BLASTX nr result
ID: Coptis25_contig00003849
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003849 (1109 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23047.3| unnamed protein product [Vitis vinifera] 303 4e-80 ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265... 297 4e-78 gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel... 282 9e-74 gb|AEZ00900.1| putative RNA recognition motif-containing protein... 273 7e-71 ref|XP_002515833.1| nucleic acid binding protein, putative [Rici... 265 1e-68 >emb|CBI23047.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 303 bits (777), Expect = 4e-80 Identities = 149/217 (68%), Positives = 174/217 (80%), Gaps = 3/217 (1%) Frame = -1 Query: 1064 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 888 M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60 Query: 887 ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 714 ASYDRYLR+ Q+P+YG +SGR L GG+ HP DD R+ GVRG D + Sbjct: 61 ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 120 Query: 713 PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 534 PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV Sbjct: 121 PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 180 Query: 533 DFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423 DF +PA AATAMDALQGYKFDEHDRDS NLRLQFARY Sbjct: 181 DFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARY 217 >ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera] Length = 229 Score = 297 bits (760), Expect = 4e-78 Identities = 148/217 (68%), Positives = 173/217 (79%), Gaps = 3/217 (1%) Frame = -1 Query: 1064 MGDAYWRYNEARQAP-LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDNIG 888 M D YWRY E RQ P +P ++ KR RSDYD+PGGH++PSY+SREDERA++R + ++D+IG Sbjct: 1 MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60 Query: 887 ASYDRYLRSGQIPTYG-ESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXXXXK 714 ASYDRYLR+ +P+YG +SGR L GG+ HP DD R+ GVRG D + Sbjct: 61 ASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGGR 119 Query: 713 PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVLCFV 534 PE+PLP DAS+TLFVEGLP NCTRREVSHIFRPFVG+KEVRLVSKE+RH GGD LVLCFV Sbjct: 120 PELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFV 179 Query: 533 DFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423 DF +PA AATAMDALQGYKFDEHDRDS NLRLQFARY Sbjct: 180 DFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARY 216 >gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra] Length = 233 Score = 282 bits (722), Expect = 9e-74 Identities = 141/220 (64%), Positives = 167/220 (75%), Gaps = 6/220 (2%) Frame = -1 Query: 1064 MGDAYWRYNEARQAP---LPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 894 M DAYWRY ++RQ P L + KR+RSDYD+P GHE+PSY+SR+DER + R + +TD+ Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60 Query: 893 IGASYDRYLRSGQIPTYG--ESGRSLGGGMIGHPADDMRMSGVRGFDPMXXXXXXXXXXX 720 IGASYDRYLRS Q+ +YG +S R + GGM DD R+ G+ +P Sbjct: 61 IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120 Query: 719 XK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 543 PE+PLP DAS+TLFVEGLP NCTRREV+HIFRPFVG+KEVRLVSKE+RHPGGD LVL Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180 Query: 542 CFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423 CFVDF +PA AATAMDALQGYKFDEHDRDS +LRLQFARY Sbjct: 181 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARY 220 >gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis guineensis] Length = 294 Score = 273 bits (697), Expect = 7e-71 Identities = 143/237 (60%), Positives = 166/237 (70%), Gaps = 19/237 (8%) Frame = -1 Query: 1076 EK*RMGDAYWRYNEARQAPL----PPVALKRARSDY-DMPGGHEMPSYYSREDERASYRL 912 E+ RM DAYWRY++ R P LKR R+DY D+PGG E+ YYSR++ER +R Sbjct: 31 ERPRMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRT 90 Query: 911 VGETDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGVRGFD--------- 759 + +T++I ASYDRYLR+G GES R++ GGM GHP DD RM GV G D Sbjct: 91 IRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGG 150 Query: 758 ----PMXXXXXXXXXXXXK-PEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEV 594 P+ PE PLP DASNTLFVEGLP NCTRREVSHIFRPFVGF+EV Sbjct: 151 RPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREV 210 Query: 593 RLVSKEARHPGGDQLVLCFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423 RLV+KE+RHPGGD LVLCFVDF TPAQAA A+DALQGYKFDEHDR+S NLRLQFAR+ Sbjct: 211 RLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESANLRLQFARF 267 >ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis] gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis] Length = 232 Score = 265 bits (678), Expect = 1e-68 Identities = 135/220 (61%), Positives = 166/220 (75%), Gaps = 6/220 (2%) Frame = -1 Query: 1064 MGDAYWRYNEARQA---PLPPVALKRARSDYDMPGGHEMPSYYSREDERASYRLVGETDN 894 M DAYWRY++ARQ P+P + KR+RSDYD+ GHE+P+YY+R+D+R + R + +TD+ Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60 Query: 893 IGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRMSGVRGFDP-MXXXXXXXXXX 723 IGASYDRYLRS I +Y G+S R + G + ADD R+ G+ G DP Sbjct: 61 IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119 Query: 722 XXKPEIPLPADASNTLFVEGLPGNCTRREVSHIFRPFVGFKEVRLVSKEARHPGGDQLVL 543 +PE LP DA++TLFVEGLP +C+RREV+HIFRPFVG+KEVRLVSKE+R PGGD LVL Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179 Query: 542 CFVDFGTPAQAATAMDALQGYKFDEHDRDSDNLRLQFARY 423 CFVDF +PA AATAMDALQGYKFDEHDRDS +LRLQFARY Sbjct: 180 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARY 219