BLASTX nr result
ID: Coptis25_contig00003832
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003832
(1403 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27263.3| unnamed protein product [Vitis vinifera] 540 e-151
ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-... 540 e-151
ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|2... 521 e-145
gb|AFK35605.1| unknown [Lotus japonicus] 514 e-143
ref|XP_003614041.1| COBW domain-containing protein [Medicago tru... 507 e-141
>emb|CBI27263.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 540 bits (1392), Expect = e-151
Identities = 266/337 (78%), Positives = 303/337 (89%)
Frame = +3
Query: 45 TIITGYLGSGKSTLVNYILNDQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVEL 224
T+ITGYLG+GKST VN+ILN QHGK+IAVILNEFG+EIGVERAMINEGD GALVEEWVEL
Sbjct: 32 TVITGYLGAGKSTFVNFILNSQHGKRIAVILNEFGEEIGVERAMINEGDNGALVEEWVEL 91
Query: 225 ANGCICCTVKHSFVQALEQLIQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 404
ANGCICCTVKHS VQALEQL+Q KERLDHILLETTGLANPAPLASVLWLDDQLES+V+LD
Sbjct: 92 ANGCICCTVKHSLVQALEQLVQMKERLDHILLETTGLANPAPLASVLWLDDQLESSVRLD 151
Query: 405 SIITVVDAKNLKHQLTQHRDSSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEE 584
SIITVVDAKNL+ QL H SSSFPE LQIAFAD++ILNK+DL+SPE+SG VLEE
Sbjct: 152 SIITVVDAKNLRFQLNSHHGSSSFPEAFLQIAFADVVILNKVDLVSPEESG----GVLEE 207
Query: 585 LEKDIYNINSLASVIHSVRCQVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSS 764
LEK+I+NINSLA++IHSVRCQVDLSKILDCRAY+A H HLE+LL ENQS+ ++LHDS+
Sbjct: 208 LEKEIHNINSLANIIHSVRCQVDLSKILDCRAYDATHATHLEALLEENQSLSSKDLHDSN 267
Query: 765 VRTLCISELEEVDLEKVRLWLEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYE 944
VRTLCISE VDL+KVRLWLEEILW+KK++MDVYRCKGVL V +SDQ+HT+QAVREIYE
Sbjct: 268 VRTLCISEPLPVDLDKVRLWLEEILWDKKYSMDVYRCKGVLRVLDSDQLHTLQAVREIYE 327
Query: 945 IVPVRRWKLEENRMDKIVFIGQNLQEDILRDSFKACI 1055
IVP R+WK EEN+M+KIVFIG NL ED L +SF+AC+
Sbjct: 328 IVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRACM 364
>ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-like [Vitis vinifera]
Length = 368
Score = 540 bits (1392), Expect = e-151
Identities = 266/337 (78%), Positives = 303/337 (89%)
Frame = +3
Query: 45 TIITGYLGSGKSTLVNYILNDQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVEL 224
T+ITGYLG+GKST VN+ILN QHGK+IAVILNEFG+EIGVERAMINEGD GALVEEWVEL
Sbjct: 32 TVITGYLGAGKSTFVNFILNSQHGKRIAVILNEFGEEIGVERAMINEGDNGALVEEWVEL 91
Query: 225 ANGCICCTVKHSFVQALEQLIQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 404
ANGCICCTVKHS VQALEQL+Q KERLDHILLETTGLANPAPLASVLWLDDQLES+V+LD
Sbjct: 92 ANGCICCTVKHSLVQALEQLVQMKERLDHILLETTGLANPAPLASVLWLDDQLESSVRLD 151
Query: 405 SIITVVDAKNLKHQLTQHRDSSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEE 584
