BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003819
         (3895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU25941.1| cytochrome b [Vitis vinifera]                          781   0.0  
ref|YP_004927538.1| cob (mitochondrion) [Brassica carinata] gi|3...   778   0.0  
ref|YP_717171.1| apocytochrome b [Brassica napus] gi|37591119|db...   777   0.0  
ref|XP_002333252.1| predicted protein [Populus trichocarpa] gi|2...   777   0.0  
emb|CAA47966.1| cytochrome b [Arabidopsis thaliana]                   776   0.0  

>gb|AAU25941.1| cytochrome b [Vitis vinifera]
          Length = 393

 Score =  781 bits (2018), Expect = 0.0
 Identities = 377/393 (95%), Positives = 381/393 (96%)
 Frame = -2

Query: 1794 ITIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 1615
            +TIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY
Sbjct: 1    MTIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 60

Query: 1614 TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRELVW 1435
            TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRE VW
Sbjct: 61   TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVW 120

Query: 1434 CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 1255
            CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA
Sbjct: 121  CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 180

Query: 1254 TLNRFFSLHYLLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 1075
            TLNRFFSLHYLLP ILVGASLLHLAALHQYGSNNPLGVHSEMDKI+FYPYFYVKDLVGWV
Sbjct: 181  TLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKISFYPYFYVKDLVGWV 240

Query: 1074 ASAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKSGGVAA 895
            A AIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPI+AILRSIPDKSGGVAA
Sbjct: 241  AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKSGGVAA 300

Query: 894  IALVFICLLALPFFKSMYVRSSSFRPIHQGIFWXXXXXXXXLGWIGCQPVEAPFVTIGQI 715
            IALVFICLLALPFFKSMYVRSSSFRPI+QGIFW        LGWIGCQPVEAPFVTIGQI
Sbjct: 301  IALVFICLLALPFFKSMYVRSSSFRPIYQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQI 360

Query: 714  SPFVFFLFFAITPILGRVGRGIPNSYTDETDHT 616
            S FVFFLFFAITPILGRVGRGIPNSYTDETDHT
Sbjct: 361  SSFVFFLFFAITPILGRVGRGIPNSYTDETDHT 393


>ref|YP_004927538.1| cob (mitochondrion) [Brassica carinata] gi|335354999|gb|AEH43553.1|
            cob [Brassica carinata]
          Length = 393

 Score =  778 bits (2010), Expect = 0.0
 Identities = 373/393 (94%), Positives = 380/393 (96%)
 Frame = -2

Query: 1794 ITIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 1615
            +TIRNQRFSLLKQPISSTLNQHL+DYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY
Sbjct: 1    MTIRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 60

Query: 1614 TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRELVW 1435
            TPHVDLAFNSVEH+MRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLY+ASYSSPRE VW
Sbjct: 61   TPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYHASYSSPREFVW 120

Query: 1434 CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 1255
            CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA
Sbjct: 121  CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 180

Query: 1254 TLNRFFSLHYLLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 1075
            TLNRFFSLH+LLP ILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV
Sbjct: 181  TLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 240

Query: 1074 ASAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKSGGVAA 895
            A AIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDK+GGVAA
Sbjct: 241  AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAA 300

Query: 894  IALVFICLLALPFFKSMYVRSSSFRPIHQGIFWXXXXXXXXLGWIGCQPVEAPFVTIGQI 715
            IA VFICLLALPFFKSMYVRSSSFRPIHQG+FW        LGWIGCQPVEAPFVTIGQI
Sbjct: 301  IAPVFICLLALPFFKSMYVRSSSFRPIHQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQI 360

Query: 714  SPFVFFLFFAITPILGRVGRGIPNSYTDETDHT 616
            SP VFFLFFAITPILGRVGRGIPNSYTDETDHT
Sbjct: 361  SPLVFFLFFAITPILGRVGRGIPNSYTDETDHT 393


>ref|YP_717171.1| apocytochrome b [Brassica napus] gi|37591119|dbj|BAC98921.1|
            apocytochrome b [Brassica napus]
          Length = 393

 Score =  777 bits (2007), Expect = 0.0
 Identities = 373/393 (94%), Positives = 380/393 (96%)
 Frame = -2

Query: 1794 ITIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 1615
            +TIRNQRFSLLKQPISSTLNQHL+DYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY
Sbjct: 1    MTIRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 60

Query: 1614 TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRELVW 1435
            TPHVDLAFNSVEH+MRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRE VW
Sbjct: 61   TPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVW 120

Query: 1434 CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 1255
            CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA
Sbjct: 121  CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 180

Query: 1254 TLNRFFSLHYLLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 1075
            TLNRFFSLHYLLP ILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV
Sbjct: 181  TLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 240

