BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003766
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318458.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   133   5e-29
gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 ...   132   8e-29
ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidop...   132   8e-29
ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arab...   132   8e-29

>ref|XP_002318458.1| predicted protein [Populus trichocarpa] gi|222859131|gb|EEE96678.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  135 bits (341), Expect = 1e-29
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 39  HSEFRVVVRGLPSSASWQDLKDYMRKAGDVTYAQVYRKGDGAIGHVDYTNYEDMKYAIRK 218
           HSEFRV+VRGLPSSASWQDLKD+MRKAGDV +A+V R GDG +G VDYTN+EDMKYAIRK
Sbjct: 121 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRK 180

Query: 219 LDDTEFKNPFSKGYIRVEAF 278
           LDDTEFKNP+++ YIRV+ +
Sbjct: 181 LDDTEFKNPWARAYIRVKQY 200


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  133 bits (335), Expect = 5e-29
 Identities = 61/80 (76%), Positives = 71/80 (88%)
 Frame = +3

Query: 39  HSEFRVVVRGLPSSASWQDLKDYMRKAGDVTYAQVYRKGDGAIGHVDYTNYEDMKYAIRK 218
           HSEFRV+VRGLPSSASWQDLKD+MRKAGDV +A+V R  DG  G VDYTNYEDMKYAIRK
Sbjct: 114 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRK 173

Query: 219 LDDTEFKNPFSKGYIRVEAF 278
           LDDTEF+NP+++ YIRV+ +
Sbjct: 174 LDDTEFRNPWARAYIRVKMY 193


>gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
          Length = 295

 Score =  132 bits (333), Expect = 8e-29
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  HSEFRVVVRGLPSSASWQDLKDYMRKAGDVTYAQVYRKGDGAIGHVDYTNYEDMKYAIRK 218
           HSEFRV+VRGLPSSASWQDLKD+MRKAGDV +A+V R  DG  G VDYTNY+DMKYAIRK
Sbjct: 119 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 178

Query: 219 LDDTEFKNPFSKGYIRVEAF 278
           LDDTEF+NP+++G+IRV+ +
Sbjct: 179 LDDTEFRNPWARGFIRVKKY 198


>ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
           gi|334185842|ref|NP_001190041.1| putative Pre-mRNA
           splicing factor SF2 [Arabidopsis thaliana]
           gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis
           thaliana] gi|332645020|gb|AEE78541.1| putative Pre-mRNA
           splicing factor SF2 [Arabidopsis thaliana]
           gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing
           factor SF2 [Arabidopsis thaliana]
          Length = 300

 Score =  132 bits (333), Expect = 8e-29
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  HSEFRVVVRGLPSSASWQDLKDYMRKAGDVTYAQVYRKGDGAIGHVDYTNYEDMKYAIRK 218
           HSEFRV+VRGLPSSASWQDLKD+MRKAGDV +A+V R  DG  G VDYTNY+DMKYAIRK
Sbjct: 119 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 178

Query: 219 LDDTEFKNPFSKGYIRVEAF 278
           LDDTEF+NP+++G+IRV+ +
Sbjct: 179 LDDTEFRNPWARGFIRVKKY 198


>ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
           lyrata] gi|297321802|gb|EFH52223.1| hypothetical protein
           ARALYDRAFT_906222 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  132 bits (333), Expect = 8e-29
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +3

Query: 39  HSEFRVVVRGLPSSASWQDLKDYMRKAGDVTYAQVYRKGDGAIGHVDYTNYEDMKYAIRK 218
           HSEFRV+VRGLPSSASWQDLKD+MRKAGDV +A+V R  DG  G VDYTNY+DMKYAIRK
Sbjct: 120 HSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRK 179

Query: 219 LDDTEFKNPFSKGYIRVEAF 278
           LDDTEF+NP+++G+IRV+ +
Sbjct: 180 LDDTEFRNPWARGFIRVKKY 199