BLASTX nr result

ID: Coptis25_contig00003768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003768
         (1877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [...   626   e-177
emb|CBI21907.3| unnamed protein product [Vitis vinifera]              592   e-166
ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|2...   580   e-163
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]   553   e-155
ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   541   e-151

>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
          Length = 450

 Score =  626 bits (1615), Expect = e-177
 Identities = 324/465 (69%), Positives = 372/465 (80%), Gaps = 4/465 (0%)
 Frame = -1

Query: 1646 MAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICG 1467
            MA EAIPNGF QN +  GSNPP  KKKRNLPG PDPEAEVIALSPKTLMATNRFLCEICG
Sbjct: 1    MAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICG 59

Query: 1466 KGFQRDQNLQLHRRGHNLPWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKH 1287
            KGFQRDQNLQLHRRGHNLPWKL+QR+SKEP+KRVYVCPEK+CVHHHPSRALGDLTGIKKH
Sbjct: 60   KGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKH 119

Query: 1286 FCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDA 1107
            FCRKHGEKKWKCEKCSKRYAVQSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDA
Sbjct: 120  FCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDA 179

Query: 1106 LAEETARVTAASNISNTMNTGNMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTRPG 927
            LAEETARVTAASNI+N    G +NYH +GTS   SM QHFSSIFKPISSN+E  DQTR G
Sbjct: 180  LAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRG 235

Query: 926  LSLWMDQGSRVGNPISNNLQELHQMASGNSV-TVYSDPFAACSNPQQSDHHQLNWMYGNK 750
            LSLWM QGS+    +  NLQE+HQ+ S  S  +VY+DP  +CSNP  S  +QL+W++G+K
Sbjct: 236  LSLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPSS-YQLSWVFGSK 294

Query: 749  LSSTNAGE--LTSTSLPIGHNIKEVPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQK 576
             SS N  +   +STSLP+  N+KE     +VS PSL+S+    H QT   NMSATALLQK
Sbjct: 295  QSSNNTEDQLTSSTSLPLS-NVKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQK 352

Query: 575  AAQIGATSTDPSFLGSSIGMKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFAS 396
            AAQ+GATS DP FLG S G+K +++ VQDGNK+   L++ N    N   D EN   D ++
Sbjct: 353  AAQMGATSADP-FLG-SFGLKCDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLST 405

Query: 395  WNQLQTHPAKRSRIQKDDTEGEQTRDFLGVGVRTMC-STSMDGWM 264
            +NQLQ +PAKR   Q DD+ G QTRDFLGVGV+T+C  +S++GWM
Sbjct: 406  FNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 450


>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  592 bits (1526), Expect = e-166
 Identities = 311/466 (66%), Positives = 354/466 (75%), Gaps = 1/466 (0%)
 Frame = -1

Query: 1658 MLENMAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 1479
            ML+ MA EAIPNGF QN +  GSNPP  KKKRNLPG PDPEAEVIALSPKTLMATNRFLC
Sbjct: 1    MLQKMAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLC 59

Query: 1478 EICGKGFQRDQNLQLHRRGHNLPWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTG 1299
            EICGKGFQRDQNLQLHRRGHNLPWKL+QR+SKEP+KRVYVCPEK+CVHHHPSRALGDLTG
Sbjct: 60   EICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTG 119

Query: 1298 IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRA 1119
            IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRA
Sbjct: 120  IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRA 179

Query: 1118 FCDALAEETARVTAASNISNTMNTGNMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQ 939
            FCDALAEETARVTAASNI+N    G +NYH +GTS   SM QHFSSIFKPISSN+E  DQ
Sbjct: 180  FCDALAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQ 235

Query: 938  TRPGLSLWMDQGSRVGNPISNNLQELHQMASGNSVTVYSDPFAACSNPQQSDHHQLNWMY 759
            TR GLSLWM QGS+    +  NLQE+HQ+ S  S                          
Sbjct: 236  TRRGLSLWMGQGSQGHETMGTNLQEIHQLRSSMSP------------------------- 270

Query: 758  GNKLSSTNAGELTSTSLPIGHNIKEVPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQ 579
            G+  ++T     +STSLP+  N+KE     +VS PSL+S+    H QT   NMSATALLQ
Sbjct: 271  GSSSNNTEDQLTSSTSLPLS-NVKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQ 328

Query: 578  KAAQIGATSTDPSFLGSSIGMKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFA 399
            KAAQ+GATS DP FLG S G+K +++ VQDGNK+   L++ N    N   D EN   D +
Sbjct: 329  KAAQMGATSADP-FLG-SFGLKCDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLS 381

