BLASTX nr result

ID: Coptis25_contig00003767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003767
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycin...   153   2e-61
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   152   3e-61
ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycin...   153   3e-60
gb|AFK49171.1| unknown [Lotus japonicus]                              152   1e-59
ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|1...   143   7e-58

>ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycine max]
           gi|255626189|gb|ACU13439.1| unknown [Glycine max]
          Length = 184

 Score =  153 bits (387), Expect(2) = 2e-61
 Identities = 77/109 (70%), Positives = 85/109 (77%)
 Frame = -1

Query: 887 KTPKKANLLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPK 708
           K PKKANLLD ++IK+ILDES+SE+V SRGY EDV+LSN +             AQFY K
Sbjct: 4   KVPKKANLLDHHSIKHILDESVSEVVTSRGYVEDVRLSNARLFIGAIIIVIALFAQFYKK 63

Query: 707 KFPENKDVLIACIILYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTG 561
           KFPEN+D LIACI LYVIFNGLLQLIIYTKEKNAILFT PP GSF STG
Sbjct: 64  KFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTG 112



 Score =  110 bits (275), Expect(2) = 2e-61
 Identities = 56/79 (70%), Positives = 59/79 (74%)
 Frame = -3

Query: 498 GSFNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLF 319
           GSF STGLV+SSKLPRFSDMYTL          SA +PV FTKSVT+WFTKDGILVEGLF
Sbjct: 106 GSFTSTGLVVSSKLPRFSDMYTLTIASADPKSISANEPVHFTKSVTQWFTKDGILVEGLF 165

Query: 318 WKDVNGLINQYTGESSKNK 262
           WKDV  LI QYT E  K K
Sbjct: 166 WKDVEALIVQYTKEPKKGK 184


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  152 bits (385), Expect(2) = 3e-61
 Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
 Frame = -1

Query: 914 MASTNISPKKTPKKANLLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXX 735
           MAS N +  K PKKANLLD ++IK+ILDE +SEIV SRGY EDV++SNV+          
Sbjct: 1   MASNNNNSNKNPKKANLLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIII 60

Query: 734 XXIAQFYPKKFPENKDVLIACIIL-----YVIFNGLLQLIIYTKEKNAILFTLPPTGSFN 570
             +AQFYPKKFPEN+D LI CI+L     Y++FNGLLQLIIYTKEKNAILFT PP G FN
Sbjct: 61  ALVAQFYPKKFPENRDFLIVCILLYPFCCYILFNGLLQLIIYTKEKNAILFTHPPEGFFN 120

Query: 569 STG 561
           STG
Sbjct: 121 STG 123



 Score =  110 bits (275), Expect(2) = 3e-61
 Identities = 54/79 (68%), Positives = 59/79 (74%)
 Frame = -3

Query: 498 GSFNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLF 319
           G FNSTGLV+SSKLPRFSD+YTL          +A  PV+FTKSVT+WFT DGILVEGLF
Sbjct: 117 GFFNSTGLVVSSKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLF 176

Query: 318 WKDVNGLINQYTGESSKNK 262
           WKDV GLIN Y  E  KNK
Sbjct: 177 WKDVEGLINDYAREPKKNK 195


>ref|NP_001238488.1| uncharacterized protein LOC100499695 [Glycine max]
           gi|255625849|gb|ACU13269.1| unknown [Glycine max]
          Length = 184

 Score =  153 bits (387), Expect(2) = 3e-60
 Identities = 77/109 (70%), Positives = 86/109 (78%)
 Frame = -1

Query: 887 KTPKKANLLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPK 708
           K PKKANLLD ++IK+ILDES+SE+V SRG+ EDV+LSNV+             AQFY K
Sbjct: 4   KAPKKANLLDHHSIKHILDESVSEVVTSRGFVEDVRLSNVRLLIGAIIIVIALFAQFYKK 63

Query: 707 KFPENKDVLIACIILYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTG 561
           KFPEN+D LIACI LYVIFNGLLQLIIYTKEKNAILFT PP GSF STG
Sbjct: 64  KFPENRDFLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTG 112



