BLASTX nr result

ID: Coptis25_contig00003794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003794
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277196.2| PREDICTED: uncharacterized protein LOC100243...   128   5e-28
emb|CBI27736.3| unnamed protein product [Vitis vinifera]              128   5e-28
ref|XP_002516180.1| electron transporter, putative [Ricinus comm...   126   2e-27
emb|CAN66774.1| hypothetical protein VITISV_006776 [Vitis vinifera]   113   2e-23
ref|XP_002308502.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23

>ref|XP_002277196.2| PREDICTED: uncharacterized protein LOC100243916 [Vitis vinifera]
          Length = 580

 Score =  128 bits (321), Expect = 5e-28
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 5/149 (3%)
 Frame = -2

Query: 493 NTIQRYLRK-GKSWKYPSPIPVSLNASPATCSSGPLLLDDEDPKASDGKQRSRKTRSL-- 323
           ++I RYLRK G+   + S    S +   +  SSG   L+D  P   +  Q SR    L  
Sbjct: 30  SSIHRYLRKNGRGGSHHS---FSSSGDGSGTSSG---LEDRKPWERESSQESRGRTCLYK 83

Query: 322 --LEQDITALQKQLEEEIDLHLALASAIDHSNATFSNSIGQLPDKAQELVTNIALLEITV 149
             LEQD+  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IA+LEITV
Sbjct: 84  FQLEQDVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAVLEITV 142

Query: 148 SKLEEELVALHFQLSQERNERRLAEYRLR 62
           SKLE++LVAL++QL+QERNERRL+EY LR
Sbjct: 143 SKLEQKLVALNYQLTQERNERRLSEYHLR 171


>emb|CBI27736.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  128 bits (321), Expect = 5e-28
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 5/149 (3%)
 Frame = -2

Query: 493 NTIQRYLRK-GKSWKYPSPIPVSLNASPATCSSGPLLLDDEDPKASDGKQRSRKTRSL-- 323
           ++I RYLRK G+   + S    S +   +  SSG   L+D  P   +  Q SR    L  
Sbjct: 30  SSIHRYLRKNGRGGSHHS---FSSSGDGSGTSSG---LEDRKPWERESSQESRGRTCLYK 83

Query: 322 --LEQDITALQKQLEEEIDLHLALASAIDHSNATFSNSIGQLPDKAQELVTNIALLEITV 149
             LEQD+  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IA+LEITV
Sbjct: 84  FQLEQDVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAVLEITV 142

Query: 148 SKLEEELVALHFQLSQERNERRLAEYRLR 62
           SKLE++LVAL++QL+QERNERRL+EY LR
Sbjct: 143 SKLEQKLVALNYQLTQERNERRLSEYHLR 171


>ref|XP_002516180.1| electron transporter, putative [Ricinus communis]
           gi|223544666|gb|EEF46182.1| electron transporter,
           putative [Ricinus communis]
          Length = 589

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/151 (49%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
 Frame = -2

Query: 496 GNTIQRYLRKGKSWKYPSPIPVSLNASPATCSSGPLLLDDEDPKASDGKQRSRKTRSL-- 323
           G++I +YL     WK    +    + S ++    P + D ED K  D +    K  ++  
Sbjct: 42  GSSIHKYL-----WKTGRIVS---SRSISSADGSPSISDLEDTKPLDKRSGQLKGGNMSL 93

Query: 322 ----LEQDITALQKQLEEEIDLHLALASAIDHSNATFSNSIGQLPDKAQELVTNIALLEI 155
               LE+D+  LQ+QL+EEIDL LALASA++HSN++FS+S  QLPDKAQEL+ +IA+LEI
Sbjct: 94  YRYQLEEDVKKLQQQLQEEIDLRLALASAVEHSNSSFSSSPYQLPDKAQELLDSIAILEI 153

Query: 154 TVSKLEEELVALHFQLSQERNERRLAEYRLR 62
            VSKLE+E V+L ++LSQERNERRLAEY LR
Sbjct: 154 AVSKLEQESVSLQYELSQERNERRLAEYWLR 184


>emb|CAN66774.1| hypothetical protein VITISV_006776 [Vitis vinifera]
          Length = 1031

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/94 (63%), Positives = 79/94 (84%)
 Frame = -2

Query: 343 SRKTRSLLEQDITALQKQLEEEIDLHLALASAIDHSNATFSNSIGQLPDKAQELVTNIAL 164
           ++ T S+    +  LQKQL+EEIDL+LALASA +HS++ FS+S  QLP KAQEL+ +IA+
Sbjct: 487 NKATISIAHNPVKELQKQLQEEIDLNLALASAAEHSSSPFSDSF-QLPAKAQELLDSIAV 545

Query: 163 LEITVSKLEEELVALHFQLSQERNERRLAEYRLR 62
           LEITVSKLE++LVAL++QL+QERNERRL+EY LR
Sbjct: 546 LEITVSKLEQKLVALNYQLTQERNERRLSEYHLR 579


>ref|XP_002308502.1| predicted protein [Populus trichocarpa] gi|222854478|gb|EEE92025.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = -2

Query: 310 ITALQKQLEEEIDLHLALASAIDHSNATFSNSIGQLPDKAQELVTNIALLEITVSKLEEE 131
           +  LQ+QL+EEI + LALASA++HS+++ SNS  QLPDKAQEL+ +IA+LEITVSKLE+E
Sbjct: 1   VKKLQQQLQEEIAVRLALASAVEHSDSSLSNSPCQLPDKAQELLDSIAILEITVSKLEQE 60

Query: 130 LVALHFQLSQERNERRLAEYRLR 62
            VAL +QLSQERNERRLAEY LR
Sbjct: 61  SVALQYQLSQERNERRLAEYHLR 83


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