BLASTX nr result

ID: Coptis25_contig00003839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003839
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275969.2| PREDICTED: putative multidrug resistance pro...   201   2e-49
ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   189   8e-46
ref|XP_004142341.1| PREDICTED: ABC transporter B family member 1...   189   8e-46
ref|XP_003618400.1| ABC transporter B family member [Medicago tr...   189   8e-46
ref|XP_002309006.1| multidrug/pheromone exporter, MDR family, AB...   189   8e-46

>ref|XP_002275969.2| PREDICTED: putative multidrug resistance protein-like [Vitis
            vinifera]
          Length = 1283

 Score =  201 bits (510), Expect = 2e-49
 Identities = 104/163 (63%), Positives = 124/163 (76%)
 Frame = -2

Query: 539  LFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKPQKLDG 360
            LFQTFFILV TGR+IAE G++T+DLSKG +A+KSVF  L+RKSKM PD+ +GIKP+KL G
Sbjct: 960  LFQTFFILVATGRLIAETGSMTADLSKGTNALKSVFMTLERKSKMDPDEIKGIKPEKLIG 1019

Query: 359  SIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYDPLKGS 180
             I+  +V F YP+ PKQ+I MG+SL+VD+   VAL              IERFYDP KGS
Sbjct: 1020 DIEFKEVDFFYPTRPKQMILMGVSLKVDAGKVVALVGQSGSGKSTVIRMIERFYDPSKGS 1079

Query: 179  VVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYGKE 51
            + +DG+DIK YNLRALR HIALVSQEPTLFAGTI ENI Y KE
Sbjct: 1080 IEVDGIDIKHYNLRALRLHIALVSQEPTLFAGTIQENIAYAKE 1122



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 49/164 (29%), Positives = 85/164 (51%)
 Frame = -2

Query: 539 LFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKPQKLDG 360
           +F T   ++  G  +          ++   A   +  +++R   +   D +G    ++ G
Sbjct: 323 VFTTGVCIIYGGLALGSSFLNVKHFTEANAAAALILEMIERVPSIDSADQQGKTITEVKG 382

Query: 359 SIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYDPLKGS 180
            +   ++ F+YPS P  ++    +L+V +  TV L              ++RFYDPL G 
Sbjct: 383 ELVFEEIDFAYPSRPGNLVLRKFNLKVVACQTVGLVGSSGSGKSTVINLLQRFYDPLGGE 442

Query: 179 VVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYGKEK 48
           +++DG+ IKS  L+ LRS + LV+QEP LFA T+ ENI++GKE+
Sbjct: 443 ILLDGIGIKSLQLKWLRSQMGLVAQEPILFATTVKENILFGKEE 486


>ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            15-like [Cucumis sativus]
          Length = 946

 Score =  189 bits (479), Expect = 8e-46
 Identities = 96/164 (58%), Positives = 121/164 (73%)
 Frame = -2

Query: 539  LFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKPQKLDG 360
            LF+TF ILV+TGRVIA+ G++TSDL+KG +AV SVF +L R +K+ PDDPEG KP KL G
Sbjct: 641  LFETFMILVSTGRVIADAGSMTSDLAKGSEAVGSVFDVLDRFTKIEPDDPEGYKPNKLIG 700

Query: 359  SIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYDPLKGS 180
             I++ +V F+YPS P+ +IF G S+ +++  + AL              IERFYDP+KG+
Sbjct: 701  QIEINNVDFNYPSRPEAMIFRGFSISIEAGKSTALVGQSGSGKSTIIGLIERFYDPIKGT 760

Query: 179  VVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYGKEK 48
            + IDG DIKSY+LR LR HIALVSQEPTLFAGTI ENIIYG  K
Sbjct: 761  INIDGRDIKSYHLRTLRKHIALVSQEPTLFAGTIRENIIYGVSK 804



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 50/137 (36%), Positives = 78/137 (56%)
 Frame = -2

Query: 449 AVKSVFTILKRKSKMHPDDPEGIKPQKLDGSIQLADVYFSYPSLPKQVIFMGLSLEVDSR 270
           A + +  ++ R  K+   D EG   + + G +Q  +V+F+YPS P   +   L+L + + 
Sbjct: 32  AGERIMEVINRVPKIDSADMEGQILRNISGQVQFTNVHFAYPSRPDTTVLNDLTLTIPAG 91

Query: 269 TTVALXXXXXXXXXXXXXXIERFYDPLKGSVVIDGVDIKSYNLRALRSHIALVSQEPTLF 90
            TVAL              ++RFYDP+ GS+ +DG+ I+   L+ LRS + LVSQEP LF
Sbjct: 92  QTVALVGGSGSGKSTVISLLQRFYDPISGSISVDGIGIEKLQLKWLRSQMGLVSQEPALF 151

Query: 89  AGTIHENIIYGKEKGRL 39
             +I ENI++GKE G +
Sbjct: 152 GTSIKENILFGKEDGSM 168


>ref|XP_004142341.1| PREDICTED: ABC transporter B family member 15-like [Cucumis sativus]
          Length = 1251

 Score =  189 bits (479), Expect = 8e-46
 Identities = 96/164 (58%), Positives = 121/164 (73%)
 Frame = -2

Query: 539  LFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKPQKLDG 360
            LF+TF ILV+TGRVIA+ G++TSDL+KG +AV SVF +L R +K+ PDDPEG KP KL G
Sbjct: 946  LFETFMILVSTGRVIADAGSMTSDLAKGSEAVGSVFDVLDRFTKIEPDDPEGYKPNKLIG 1005