SIITVVDAKNL+ QL H SSSFPE LQIAFAD++ILNK+DL+SPE+SG VLEE
Sbjct: 152 SIITVVDAKNLRFQLNSHHGSSSFPEAFLQIAFADVVILNKVDLVSPEESG----GVLEE 207
Query: 585 LEKDIYNINSLASVIHSVRCQVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSS 764
LEK+I+NINSLA++IHSVRCQVDLSKILDCRAY+A H HLE+LL ENQS+ ++LHDS+
Sbjct: 208 LEKEIHNINSLANIIHSVRCQVDLSKILDCRAYDATHATHLEALLEENQSLSSKDLHDSN 267
Query: 765 VRTLCISELEEVDLEKVRLWLEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYE 944
VRTLCISE VDL+KVRLWLEEILW+KK++MDVYRCKGVL V +SDQ+HT+QAVREIYE
Sbjct: 268 VRTLCISEPLPVDLDKVRLWLEEILWDKKYSMDVYRCKGVLRVLDSDQLHTLQAVREIYE 327
Query: 945 IVPVRRWKLEENRMDKIVFIGQNLQEDILRDSFKACI 1055
IVP R+WK EEN+M+KIVFIG NL ED L +SF+AC+
Sbjct: 328 IVPTRKWKNEENQMNKIVFIGHNLNEDALTNSFRACM 364
>ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|222852099|gb|EEE89646.1|
predicted protein [Populus trichocarpa]
Length = 375
Score = 521 bits (1341), Expect = e-145
Identities = 255/340 (75%), Positives = 304/340 (89%)
Frame = +3
Query: 45 TIITGYLGSGKSTLVNYILNDQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVEL 224
T+ITGYLGSGKSTLVN+ILN QHGK+IAVILNEFG+EIGVERAMINEG+ GALVEEWVEL
Sbjct: 40 TVITGYLGSGKSTLVNHILNTQHGKRIAVILNEFGEEIGVERAMINEGEDGALVEEWVEL 99
Query: 225 ANGCICCTVKHSFVQALEQLIQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 404
ANGC+CCTVKHS VQALEQL+Q KERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD
Sbjct: 100 ANGCVCCTVKHSLVQALEQLVQMKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 159
Query: 405 SIITVVDAKNLKHQLTQHRDSSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEE 584
SIITVVDAKNL +QL + ++SSSFPE +LQIAFAD+IILNK+DL+S SG + L+E
Sbjct: 160 SIITVVDAKNLHYQLNELQNSSSFPEASLQIAFADVIILNKVDLVSLGGSG----EALKE 215
Query: 585 LEKDIYNINSLASVIHSVRCQVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSS 764
LE +I+ INSLA++IHSVRCQVDLSKIL+CRAY++KH HLE LL E++S+ +LHDSS
Sbjct: 216 LENEIHKINSLANIIHSVRCQVDLSKILNCRAYDSKHFGHLEVLLEESKSLSTSDLHDSS 275
Query: 765 VRTLCISELEEVDLEKVRLWLEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYE 944
+RTLCI E ++VDL+KVRLWLEEILW+KK MDVYRCKGVL VRNSD++HT+QAVRE+Y+
Sbjct: 276 LRTLCICESQKVDLDKVRLWLEEILWDKKDGMDVYRCKGVLYVRNSDELHTLQAVRELYD 335
Query: 945 IVPVRRWKLEENRMDKIVFIGQNLQEDILRDSFKACILPT 1064
IVP R+W+ +EN+++KIVFIG NL+ED+L +SF+ CI+ T
Sbjct: 336 IVPARKWRSDENQINKIVFIGHNLKEDVLINSFRDCIVTT 375
>gb|AFK35605.1| unknown [Lotus japonicus]
Length = 390
Score = 514 bits (1323), Expect = e-143
Identities = 249/337 (73%), Positives = 297/337 (88%)
Frame = +3
Query: 45 TIITGYLGSGKSTLVNYILNDQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVEL 224
T+ITGYLG+GKSTLVN+ILN QHGK+IAVILNEFG+EIGVERAMINEGDGGA+VEEWVEL
Sbjct: 57 TLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGGAMVEEWVEL 116