Query: 1074 ASAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKSGGVAA 895
            A AIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPI+AILRSIPDK+GGVAA
Sbjct: 241  AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKAGGVAA 300

Query: 894  IALVFICLLALPFFKSMYVRSSSFRPIHQGIFWXXXXXXXXLGWIGCQPVEAPFVTIGQI 715
            IALVFICLLALPFFKSMYVRSSSFRPI+QG+FW        LGWIGCQPVEAPFVTIGQI
Sbjct: 301  IALVFICLLALPFFKSMYVRSSSFRPIYQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQI 360

Query: 714  SPFVFFLFFAITPILGRVGRGIPNSYTDETDHT 616
            S  VFFLFFAITPILGRVGRGIPNSYTDETDHT
Sbjct: 361  SSLVFFLFFAITPILGRVGRGIPNSYTDETDHT 393


>ref|XP_002333252.1| predicted protein [Populus trichocarpa]
            gi|224110348|ref|XP_002333107.1| predicted protein
            [Populus trichocarpa] gi|224142794|ref|XP_002335964.1|
            predicted protein [Populus trichocarpa]
            gi|222834890|gb|EEE73339.1| predicted protein [Populus
            trichocarpa] gi|222835781|gb|EEE74216.1| predicted
            protein [Populus trichocarpa] gi|222836401|gb|EEE74808.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  777 bits (2006), Expect = 0.0
 Identities = 374/393 (95%), Positives = 379/393 (96%)
 Frame = -2

Query: 1794 ITIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 1615
            +TI NQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY
Sbjct: 1    MTISNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 60

Query: 1614 TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRELVW 1435
            TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRE VW
Sbjct: 61   TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPREFVW 120

Query: 1434 CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 1255
            CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA
Sbjct: 121  CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 180

Query: 1254 TLNRFFSLHYLLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 1075
            TLNRFFSLHYLLP ILVGASLLHLAALHQYGSNNPLGVHSEMDKI+FYPYFYVKDLVGWV
Sbjct: 181  TLNRFFSLHYLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKISFYPYFYVKDLVGWV 240

Query: 1074 ASAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKSGGVAA 895
            A AIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPI+AILRSIPDKSGGVAA
Sbjct: 241  AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIYAILRSIPDKSGGVAA 300

Query: 894  IALVFICLLALPFFKSMYVRSSSFRPIHQGIFWXXXXXXXXLGWIGCQPVEAPFVTIGQI 715
            IA VFICLLALPF KSMYVRSSSFRPIHQGIFW        LGWIGCQPVEAPFVTIGQI
Sbjct: 301  IAPVFICLLALPFLKSMYVRSSSFRPIHQGIFWLLLADCLLLGWIGCQPVEAPFVTIGQI 360

Query: 714  SPFVFFLFFAITPILGRVGRGIPNSYTDETDHT 616
            SPFVFFLFFAITPILGRVG+GIPNSYTDET+HT
Sbjct: 361  SPFVFFLFFAITPILGRVGKGIPNSYTDETEHT 393


>emb|CAA47966.1| cytochrome b [Arabidopsis thaliana]
          Length = 393

 Score =  776 bits (2004), Expect = 0.0
 Identities = 372/393 (94%), Positives = 379/393 (96%)
 Frame = -2

Query: 1794 ITIRNQRFSLLKQPISSTLNQHLIDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 1615
            +TIRNQRFSLLKQPISSTLNQHL+DYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY
Sbjct: 1    MTIRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGSLAGICLVIQIVTGVFLAMHY 60

Query: 1614 TPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFFIVVYLHIFRGLYYASYSSPRELVW 1435
            TPHVDLAFNSVEH+MRDVEGGWLLRYMHANGASMF IVVYLHIFRGLY+ASYSSPRE VW
Sbjct: 61   TPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSPREFVW 120

Query: 1434 CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 1255
            CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA
Sbjct: 121  CLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNA 180

Query: 1254 TLNRFFSLHYLLPLILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 1075
            TLNRFFSLH+LLP ILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV
Sbjct: 181  TLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWV 240

Query: 1074 ASAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKSGGVAA 895
            A AIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDK+GGVAA
Sbjct: 241  AFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAA 300

Query: 894  IALVFICLLALPFFKSMYVRSSSFRPIHQGIFWXXXXXXXXLGWIGCQPVEAPFVTIGQI 715
            IA VFICLLALPFFKSMYVRSSSFRPIHQG+FW        LGWIGCQPVEAPFVTIGQI
Sbjct: 301  IAPVFICLLALPFFKSMYVRSSSFRPIHQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQI 360

Query: 714  SPFVFFLFFAITPILGRVGRGIPNSYTDETDHT 616
            SP VFFLFFAITPILGRVGRGIPNSYTDETDHT
Sbjct: 361  SPLVFFLFFAITPILGRVGRGIPNSYTDETDHT 393