BLASTX nr result
ID: Coptis25_contig00003829
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003829 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217... 110 1e-22 ref|XP_002512267.1| conserved hypothetical protein [Ricinus comm... 110 1e-22 gb|AFK33624.1| unknown [Lotus japonicus] 109 3e-22 ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA ... 108 4e-22 ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 >ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217561 [Cucumis sativus] gi|449485804|ref|XP_004157278.1| PREDICTED: uncharacterized protein LOC101225513 [Cucumis sativus] Length = 234 Score = 110 bits (275), Expect = 1e-22 Identities = 55/84 (65%), Positives = 69/84 (82%) Frame = +1 Query: 142 LNNSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDA 321 L+ SW+DKIKGV +G K ST + +S+SFTLL+FADE+ AR+ G+ K++IVGRSS+A Sbjct: 51 LHGSWMDKIKGVISGKKNST-EGTDISSESFTLLRFADELKNARRVGALKQYIVGRSSEA 109 Query: 322 TFATAFEKQEAIIRYLGGFDPSGE 393 TFA AFEKQEAIIRYLGGFD +GE Sbjct: 110 TFADAFEKQEAIIRYLGGFDSTGE 133 >ref|XP_002512267.1| conserved hypothetical protein [Ricinus communis] gi|223548228|gb|EEF49719.1| conserved hypothetical protein [Ricinus communis] Length = 224 Score = 110 bits (275), Expect = 1e-22 Identities = 55/81 (67%), Positives = 64/81 (79%) Frame = +1 Query: 151 SWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDATFA 330 SW+D IKGVFTG K DS+ QSFTL++FADE+ AR+ GSFKKFIVGRSS+ATF+ Sbjct: 46 SWMDSIKGVFTGQK---GDSKDTAVQSFTLIRFADELKNARRVGSFKKFIVGRSSEATFS 102 Query: 331 TAFEKQEAIIRYLGGFDPSGE 393 AFEK E IIRYL GFDP+GE Sbjct: 103 DAFEKMERIIRYLSGFDPTGE 123 >gb|AFK33624.1| unknown [Lotus japonicus] Length = 213 Score = 109 bits (272), Expect = 3e-22 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 2/88 (2%) Frame = +1 Query: 136 PHLNNSWVDKIKGVFTGPKPSTNDSQQPNS--QSFTLLKFADEMVTARKAGSFKKFIVGR 309 P L NSWVDK+K VFTG K +T ++ P+S SFTLL FADEM ARK G+FK ++VGR Sbjct: 29 PQLQNSWVDKVKTVFTGQKTTTT-TENPSSTTDSFTLLHFADEMKKARKIGAFKDYVVGR 87 Query: 310 SSDATFATAFEKQEAIIRYLGGFDPSGE 393 SS+ TF TAFEK EAIIR+LG DP+GE Sbjct: 88 SSEVTFTTAFEKNEAIIRFLGVLDPTGE 115 >ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA 1-like [Vitis vinifera] Length = 227 Score = 108 bits (270), Expect = 4e-22 Identities = 54/85 (63%), Positives = 68/85 (80%) Frame = +1 Query: 139 HLNNSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSD 318 HL+ SW+DKIKGV TG K + + Q ++ FTLL+FA+E+ AR AG+FK+F+VGRSS+ Sbjct: 47 HLDASWMDKIKGVLTGKKAAPDG--QITTEEFTLLRFANELKAARAAGTFKRFVVGRSSE 104 Query: 319 ATFATAFEKQEAIIRYLGGFDPSGE 393 ATFA AF KQEAIIRYLG FDPSG+ Sbjct: 105 ATFADAFGKQEAIIRYLGRFDPSGD 129 >ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|222857423|gb|EEE94970.1| predicted protein [Populus trichocarpa] Length = 222 Score = 107 bits (266), Expect = 1e-21 Identities = 53/82 (64%), Positives = 64/82 (78%) Frame = +1 Query: 148 NSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDATF 327 +SW+D IKGVFTG K T D+ + SFTLL FAD M AR+ GS K+F+VGRSS+ATF Sbjct: 47 SSWMDTIKGVFTGKKAETEDTPE----SFTLLSFADGMKNARRVGSLKQFVVGRSSEATF 102 Query: 328 ATAFEKQEAIIRYLGGFDPSGE 393 ++AFEKQEAIIRYLG DP+GE Sbjct: 103 SSAFEKQEAIIRYLGALDPTGE 124