BLASTX nr result

ID: Coptis25_contig00003783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003783
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
gb|ABK93115.1| unknown [Populus trichocarpa] gi|118489648|gb|ABK...    72   5e-11
ref|XP_002321570.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255...    70   2e-10
ref|NP_974982.1| uncharacterized protein [Arabidopsis thaliana] ...    67   1e-09

>ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|222858696|gb|EEE96243.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +1

Query: 64  GFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAA 201
           GFHVEPGPRE ALL  DP+LKR+KS+ KSV+RLKR G+VLT+VV A
Sbjct: 48  GFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVA 93


>gb|ABK93115.1| unknown [Populus trichocarpa] gi|118489648|gb|ABK96625.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 100

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +1

Query: 64  GFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAA 201
           GFHVEPGPRE ALL  DP+LKR+KS+ KSV+RLKR G+VLT+VV A
Sbjct: 31  GFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVA 76


>ref|XP_002321570.1| predicted protein [Populus trichocarpa] gi|222868566|gb|EEF05697.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 64  GFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAA 201
           GFHVEPGPRE ALL  DPALK +KS+ KSV+RLKR G+VLT+VV A
Sbjct: 33  GFHVEPGPREKALLAEDPALKWFKSHKKSVWRLKRAGDVLTLVVVA 78


>ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255301 [Vitis vinifera]
           gi|297733832|emb|CBI15079.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +1

Query: 64  GFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAA 201
           GFHVEPGPRE ALL  +P+LKR+KS+ ++V+RLKRVG+VLTIVV A
Sbjct: 31  GFHVEPGPREKALLADNPSLKRFKSHKRNVWRLKRVGDVLTIVVVA 76


>ref|NP_974982.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961025|gb|ABF58996.1| At5g62575 [Arabidopsis
           thaliana] gi|332010242|gb|AED97625.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 100

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +1

Query: 64  GFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAA 201
           GFH+EPG RE ALL  D ALKR+KS+ KSV++LKR+G+VLT+VV A
Sbjct: 32  GFHIEPGTREKALLAEDSALKRFKSHKKSVHKLKRIGDVLTVVVVA 77


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