Query: 225 ANGCICCTVKHSFVQALEQLIQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 404
ANGCICCTVKHS VQALEQL+QRKERLDHILLETTGLANPAPLASVLWLD+QLES VKLD
Sbjct: 117 ANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASVLWLDEQLESDVKLD 176
Query: 405 SIITVVDAKNLKHQLTQHRDSSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEE 584
SI+TVVDAKN++ Q+ QHR SSS+PE QIAFAD+IILNK+DL+S E SG L+E
Sbjct: 177 SIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAEGSG-----ALKE 231
Query: 585 LEKDIYNINSLASVIHSVRCQVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSS 764
LE++I+NINSL +IHSV+CQVDLSKIL+ AY+ HLE+LL E+ S+ + LHDS
Sbjct: 232 LEEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTARAPHLETLLEESCSLSTKKLHDSG 291
Query: 765 VRTLCISELEEVDLEKVRLWLEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYE 944
VRT+CISE + +D++K R+WLEEILWEKK++MDVYRCKGVL+V+NSDQ+HT+QAVRE+YE
Sbjct: 292 VRTICISEQKTIDIDKTRIWLEEILWEKKYDMDVYRCKGVLSVQNSDQLHTLQAVRELYE 351
Query: 945 IVPVRRWKLEENRMDKIVFIGQNLQEDILRDSFKACI 1055
IVP R+W+ EENRM+KIVFIG NL+ED+L SF+AC+
Sbjct: 352 IVPARKWEREENRMNKIVFIGHNLKEDVLIHSFRACV 388
>ref|XP_003614041.1| COBW domain-containing protein [Medicago truncatula]
gi|355515376|gb|AES96999.1| COBW domain-containing
protein [Medicago truncatula]
Length = 370
Score = 507 bits (1306), Expect = e-141
Identities = 248/339 (73%), Positives = 295/339 (87%), Gaps = 4/339 (1%)
Frame = +3
Query: 45 TIITGYLGSGKSTLVNYILNDQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVEL 224
T+ITGYLG+GKSTLVN+ILN QHGK+IAVILNEFG+EIGVERA+INEG+ GA+VEEWVEL
Sbjct: 33 TLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERALINEGESGAVVEEWVEL 92
Query: 225 ANGCICCTVKHSFVQALEQLIQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLD 404
ANGCICCTVKHS VQALEQL+QRKERLDHILLETTGLANPAPLAS+LWLD+QLES VKLD
Sbjct: 93 ANGCICCTVKHSLVQALEQLVQRKERLDHILLETTGLANPAPLASILWLDEQLESDVKLD 152
Query: 405 SIITVVDAKNLKHQLTQHRDSSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEE 584
SI+TVVDAKN++ QL +HR SSSFPE QIAFAD++ILNK+DL+S E SG LEE
Sbjct: 153 SIVTVVDAKNVRFQLKEHRGSSSFPEAYFQIAFADIVILNKVDLVSAEGSG-----ALEE 207
Query: 585 LEKDIYNINSLASVIHSVRCQVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSS 764
LE++I+NIN+L +IHSVRCQVDLSKIL+ AY+ H AHLE+LL E++S+ + LHDS
Sbjct: 208 LEEEIHNINTLVEIIHSVRCQVDLSKILNRHAYDTAHAAHLEALLEESRSLSTKKLHDSG 267
Query: 765 VRTLCISELEEVDLEKVRLWLEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYE 944
VRT+CI E +DL+K R+WLEEILWEKK++MDVYRCKGVLNV+NSD++HT+QAVRE+YE
Sbjct: 268 VRTICICETGTIDLDKTRIWLEEILWEKKYDMDVYRCKGVLNVQNSDELHTLQAVRELYE 327
Query: 945 IVPVRRWKLEENRMDKIVFIG----QNLQEDILRDSFKA 1049
IVP R+WK EENRM+KIVFIG NL+ED+L +S KA
Sbjct: 328 IVPARKWKKEENRMNKIVFIGNMMSHNLKEDVLINSLKA 366