Query: 359  SIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYDPLKGS 180
             I++ +V F+YPS P+ +IF G S+ +++  + AL              IERFYDP+KG+
Sbjct: 1006 QIEINNVDFNYPSRPEAMIFRGFSISIEAGKSTALVGQSGSGKSTIIGLIERFYDPIKGT 1065

Query: 179  VVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYGKEK 48
            + IDG DIKSY+LR LR HIALVSQEPTLFAGTI ENIIYG  K
Sbjct: 1066 INIDGRDIKSYHLRTLRKHIALVSQEPTLFAGTIRENIIYGVSK 1109



 Score =  100 bits (250), Expect = 3e-19
 Identities = 50/137 (36%), Positives = 79/137 (57%)
 Frame = -2

Query: 449 AVKSVFTILKRKSKMHPDDPEGIKPQKLDGSIQLADVYFSYPSLPKQVIFMGLSLEVDSR 270
           A + +  ++ R  K+   D EG   + + G +Q  +V+F+YPS P  ++   L+L + + 
Sbjct: 336 AGERIMEVINRVPKIDSADMEGQILRNISGQVQFTNVHFAYPSRPDTIVLNDLTLTIPAG 395

Query: 269 TTVALXXXXXXXXXXXXXXIERFYDPLKGSVVIDGVDIKSYNLRALRSHIALVSQEPTLF 90
            TVAL              ++RFYDP+ GS+ +DG+ I+   L+ LRS + LVSQEP LF
Sbjct: 396 QTVALVGGSGSGKSTVISLLQRFYDPISGSISVDGIGIEKLQLKWLRSQMGLVSQEPALF 455

Query: 89  AGTIHENIIYGKEKGRL 39
             +I ENI++GKE G +
Sbjct: 456 GTSIKENILFGKEDGSM 472


>ref|XP_003618400.1| ABC transporter B family member [Medicago truncatula]
           gi|355493415|gb|AES74618.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 771

 Score =  189 bits (479), Expect = 8e-46
 Identities = 97/166 (58%), Positives = 121/166 (72%)
 Frame = -2

Query: 554 VSQ*GLFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKP 375
           +S   LF+TF ILVTTG+VIA+ G++T+DL+KG DA++SVFTIL R +K+ PD+ EG K 
Sbjct: 449 ISAKALFKTFIILVTTGKVIADAGSMTNDLAKGSDAIESVFTILDRYTKIDPDEIEGYKA 508

Query: 374 QKLDGSIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYD 195
           +KL G I+  DVYF+YPS P  +IF G S+++D+  + AL              IERFYD
Sbjct: 509 EKLIGKIEFCDVYFAYPSRPNVMIFEGFSIKIDAGKSTALVGESGSGKSTIIGLIERFYD 568

Query: 194 PLKGSVVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYG 57
           PLKG V IDG DIK YNLR+LR HIALVSQEPTLF+GTI ENI YG
Sbjct: 569 PLKGIVTIDGRDIKIYNLRSLRKHIALVSQEPTLFSGTIKENIAYG 614


>ref|XP_002309006.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222854982|gb|EEE92529.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1239

 Score =  189 bits (479), Expect = 8e-46
 Identities = 93/163 (57%), Positives = 121/163 (74%)
 Frame = -2

Query: 539  LFQTFFILVTTGRVIAEVGTVTSDLSKGRDAVKSVFTILKRKSKMHPDDPEGIKPQKLDG 360
            LFQTF ILVTTGR+IAE GT+T+DLSKG  A++SVF ILKR++K+ P+  +GIKP+K++G
Sbjct: 934  LFQTFLILVTTGRLIAETGTITADLSKGTSALESVFRILKRRTKIDPEHSDGIKPEKING 993

Query: 359  SIQLADVYFSYPSLPKQVIFMGLSLEVDSRTTVALXXXXXXXXXXXXXXIERFYDPLKGS 180
             I+   V+F YP+ PKQ+I  G++L++D+    A+              IERFYD   GS
Sbjct: 994  EIEFKQVHFFYPNRPKQMILTGVNLQIDAAKVAAIVGRSGSGKSTIIKLIERFYDTSSGS 1053

Query: 179  VVIDGVDIKSYNLRALRSHIALVSQEPTLFAGTIHENIIYGKE 51
            + +D ++IKSYNLRALRSHIALVSQEPTLFAGTI +NI Y KE
Sbjct: 1054 IDVDSINIKSYNLRALRSHIALVSQEPTLFAGTIRDNIAYAKE 1096



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 46/137 (33%), Positives = 76/137 (55%)
 Frame = -2

Query: 449 AVKSVFTILKRKSKMHPDDPEGIKPQKLDGSIQLADVYFSYPSLPKQVIFMGLSLEVDSR 270
           A   +F ++ R   +      G    ++ G ++  ++ F YPS P  ++    +L+V + 
Sbjct: 328 AASRIFEMIHRVVDIDSAKELGKTMSEVKGEVEFRNIDFEYPSRPGSLVLSKFNLKVMAY 387

Query: 269 TTVALXXXXXXXXXXXXXXIERFYDPLKGSVVIDGVDIKSYNLRALRSHIALVSQEPTLF 90
            TV L              +E+FY+PL+G +++DGVDIK+  L+ LRS + LVSQEP LF
Sbjct: 388 QTVGLVGRSGSGKSTVINLLEKFYEPLRGHILLDGVDIKTLQLKWLRSQMGLVSQEPILF 447

Query: 89  AGTIHENIIYGKEKGRL 39
           A +I +NI +GKE+  +
Sbjct: 448 ATSIKQNICFGKEEASM 464


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