Query: 398  SWNQLQTHPAKRSRIQKDDTEGEQTRDFLGVGVRTMC-STSMDGWM 264
            ++NQLQ +PAKR   Q DD+ G QTRDFLGVGV+T+C  +S++GWM
Sbjct: 382  TFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 427


>ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|222837307|gb|EEE75686.1|
            predicted protein [Populus trichocarpa]
          Length = 479

 Score =  580 bits (1495), Expect = e-163
 Identities = 316/475 (66%), Positives = 364/475 (76%), Gaps = 21/475 (4%)
 Frame = -1

Query: 1625 NGFTQNSVVVGSNPPITKKKRNLPGNPD---------PEAEVIALSPKTLMATNRFLCEI 1473
            NGF +N V  GSNPP  KKKRNLPG P          PEAEVIALSPKTLMATNRFLCEI
Sbjct: 12   NGFVENPVG-GSNPPALKKKRNLPGTPGKLEASFYSYPEAEVIALSPKTLMATNRFLCEI 70

Query: 1472 CGKGFQRDQNLQLHRRGHNLPWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIK 1293
            CGKGFQRDQNLQLHRRGHNLPWKL+QRT+KE KKRVYVCPEK+CVHHHPSRALGDLTGIK
Sbjct: 71   CGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKRVYVCPEKTCVHHHPSRALGDLTGIK 130

Query: 1292 KHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFC 1113
            KHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHRAFC
Sbjct: 131  KHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFC 190

Query: 1112 DALAEETARVTAASNISNTMNTGNMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTR 933
            DALAEETARV A S+I+N +  G++NYHL+G   G +M QHFSSIFKPISSN+    QTR
Sbjct: 191  DALAEETARVNAVSSINN-LTAGSINYHLMGNPLGPNMAQHFSSIFKPISSNDH---QTR 246

Query: 932  P-GLSLWMDQG-SRVGNPI-SNNLQELHQMASGNSV-TVYSDPFA-ACSNPQQSDHHQLN 768
              G+SLWM+QG  +V   +  NN+QE+HQ+ S NS   ++ D  A +CS+   SDH+Q N
Sbjct: 247  QGGVSLWMNQGVPQVSEALMGNNIQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQFN 306

Query: 767  W-MYGNKLSSTNA-GELTSTSLPIGHNIKE-VPSPHLVSAPSLFSTHLQPHQQTTSANMS 597
            W ++GNK+SS NA  ELTST +    N+KE   +  L S PSL+ST  Q   QTTSANMS
Sbjct: 307  WPVFGNKISSNNAHEELTSTLVLPLTNVKEAAAASQLASVPSLYSTQQQQSHQTTSANMS 366

Query: 596  ATALLQKAAQIGATSTDPSFLGSSIGMKSNNNYVQDGNKYNNALFSLNATSDNIRTDQEN 417
            ATALLQKAAQIGATSTDPSFLG S  +KSN   VQDGNK+   L+  +  S N  +D EN
Sbjct: 367  ATALLQKAAQIGATSTDPSFLG-SFALKSNAKKVQDGNKF-CGLYGSSPVSTNPASDVEN 424

Query: 416  SIGD-FASWNQLQTHPAKRSRIQ--KDDTEGEQTRDFLGVGVRTMC-STSMDGWM 264
            S  D  +S NQLQ +P ++   Q  +D   G QTRDFLGVGV+ +C  +S++GW+
Sbjct: 425  SGSDQISSLNQLQMYPKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI 479


>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
          Length = 403

 Score =  553 bits (1425), Expect = e-155
 Identities = 285/417 (68%), Positives = 332/417 (79%), Gaps = 4/417 (0%)
 Frame = -1

Query: 1502 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLRQRTSKEPKKRVYVCPEKSCVHHHPS 1323
            MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKL+QR+SKEP+KRVYVCPEK+CVHHHPS
Sbjct: 1    MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPS 60

Query: 1322 RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 1143
            RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH+KTCGTREY+CDCGTLFSRR
Sbjct: 61   RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRR 120

Query: 1142 DSFITHRAFCDALAEETARVTAASNISNTMNTGNMNYHLIGTSHGASMVQHFSSIFKPIS 963
            DSFITHRAFCDALAEETARVTAASNI+N    G +NYH +GTS   SM QHFSSIFKPIS
Sbjct: 121  DSFITHRAFCDALAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPIS 176

Query: 962  SNNETIDQTRPGLSLWMDQGSRVGNPISNNLQELHQMASGNSV-TVYSDPFAACSNPQQS 786
            SN+E  DQTR GLSLWM QGS+    +  NLQE+HQ+ S  S  +VY+DP  +CSNP  S
Sbjct: 177  SNDEATDQTRRGLSLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPS 236

