BLASTX nr result

ID: Coptis25_contig00003829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003829
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217...   110   1e-22
ref|XP_002512267.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
gb|AFK33624.1| unknown [Lotus japonicus]                              109   3e-22
ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA ...   108   4e-22
ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_004135658.1| PREDICTED: uncharacterized protein LOC101217561 [Cucumis sativus]
           gi|449485804|ref|XP_004157278.1| PREDICTED:
           uncharacterized protein LOC101225513 [Cucumis sativus]
          Length = 234

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/84 (65%), Positives = 69/84 (82%)
 Frame = +1

Query: 142 LNNSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDA 321
           L+ SW+DKIKGV +G K ST +    +S+SFTLL+FADE+  AR+ G+ K++IVGRSS+A
Sbjct: 51  LHGSWMDKIKGVISGKKNST-EGTDISSESFTLLRFADELKNARRVGALKQYIVGRSSEA 109

Query: 322 TFATAFEKQEAIIRYLGGFDPSGE 393
           TFA AFEKQEAIIRYLGGFD +GE
Sbjct: 110 TFADAFEKQEAIIRYLGGFDSTGE 133


>ref|XP_002512267.1| conserved hypothetical protein [Ricinus communis]
           gi|223548228|gb|EEF49719.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/81 (67%), Positives = 64/81 (79%)
 Frame = +1

Query: 151 SWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDATFA 330
           SW+D IKGVFTG K    DS+    QSFTL++FADE+  AR+ GSFKKFIVGRSS+ATF+
Sbjct: 46  SWMDSIKGVFTGQK---GDSKDTAVQSFTLIRFADELKNARRVGSFKKFIVGRSSEATFS 102

Query: 331 TAFEKQEAIIRYLGGFDPSGE 393
            AFEK E IIRYL GFDP+GE
Sbjct: 103 DAFEKMERIIRYLSGFDPTGE 123


>gb|AFK33624.1| unknown [Lotus japonicus]
          Length = 213

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
 Frame = +1

Query: 136 PHLNNSWVDKIKGVFTGPKPSTNDSQQPNS--QSFTLLKFADEMVTARKAGSFKKFIVGR 309
           P L NSWVDK+K VFTG K +T  ++ P+S   SFTLL FADEM  ARK G+FK ++VGR
Sbjct: 29  PQLQNSWVDKVKTVFTGQKTTTT-TENPSSTTDSFTLLHFADEMKKARKIGAFKDYVVGR 87

Query: 310 SSDATFATAFEKQEAIIRYLGGFDPSGE 393
           SS+ TF TAFEK EAIIR+LG  DP+GE
Sbjct: 88  SSEVTFTTAFEKNEAIIRFLGVLDPTGE 115


>ref|XP_002274439.1| PREDICTED: protein translocase subunit SecA 1-like [Vitis vinifera]
          Length = 227

 Score =  108 bits (270), Expect = 4e-22
 Identities = 54/85 (63%), Positives = 68/85 (80%)
 Frame = +1

Query: 139 HLNNSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSD 318
           HL+ SW+DKIKGV TG K + +   Q  ++ FTLL+FA+E+  AR AG+FK+F+VGRSS+
Sbjct: 47  HLDASWMDKIKGVLTGKKAAPDG--QITTEEFTLLRFANELKAARAAGTFKRFVVGRSSE 104

Query: 319 ATFATAFEKQEAIIRYLGGFDPSGE 393
           ATFA AF KQEAIIRYLG FDPSG+
Sbjct: 105 ATFADAFGKQEAIIRYLGRFDPSGD 129


>ref|XP_002319047.1| predicted protein [Populus trichocarpa] gi|222857423|gb|EEE94970.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = +1

Query: 148 NSWVDKIKGVFTGPKPSTNDSQQPNSQSFTLLKFADEMVTARKAGSFKKFIVGRSSDATF 327
           +SW+D IKGVFTG K  T D+ +    SFTLL FAD M  AR+ GS K+F+VGRSS+ATF
Sbjct: 47  SSWMDTIKGVFTGKKAETEDTPE----SFTLLSFADGMKNARRVGSLKQFVVGRSSEATF 102

Query: 328 ATAFEKQEAIIRYLGGFDPSGE 393
           ++AFEKQEAIIRYLG  DP+GE
Sbjct: 103 SSAFEKQEAIIRYLGALDPTGE 124


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