BLASTX nr result

ID: Coptis25_contig00003804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003804
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512639.1| conserved hypothetical protein [Ricinus comm...   234   1e-59
ref|XP_002263687.1| PREDICTED: uncharacterized protein LOC100242...   234   2e-59
emb|CBI38178.3| unnamed protein product [Vitis vinifera]              225   9e-57
ref|XP_002299338.1| predicted protein [Populus trichocarpa] gi|2...   221   9e-56
ref|XP_002303762.1| predicted protein [Populus trichocarpa] gi|1...   221   2e-55

>ref|XP_002512639.1| conserved hypothetical protein [Ricinus communis]
           gi|223548600|gb|EEF50091.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score =  234 bits (597), Expect = 1e-59
 Identities = 99/137 (72%), Positives = 119/137 (86%)
 Frame = -1

Query: 627 KKEEPAVGIPYQQQQGYYVGHNLYQAGMVPPNAIYDDPKGIPLQQTIFRDTPAPFNCVYC 448
           +K+EPA+G+PY      YVG N YQAG +PPNA++ DPKGIP+QQT++RDTPAPFNCV+C
Sbjct: 3   QKDEPAIGVPY------YVGQNPYQAGAIPPNAVFGDPKGIPIQQTMYRDTPAPFNCVFC 56

Query: 447 GSSGVTTIKSKPSLAAAVACLVPFGLGICFLCPSGDCLWHKYHYCPNCKEKVADFEKSDA 268
           G+SG+T ++SKPSLAA V C++PF LG CFLCPS DCLWHKYHYCPNCKEKVADFEKSD 
Sbjct: 57  GNSGLTLVRSKPSLAAVVGCMMPFMLGFCFLCPSMDCLWHKYHYCPNCKEKVADFEKSDP 116

Query: 267 CMVMDPPQWSQTSFAVP 217
           C+VMDPPQW+Q SFA+P
Sbjct: 117 CLVMDPPQWTQQSFALP 133


>ref|XP_002263687.1| PREDICTED: uncharacterized protein LOC100242123 [Vitis vinifera]
           gi|147866224|emb|CAN79932.1| hypothetical protein
           VITISV_005113 [Vitis vinifera]
          Length = 141

 Score =  234 bits (596), Expect = 2e-59
 Identities = 103/137 (75%), Positives = 117/137 (85%)
 Frame = -1

Query: 627 KKEEPAVGIPYQQQQGYYVGHNLYQAGMVPPNAIYDDPKGIPLQQTIFRDTPAPFNCVYC 448
           K+EEP +GIPY     Y+   N YQAG++PPNA   DPKG+P+QQTIFRDTPAPFNCVYC
Sbjct: 4   KEEEPVMGIPYPAV--YHPNQNPYQAGVIPPNAFVGDPKGVPIQQTIFRDTPAPFNCVYC 61

Query: 447 GSSGVTTIKSKPSLAAAVACLVPFGLGICFLCPSGDCLWHKYHYCPNCKEKVADFEKSDA 268
           GSSGVTT+KSKPSLAA V C++P  LGICFLCPS DCLWHKYHYCP+CKEKVADFEKSD 
Sbjct: 62  GSSGVTTVKSKPSLAAVVGCMMPMMLGICFLCPSMDCLWHKYHYCPSCKEKVADFEKSDP 121

Query: 267 CMVMDPPQWSQTSFAVP 217
           C+VMDPPQW+Q SFA+P
Sbjct: 122 CVVMDPPQWTQQSFALP 138


>emb|CBI38178.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  225 bits (573), Expect = 9e-57
 Identities = 99/131 (75%), Positives = 112/131 (85%)
 Frame = -1

Query: 609 VGIPYQQQQGYYVGHNLYQAGMVPPNAIYDDPKGIPLQQTIFRDTPAPFNCVYCGSSGVT 430
           +GIPY     Y+   N YQAG++PPNA   DPKG+P+QQTIFRDTPAPFNCVYCGSSGVT
Sbjct: 1   MGIPYPAV--YHPNQNPYQAGVIPPNAFVGDPKGVPIQQTIFRDTPAPFNCVYCGSSGVT 58

Query: 429 TIKSKPSLAAAVACLVPFGLGICFLCPSGDCLWHKYHYCPNCKEKVADFEKSDACMVMDP 250
           T+KSKPSLAA V C++P  LGICFLCPS DCLWHKYHYCP+CKEKVADFEKSD C+VMDP
Sbjct: 59  TVKSKPSLAAVVGCMMPMMLGICFLCPSMDCLWHKYHYCPSCKEKVADFEKSDPCVVMDP 118

Query: 249 PQWSQTSFAVP 217
           PQW+Q SFA+P
Sbjct: 119 PQWTQQSFALP 129


>ref|XP_002299338.1| predicted protein [Populus trichocarpa] gi|222846596|gb|EEE84143.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  221 bits (564), Expect = 9e-56
 Identities = 94/137 (68%), Positives = 113/137 (82%)
 Frame = -1

Query: 627 KKEEPAVGIPYQQQQGYYVGHNLYQAGMVPPNAIYDDPKGIPLQQTIFRDTPAPFNCVYC 448
           +K+EP +G+PY      Y G N YQAG +PPNAI  DP+GIP+QQT++RDTPAPFNCVYC
Sbjct: 3   QKDEPVIGVPY------YAGQNPYQAGAIPPNAIVGDPRGIPIQQTMYRDTPAPFNCVYC 56

Query: 447 GSSGVTTIKSKPSLAAAVACLVPFGLGICFLCPSGDCLWHKYHYCPNCKEKVADFEKSDA 268
           G+SGVT ++SKPSLAA V C++P  +G CFLCPS DCLWHK+HYCP+CKEKVADFEKSD 
Sbjct: 57  GNSGVTVVRSKPSLAAVVGCMMPLMVGFCFLCPSMDCLWHKHHYCPSCKEKVADFEKSDP 116

Query: 267 CMVMDPPQWSQTSFAVP 217
           C VMDPP W+Q SFA+P
Sbjct: 117 CAVMDPPHWTQESFALP 133


>ref|XP_002303762.1| predicted protein [Populus trichocarpa] gi|118482551|gb|ABK93196.1|
           unknown [Populus trichocarpa]
           gi|222841194|gb|EEE78741.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score =  221 bits (562), Expect = 2e-55
 Identities = 95/137 (69%), Positives = 113/137 (82%)
 Frame = -1

Query: 627 KKEEPAVGIPYQQQQGYYVGHNLYQAGMVPPNAIYDDPKGIPLQQTIFRDTPAPFNCVYC 448
           ++++P VG+PY      Y G N YQAG +PPNAI  DPKGIP+QQT++RDTPAPF+CVYC
Sbjct: 3   QQDQPVVGVPY------YAGQNPYQAGAIPPNAIVGDPKGIPIQQTMYRDTPAPFSCVYC 56

Query: 447 GSSGVTTIKSKPSLAAAVACLVPFGLGICFLCPSGDCLWHKYHYCPNCKEKVADFEKSDA 268
           G+SGVT ++SKPSLAA V C++P  LG CFLCPS DCLWHKYHYCP+CKEKVADFEKSD 
Sbjct: 57  GNSGVTFVRSKPSLAAVVGCMMPLMLGFCFLCPSMDCLWHKYHYCPSCKEKVADFEKSDP 116

Query: 267 CMVMDPPQWSQTSFAVP 217
           C VMDPP W+Q SFA+P
Sbjct: 117 CAVMDPPHWTQESFALP 133


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