Query: 785  DHHQLNWMYGNKLSSTNAGE--LTSTSLPIGHNIKEVPSPHLVSAPSLFSTHLQPHQQTT 612
              +QL+W++G+K SS N  +   +STSLP+  N+KE     +VS PSL+S+    H QT 
Sbjct: 237  S-YQLSWVFGSKQSSNNTEDQLTSSTSLPLS-NVKEAAGSQIVSVPSLYSSQHHSH-QTP 293

Query: 611  SANMSATALLQKAAQIGATSTDPSFLGSSIGMKSNNNYVQDGNKYNNALFSLNATSDNIR 432
              NMSATALLQKAAQ+GATS DP FLG S G+K +++ VQDGNK+   L++ N    N  
Sbjct: 294  LGNMSATALLQKAAQMGATSADP-FLG-SFGLKCDSSLVQDGNKF-CGLYTANQLPTN-- 348

Query: 431  TDQENSIGDFASWNQLQTHPAKRSRIQKDDTEGEQTRDFLGVGVRTMC-STSMDGWM 264
             D EN   D +++NQLQ +PAKR   Q DD+ G QTRDFLGVGV+T+C  +S++GWM
Sbjct: 349  -DMENP-KDLSTFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 403


>ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
            [Glycine max]
          Length = 466

 Score =  541 bits (1393), Expect = e-151
 Identities = 291/479 (60%), Positives = 353/479 (73%), Gaps = 17/479 (3%)
 Frame = -1

Query: 1652 ENMAGEAIPNGFTQNSVVVGSN--PPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 1479
            E M   A P   T ++     N  PP  K+KRNLPGNPDPEA+VIALSPKTLMATNRFLC
Sbjct: 5    EIMTNIAFPQNLTASAASSDHNNPPPSLKRKRNLPGNPDPEAQVIALSPKTLMATNRFLC 64

Query: 1478 EICGKGFQRDQNLQLHRRGHNLPWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTG 1299
            E CGKGFQRDQNLQLHRRGHNLPWKL+QRT KE +KRVYVCPEKSCVHH PSRALGDLTG
Sbjct: 65   ETCGKGFQRDQNLQLHRRGHNLPWKLKQRTGKEARKRVYVCPEKSCVHHDPSRALGDLTG 124

Query: 1298 IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRA 1119
            IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREY+CDCGT+FSRRDSFITHRA
Sbjct: 125  IKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRA 184

Query: 1118 FCDALAEETARVTAASNISNTMNTGNMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQ 939
            FCDALAEETARV AAS+I NT   GN+ Y+++GTS G +M  HF SIFKPISS +ET +Q
Sbjct: 185  FCDALAEETARVNAASDI-NTSLGGNIGYNIMGTSLGPNMATHFPSIFKPISSTDETSNQ 243

Query: 938  TRPGLSLWMDQGSRVGNP--ISNNLQELHQM--ASGNSVTVY-SDPFAACSNPQQSDHHQ 774
            T  GL LWM Q S       ++ N +E+HQ+  A+ +S T+Y  +     SN   S+++Q
Sbjct: 244  TSRGLPLWMGQTSSQAQETMVNTNFREIHQLGSATSSSGTMYGGNSILQYSNLPPSNNYQ 303

Query: 773  LNWMYGNKLS-STNAGEL-----TSTSLPIGHNIKEVPSPHLVSAPSLFSTHLQPHQQTT 612
            L+W++G K+S S+N  EL     T+TSLPIG++          S PSL+ +  QP Q  +
Sbjct: 304  LSWVFGTKISNSSNNQELTTNTTTTTSLPIGNS----------SVPSLYCSQHQPQQTCS 353

Query: 611  SANMSATALLQKAAQIGATSTDPSFLGSSIGMKSNNNYVQDG--NKYNNALFSLNATSDN 438
            SANMSATALLQKAAQIGATS+DPS+LG S+G+K  N+  QDG  NKY++ ++  +     
Sbjct: 354  SANMSATALLQKAAQIGATSSDPSWLG-SLGLKCGNSQGQDGNNNKYSD-MYGSSLVLTT 411

Query: 437  IRTDQENSIGDFASWNQLQTHPAKRSRIQKDDTEGEQTRDFLGVGVR-TMCST-SMDGW 267
            + ++ +NS  + +     Q HP KR  +  +++ G QTRDFLGVGV+ T+C T S+ GW
Sbjct: 412  LGSEADNSACELS-----QMHPHKRRHVLNEESGGGQTRDFLGVGVQXTICHTSSIKGW 465


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