BLASTX nr result
ID: Coptis25_contig00003828
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003828 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2... 365 2e-99 ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arab... 360 1e-97 ref|NP_567055.1| glycoside hydrolase family 28 protein / polygal... 357 9e-97 emb|CAB41176.1| putative protein [Arabidopsis thaliana] 357 9e-97 ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas... 345 3e-93 >ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1| predicted protein [Populus trichocarpa] Length = 445 Score = 365 bits (938), Expect = 2e-99 Identities = 164/200 (82%), Positives = 184/200 (92%) Frame = -3 Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423 G GV+DGQGLKFV++ +E+KNVMVSWNS+GAC GDECRPRLVGF+ C NVKV NV L++P Sbjct: 109 GGGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSEP 168 Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243 AYWCLHIV+C NT I VSIYGDFN+PNNDGIDIEDSNNT+ITRC IDTGDDAICPKTYT Sbjct: 169 AYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDSNNTLITRCHIDTGDDAICPKTYT 228 Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63 GP+YNLTA DCWIRTKSSAIKLGSA+W++FKGLVFDNITIVDSHRGL Q+RDGGN +D+ Sbjct: 229 GPIYNLTATDCWIRTKSSAIKLGSASWFEFKGLVFDNITIVDSHRGLGLQIRDGGNVSDI 288 Query: 62 TFSNINVSTRYYDPSWWGRA 3 TFSNIN+STRYYDPSWWGRA Sbjct: 289 TFSNINISTRYYDPSWWGRA 308 >ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp. lyrata] gi|297324010|gb|EFH54431.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp. lyrata] Length = 589 Score = 360 bits (923), Expect = 1e-97 Identities = 162/200 (81%), Positives = 179/200 (89%) Frame = -3 Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423 G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++ RNV++ N+ L +P Sbjct: 134 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSRNVEIWNITLREP 193 Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243 AYWCLHIVRC+NT + VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT Sbjct: 194 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 253 Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63 GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL Q+RDGGN +D+ Sbjct: 254 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDI 313 Query: 62 TFSNINVSTRYYDPSWWGRA 3 TFSNIN+STRYYDPSWWGRA Sbjct: 314 TFSNINISTRYYDPSWWGRA 333 >ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gi|332646180|gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] Length = 490 Score = 357 bits (916), Expect = 9e-97 Identities = 162/200 (81%), Positives = 178/200 (89%) Frame = -3 Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423 G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++ NV++ N+ L +P Sbjct: 135 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREP 194 Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243 AYWCLHIVRC+NT + VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT Sbjct: 195 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 254 Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63 GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL Q+RDGGN +DV Sbjct: 255 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDV 314 Query: 62 TFSNINVSTRYYDPSWWGRA 3 TFSNIN+STRYYDPSWWGRA Sbjct: 315 TFSNINISTRYYDPSWWGRA 334 >emb|CAB41176.1| putative protein [Arabidopsis thaliana] Length = 614 Score = 357 bits (916), Expect = 9e-97 Identities = 162/200 (81%), Positives = 178/200 (89%) Frame = -3 Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423 G G IDGQG KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++ NV++ N+ L +P Sbjct: 135 GGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVEIWNITLREP 194 Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243 AYWCLHIVRC+NT + VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAICPKTYT Sbjct: 195 AYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAICPKTYT 254 Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63 GPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL Q+RDGGN +DV Sbjct: 255 GPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDGGNVSDV 314 Query: 62 TFSNINVSTRYYDPSWWGRA 3 TFSNIN+STRYYDPSWWGRA Sbjct: 315 TFSNINISTRYYDPSWWGRA 334 >ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus] Length = 463 Score = 345 bits (885), Expect = 3e-93 Identities = 152/200 (76%), Positives = 180/200 (90%) Frame = -3 Query: 602 GDGVIDGQGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQP 423 G G +DGQGLKFVEK D++KNVMVSWN +GACYGDECRP LVGF+ V+V NV+ QP Sbjct: 127 GGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQP 186 Query: 422 AYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYT 243 A+WCLH+VRC+NT+I+ VSIYGDF+TPNNDGIDIEDSNNT+ITRC IDTGDDAICPK+ Sbjct: 187 AHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSN 246 Query: 242 GPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDV 63 GP++NLTA +CWIRTKSSAIKLGSA+W++F ++FDN+TIVDSHRGLAFQLRDGG+A D+ Sbjct: 247 GPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGSANDI 306 Query: 62 TFSNINVSTRYYDPSWWGRA 3 TFSNIN++TRYYDPSWWGRA Sbjct: 307 TFSNINITTRYYDPSWWGRA 326