMFVGELVEIGRIVMNERKETGPLRPCHIREAY 606
           NMK+L+AS+TG+ K+++P+TIVVSGIAKMFVGE+VE  RIV+ ERKE GP+RPCH+REAY
Sbjct: 127 NMKRLLASITGTQKITIPITIVVSGIAKMFVGEVVETARIVIKERKEFGPIRPCHLREAY 186

Query: 607 RRLKLDGKIPKRSVPRLFR 663
           RRLKL+GK+ KRSVPRLFR
Sbjct: 187 RRLKLEGKVFKRSVPRLFR 205