BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003849
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              303   4e-80
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   297   4e-78
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   282   9e-74
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   273   7e-71
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   265   1e-68

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  303 bits (777), Expect = 4e-80
 Identities = 149/217 (68%), Positives = 174/217 (80%), Gaps = 3/217 (1%)
 Frame = -1

Query: 1064 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 888
            M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1    MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 887  ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 714
            ASYDRYLR+ Q+P+YG +SGR L GG+  HP DD R+ GVRG D               +
Sbjct: 61   ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120

Query: 713  PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 534
            PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV
Sbjct: 121  PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 180

Query: 533  DFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423
            DF +PA AATAMDALQGYKFDEHDRDS NLRLQFARY
Sbjct: 181  DFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARY 217


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  297 bits (760), Expect = 4e-78
 Identities = 148/217 (68%), Positives = 173/217 (79%), Gaps = 3/217 (1%)
 Frame = -1

Query: 1064 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 888
            M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG
Sbjct: 1    MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 887  ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 714
            ASYDRYLR+  +P+YG +SGR L GG+  HP DD R+ GVRG D               +
Sbjct: 61   ASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 119

Query: 713  PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 534
            PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV
Sbjct: 120  PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 179

Query: 533  DFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423
            DF +PA AATAMDALQGYKFDEHDRDS NLRLQFARY
Sbjct: 180  DFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARY 216


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  282 bits (722), Expect = 9e-74
 Identities = 141/220 (64%), Positives = 167/220 (75%), Gaps = 6/220 (2%)
 Frame = -1

Query: 1064 MGDAYWRYNEARQAP---LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 894
            M DAYWRY ++RQ P   L  +  KR+RSDYD+P GHE+PSY+SR+DER + R + +TD+
Sbjct: 1    MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 893  IGASYDRYLRSGQIPTYG--ESGRSLGGGMIGHPADDMRMSGVRGFDPMXXXXXXXXXXX 720
            IGASYDRYLRS Q+ +YG  +S R + GGM     DD R+ G+   +P            
Sbjct: 61   IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 719  XK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 543
               PE+PLP DAS+TLFVEGLP NCTRREV+HIFRPFVG+KEVRLVSKE+RHPGGD LVL
Sbjct: 121  GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 542  CFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423
            CFVDF +PA AATAMDALQGYKFDEHDRDS +LRLQFARY
Sbjct: 181  CFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARY 220


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
            guineensis]
          Length = 294

 Score =  273 bits (697), Expect = 7e-71
 Identities = 143/237 (60%), Positives = 166/237 (70%), Gaps = 19/237 (8%)
 Frame = -1

Query: 1076 EK*RMGDAYWRYNEARQAPL----PPVALKRARSDY-DMPGGHEMPSYYSREDERASYRL 912
            E+ RM DAYWRY++ R        P   LKR R+DY D+PGG E+  YYSR++ER  +R 
Sbjct: 31   ERPRMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRT 90

Query: 911  VGETDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGVRGFD--------- 759
            + +T++I ASYDRYLR+G     GES R++ GGM GHP DD RM GV G D         
Sbjct: 91   IRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGG 150

Query: 758  ----PMXXXXXXXXXXXXK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEV 594
                P+              PE PLP DASNTLFVEGLP NCTRREVSHIFRPFVGF+EV
Sbjct: 151  RPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREV 210

Query: 593  RLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423
            RLV+KE+RHPGGD LVLCFVDF TPAQAA A+DALQGYKFDEHDR+S NLRLQFAR+
Sbjct: 211  RLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESANLRLQFARF 267


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223545062|gb|EEF46575.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 232

 Score =  265 bits (678), Expect = 1e-68
 Identities = 135/220 (61%), Positives = 166/220 (75%), Gaps = 6/220 (2%)
 Frame = -1

Query: 1064 MGDAYWRYNEARQA---PLPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 894
            M DAYWRY++ARQ    P+P +  KR+RSDYD+  GHE+P+YY+R+D+R + R + +TD+
Sbjct: 1    MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 893  IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXX 723
            IGASYDRYLRS  I +Y  G+S R + G +    ADD R+ G+ G DP            
Sbjct: 61   IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119

Query: 722  XXKPEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 543
              +PE  LP DA++TLFVEGLP +C+RREV+HIFRPFVG+KEVRLVSKE+R PGGD LVL
Sbjct: 120  SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179

Query: 542  CFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423
            CFVDF +PA AATAMDALQGYKFDEHDRDS +LRLQFARY
Sbjct: 180  CFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARY 219