 Score =  106 bits (265), Expect(2) = 3e-60
 Identities = 54/79 (68%), Positives = 58/79 (73%)
 Frame = -3

Query: 498 GSFNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLF 319
           GSF STGLV+SSKLPRFSDMYTL          SA   V FTKSVT+WFTKDG+LVEGLF
Sbjct: 106 GSFTSTGLVVSSKLPRFSDMYTLTIAGADPKSISANDQVHFTKSVTQWFTKDGVLVEGLF 165

Query: 318 WKDVNGLINQYTGESSKNK 262
           WKDV  LI QYT E  K+K
Sbjct: 166 WKDVEALIVQYTKEPKKSK 184


>gb|AFK49171.1| unknown [Lotus japonicus]
          Length = 184

 Score =  152 bits (383), Expect(2) = 1e-59
 Identities = 77/109 (70%), Positives = 86/109 (78%)
 Frame = -1

Query: 887 KTPKKANLLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPK 708
           K+ KKANLLD N+IK+ILDES+SEIV SRGY EDV+LSNV+             AQFY K
Sbjct: 4   KSLKKANLLDHNSIKHILDESVSEIVTSRGYVEDVRLSNVRLLVGTVIIVIALFAQFYKK 63

Query: 707 KFPENKDVLIACIILYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTG 561
           KFPEN+D L+ACI LYVIFNG+LQLIIYTKEKNAILFT PP GSF STG
Sbjct: 64  KFPENRDFLLACIALYVIFNGVLQLIIYTKEKNAILFTYPPAGSFTSTG 112



 Score =  106 bits (264), Expect(2) = 1e-59
 Identities = 53/79 (67%), Positives = 58/79 (73%)
 Frame = -3

Query: 498 GSFNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLF 319
           GSF STGLV+SSKLPRFSDMYTL          SA +P   TKSVT+WFTKDG+LVEGLF
Sbjct: 106 GSFTSTGLVVSSKLPRFSDMYTLTIASADPKSISANEPKHLTKSVTQWFTKDGVLVEGLF 165

Query: 318 WKDVNGLINQYTGESSKNK 262
           WKDV  LI QYT E  K+K
Sbjct: 166 WKDVEALIAQYTKEPKKSK 184


>ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|118489054|gb|ABK96334.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864216|gb|EEF01347.1| predicted protein [Populus
           trichocarpa]
          Length = 191

 Score =  143 bits (360), Expect(2) = 7e-58
 Identities = 69/109 (63%), Positives = 84/109 (77%)
 Frame = -1

Query: 887 KTPKKANLLDQNAIKNILDESISEIVKSRGYPEDVKLSNVKXXXXXXXXXXXXIAQFYPK 708
           K PKKANLLD ++IK+ILDES+SEIV SRGY EDV++SN++             AQFY K
Sbjct: 11  KKPKKANLLDHHSIKHILDESVSEIVTSRGYEEDVRMSNIRLFFGTIIIVIALFAQFYNK 70

Query: 707 KFPENKDVLIACIILYVIFNGLLQLIIYTKEKNAILFTLPPTGSFNSTG 561
           KFP+N++ LI CI+LY++FNGLLQLII+ KEKNAIL T PP GSF STG
Sbjct: 71  KFPQNREFLIGCIVLYIVFNGLLQLIIHLKEKNAILVTYPPKGSFTSTG 119



 Score =  108 bits (271), Expect(2) = 7e-58
 Identities = 55/79 (69%), Positives = 59/79 (74%)
 Frame = -3

Query: 498 GSFNSTGLVISSKLPRFSDMYTLXXXXXXXXXXSAGKPVQFTKSVTKWFTKDGILVEGLF 319
           GSF STGLV+SSKLPRFSD YTL          SAGKPVQFTKSVT+ FTKDG+LVEGLF
Sbjct: 113 GSFTSTGLVVSSKLPRFSDEYTLTIASADPKSISAGKPVQFTKSVTQCFTKDGVLVEGLF 172

Query: 318 WKDVNGLINQYTGESSKNK 262
           WKDV  LIN Y  E  K+K
Sbjct: 173 WKDVEALINDYAAEPKKSK 191


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