BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003828
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   365   2e-99
ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arab...   360   1e-97
ref|NP_567055.1| glycoside hydrolase family 28 protein / polygal...   357   9e-97
emb|CAB41176.1| putative protein [Arabidopsis thaliana]               357   9e-97
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   345   3e-93

>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  365 bits (938), Expect = 2e-99
 Identities = 164/200 (82%), Positives = 184/200 (92%)
 Frame = -3

Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423
           G GV+DGQGLKFV++ +E+KNVMVSWNS+GAC GDECRPRLVGF+ C NVKV NV L++P
Sbjct: 109 GGGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSEP 168

Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243
           AYWCLHIV+C NT I  VSIYGDFN+PNNDGIDIEDSNNT+ITRC IDTGDDAICPKTYT
Sbjct: 169 AYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDSNNTLITRCHIDTGDDAICPKTYT 228

Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63
           GP+YNLTA DCWIRTKSSAIKLGSA+W++FKGLVFDNITIVDSHRGL  Q+RDGGN +D+
Sbjct: 229 GPIYNLTATDCWIRTKSSAIKLGSASWFEFKGLVFDNITIVDSHRGLGLQIRDGGNVSDI 288

Query: 62  TFSNINVSTRYYDPSWWGRA 3
           TFSNIN+STRYYDPSWWGRA
Sbjct: 289 TFSNINISTRYYDPSWWGRA 308


>ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
           lyrata] gi|297324010|gb|EFH54431.1| hypothetical protein
           ARALYDRAFT_324272 [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score =  360 bits (923), Expect = 1e-97
 Identities = 162/200 (81%), Positives = 179/200 (89%)
 Frame = -3

Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423
           G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++ RNV++ N+ L +P
Sbjct: 134 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSRNVEIWNITLREP 193

Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243
           AYWCLHIVRC+NT +  VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT
Sbjct: 194 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 253

Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63
           GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL  Q+RDGGN +D+
Sbjct: 254 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDI 313

Query: 62  TFSNINVSTRYYDPSWWGRA 3
           TFSNIN+STRYYDPSWWGRA
Sbjct: 314 TFSNINISTRYYDPSWWGRA 333


>ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase
           (pectinase) family protein [Arabidopsis thaliana]
           gi|332646180|gb|AEE79701.1| glycoside hydrolase family
           28 protein / polygalacturonase (pectinase) family
           protein [Arabidopsis thaliana]
          Length = 490

 Score =  357 bits (916), Expect = 9e-97
 Identities = 162/200 (81%), Positives = 178/200 (89%)
 Frame = -3

Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423
           G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++  NV++ N+ L +P
Sbjct: 135 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREP 194

Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243
           AYWCLHIVRC+NT +  VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT
Sbjct: 195 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 254

Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63
           GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL  Q+RDGGN +DV
Sbjct: 255 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDV 314

Query: 62  TFSNINVSTRYYDPSWWGRA 3
           TFSNIN+STRYYDPSWWGRA
Sbjct: 315 TFSNINISTRYYDPSWWGRA 334


>emb|CAB41176.1| putative protein [Arabidopsis thaliana]
          Length = 614

 Score =  357 bits (916), Expect = 9e-97
 Identities = 162/200 (81%), Positives = 178/200 (89%)
 Frame = -3

Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423
           G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++  NV++ N+ L +P
Sbjct: 135 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREP 194

Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243
           AYWCLHIVRC+NT +  VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT
Sbjct: 195 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 254

Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63
           GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL  Q+RDGGN +DV
Sbjct: 255 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDV 314

Query: 62  TFSNINVSTRYYDPSWWGRA 3
           TFSNIN+STRYYDPSWWGRA
Sbjct: 315 TFSNINISTRYYDPSWWGRA 334


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
           sativus]
          Length = 463

 Score =  345 bits (885), Expect = 3e-93
 Identities = 152/200 (76%), Positives = 180/200 (90%)
 Frame = -3

Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423
           G G +DGQGLKFVEK D++KNVMVSWN +GACYGDECRP LVGF+    V+V NV+  QP
Sbjct: 127 GGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQP 186

Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243
           A+WCLH+VRC+NT+I+ VSIYGDF+TPNNDGIDIEDSNNT+ITRC IDTGDDAICPK+  
Sbjct: 187 AHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSN 246

Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63
           GP++NLTA +CWIRTKSSAIKLGSA+W++F  ++FDN+TIVDSHRGLAFQLRDGG+A D+
Sbjct: 247 GPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGSANDI 306

Query: 62  TFSNINVSTRYYDPSWWGRA 3
           TFSNIN++TRYYDPSWWGRA
Sbjct: 307 TFSNINITTRYYDPSWWGRA 326