BLASTX nr result
ID: Coptis25_contig00003780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00003780 (827 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ... 150 2e-59 gb|AFK38655.1| unknown [Lotus japonicus] 150 3e-59 sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; ... 148 2e-58 ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform... 152 4e-58 ref|XP_003519220.1| PREDICTED: 60S ribosomal protein L10-like [G... 150 2e-57 >ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera] gi|297745742|emb|CBI15798.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 150 bits (380), Expect(2) = 2e-59 Identities = 73/78 (93%), Positives = 74/78 (94%) Frame = -1 Query: 827 LRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKDANGIHAQEALRRAK 648 LRINKMLSCAGADRLQTGMRGAFGKP GTCARVSIGQVLLSVRCKD N HAQEALRRAK Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAK 156 Query: 647 FKFPGRQKIIISRKWGFT 594 FKFPGRQKII+SRKWGFT Sbjct: 157 FKFPGRQKIIVSRKWGFT 174 Score = 105 bits (261), Expect(2) = 2e-59 Identities = 44/52 (84%), Positives = 51/52 (98%) Frame = -2 Query: 532 RKWGFTKFSRTDYVRWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFIDATT 377 RKWGFTKF+RTDY++WK+ENRI+PDGVNAKLLGCHGPLANRQPG+AFI+A T Sbjct: 169 RKWGFTKFNRTDYIKWKSENRILPDGVNAKLLGCHGPLANRQPGKAFINACT 220 >gb|AFK38655.1| unknown [Lotus japonicus] Length = 223 Score = 150 bits (378), Expect(2) = 3e-59 Identities = 72/78 (92%), Positives = 75/78 (96%) Frame = -1 Query: 827 LRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKDANGIHAQEALRRAK 648 LRINKMLSCAGADRLQTGMRGAFGKP GTCARV+IGQVLLSVRCKD+N HAQEALRRAK Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAK 156 Query: 647 FKFPGRQKIIISRKWGFT 594 FKFPGRQKII+SRKWGFT Sbjct: 157 FKFPGRQKIIVSRKWGFT 174 Score = 105 bits (262), Expect(2) = 3e-59 Identities = 46/52 (88%), Positives = 51/52 (98%) Frame = -2 Query: 532 RKWGFTKFSRTDYVRWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFIDATT 377 RKWGFTKFSRTDY+++K+ENRI+PDGVNAKLLGCHGPLANRQPGRAFIDA T Sbjct: 169 RKWGFTKFSRTDYLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFIDAAT 220 >sp|Q9SPB3.1|RL10_VITRI RecName: Full=60S ribosomal protein L10; AltName: Full=QM protein homolog gi|5917743|gb|AAD56018.1|AF180758_1 60S ribosomal protein L10 [Vitis riparia] Length = 220 Score = 148 bits (374), Expect(2) = 2e-58 Identities = 72/78 (92%), Positives = 73/78 (93%) Frame = -1 Query: 827 LRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKDANGIHAQEALRRAK 648 LRINKMLSCAGADRLQTGMRGAFGKP GTCARVSIGQVLLSVRCKD N HAQEALRRAK Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAK 156 Query: 647 FKFPGRQKIIISRKWGFT 594 FKFP RQKII+SRKWGFT Sbjct: 157 FKFPARQKIIVSRKWGFT 174 Score = 103 bits (258), Expect(2) = 2e-58 Identities = 43/52 (82%), Positives = 51/52 (98%) Frame = -2 Query: 532 RKWGFTKFSRTDYVRWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFIDATT 377 RKWGFTKF+RTDY++WK++NRI+PDGVNAKLLGCHGPLANRQPG+AFI+A T Sbjct: 169 RKWGFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINACT 220 >ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera] gi|225425354|ref|XP_002275270.1| PREDICTED: 60S ribosomal protein L10 isoform 1 [Vitis vinifera] Length = 224 Score = 152 bits (383), Expect(2) = 4e-58 Identities = 73/78 (93%), Positives = 75/78 (96%) Frame = -1 Query: 827 LRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKDANGIHAQEALRRAK 648 LRINKMLSCAGADRLQTGMRGAFGKP GTCARV+IGQVLLSVRCKD NG HAQEALRRAK Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAK 156 Query: 647 FKFPGRQKIIISRKWGFT 594 FKFPGRQKII+SRKWGFT Sbjct: 157 FKFPGRQKIIVSRKWGFT 174 Score = 99.8 bits (247), Expect(2) = 4e-58 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = -2 Query: 532 RKWGFTKFSRTDYVRWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFI 389 RKWGFTKFSR DYV+WK ENRIMPDGVNAKLLGCHGPLA RQPGRAF+ Sbjct: 169 RKWGFTKFSRADYVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFL 216 >ref|XP_003519220.1| PREDICTED: 60S ribosomal protein L10-like [Glycine max] Length = 222 Score = 150 bits (378), Expect(2) = 2e-57 Identities = 72/78 (92%), Positives = 75/78 (96%) Frame = -1 Query: 827 LRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKDANGIHAQEALRRAK 648 LRINKMLSCAGADRLQTGMRGAFGKP GTCARV+IGQVLLSVRCKD+N HAQEALRRAK Sbjct: 97 LRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAK 156 Query: 647 FKFPGRQKIIISRKWGFT 594 FKFPGRQKII+SRKWGFT Sbjct: 157 FKFPGRQKIIVSRKWGFT 174 Score = 99.8 bits (247), Expect(2) = 2e-57 Identities = 42/52 (80%), Positives = 50/52 (96%) Frame = -2 Query: 532 RKWGFTKFSRTDYVRWKAENRIMPDGVNAKLLGCHGPLANRQPGRAFIDATT 377 RKWGFTKFSR+DY+++K+ENRI+PDGVNAKLLGCHGPLANR+PGRAF+D T Sbjct: 169 RKWGFTKFSRSDYLKFKSENRIVPDGVNAKLLGCHGPLANREPGRAFLDTAT 220