BLASTX nr result

ID: Coptis25_contig00003765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003765
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-li...   269   9e-70
ref|XP_002511657.1| vesicle-associated membrane protein, putativ...   261   1e-67
ref|XP_002304271.1| predicted protein [Populus trichocarpa] gi|2...   258   2e-66
ref|XP_002528929.1| vesicle-associated membrane protein, putativ...   257   3e-66
ref|NP_001235987.1| uncharacterized protein LOC100527687 [Glycin...   255   1e-65

>ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-like [Vitis vinifera]
           gi|296089208|emb|CBI38911.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  269 bits (687), Expect = 9e-70
 Identities = 136/213 (63%), Positives = 158/213 (74%)
 Frame = -3

Query: 878 MSWGELLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVL 699
           MS GELL ++PQEL+FP EL+KQ+SCSLQLSN T+N++AFKVKTTNPKKYCVRPNTG+V+
Sbjct: 1   MSTGELLSIEPQELQFPFELRKQISCSLQLSNKTDNFVAFKVKTTNPKKYCVRPNTGVVM 60

Query: 698 PRSTSDVTVTMQAQREFPSDMQCKDKFLLQSVTASPGTTPKDINADMFNKESGNLVEECK 519
           PRST DV VTMQAQRE P DMQCKDKFLLQS  ASPG T KDI +DMFNKE+GN VEECK
Sbjct: 61  PRSTCDVIVTMQAQRETPQDMQCKDKFLLQSAIASPGATAKDITSDMFNKEAGNRVEECK 120

Query: 518 LRVIYXXXXXXXXXXXXXXXXXXXXXXXXXENGNFSTSDSAFVPRIYGDSQEQSSEANSL 339
           LRV Y                         +NGN + S+   V R Y + Q+ SSEA +L
Sbjct: 121 LRVAYVPPPQPPSPVREGSEEGSSPRASVSDNGNINASEFTAVSRAYVEPQDNSSEARAL 180

Query: 338 ISKLTEEKTSAIQQANKLRQELELMKHESNKSR 240
           ISKLTEEK SAIQQ NKL+QELE ++ ESN+SR
Sbjct: 181 ISKLTEEKKSAIQQNNKLQQELEFLRRESNRSR 213


>ref|XP_002511657.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223548837|gb|EEF50326.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 241

 Score =  261 bits (668), Expect = 1e-67
 Identities = 134/216 (62%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
 Frame = -3

Query: 878 MSWGELLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVL 699
           MS GELL ++PQEL+FPLEL+KQ+SCSLQL N ++NY+AFKVKTTNPKKYCVRPNTG+VL
Sbjct: 1   MSTGELLTIEPQELQFPLELRKQISCSLQLLNKSDNYVAFKVKTTNPKKYCVRPNTGVVL 60

Query: 698 PRSTSDVTVTMQAQREFPSDMQCKDKFLLQSVTASPGTTPKDINADMFNKESGNLVEECK 519
           PRST DV VTMQAQ+E P DMQCKDKFLLQSV ASPG T KDINA+MFNKE+G+ VEECK
Sbjct: 61  PRSTCDVIVTMQAQKEAPLDMQCKDKFLLQSVIASPGATAKDINAEMFNKEAGHQVEECK 120

Query: 518 LRVIYXXXXXXXXXXXXXXXXXXXXXXXXXENGNFSTSDSAFVPRIYG---DSQEQSSEA 348
           LRV+Y                         +NGN S S+   V + +    + Q+ S EA
Sbjct: 121 LRVVYVAPPGPPSPVREGSEEGSSPRASVSDNGNLSASERTVVLKTFAERHEPQDNSIEA 180

Query: 347 NSLISKLTEEKTSAIQQANKLRQELELMKHESNKSR 240
            +LISKLTEEK SAIQQ  KL+QELEL++H+S++SR
Sbjct: 181 RALISKLTEEKNSAIQQNKKLQQELELLRHQSSRSR 216


>ref|XP_002304271.1| predicted protein [Populus trichocarpa] gi|222841703|gb|EEE79250.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  258 bits (659), Expect = 2e-66
 Identities = 136/218 (62%), Positives = 161/218 (73%), Gaps = 5/218 (2%)
 Frame = -3

Query: 878 MSWGELLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVL 699
           MS GELL ++P ELKFP ELKKQ+SCSLQLSN T+NY+AFKVKTTNPKKYCVRPN GIVL
Sbjct: 1   MSTGELLGIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVL 60

Query: 698 PRSTSDVTVTMQAQREFPSDMQCKDKFLLQSVTASPGTTPKDINADMFNKESGNLVEECK 519
           PRST DV VTMQAQ+E P+DMQCKDKFLLQSV  + G T KDINA+MF+KE+G+ VEECK
Sbjct: 61  PRSTCDVIVTMQAQKEAPTDMQCKDKFLLQSVKTNDGVTAKDINAEMFSKEAGHHVEECK 120

Query: 518 LRVIYXXXXXXXXXXXXXXXXXXXXXXXXXENGN-----FSTSDSAFVPRIYGDSQEQSS 354
           LRV+Y                         +NGN      ST+  AFV R+  + QE+S 
Sbjct: 121 LRVLYVSPPQPPSPVQEGSEEGSSPRGSVSDNGNVTGTDLSTATRAFVERL--EPQEKSL 178

Query: 353 EANSLISKLTEEKTSAIQQANKLRQELELMKHESNKSR 240
           EA +LISKLT+EK +AIQQ NKLRQELEL++H+ NK+R
Sbjct: 179 EARALISKLTDEKNNAIQQNNKLRQELELLRHQGNKNR 216


>ref|XP_002528929.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223531631|gb|EEF33458.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 240

 Score =  257 bits (657), Expect = 3e-66
 Identities = 133/216 (61%), Positives = 159/216 (73%), Gaps = 3/216 (1%)
 Frame = -3

Query: 878 MSWGELLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVL 699
           MS GELL +DP ELKFP ELKKQ+SCSLQLSN T++Y+AFKVKTTNPKKYCVRPN GIVL
Sbjct: 1   MSTGELLSIDPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNAGIVL 60

Query: 698 PRSTSDVTVTMQAQREFPSDMQCKDKFLLQSVTASPGTTPKDINADMFNKESGNLVEECK 519
           PRST DV VTMQAQ+E P D+QCKDKFLLQSV    G + KDINA+MFNKE+G++VEECK
Sbjct: 61  PRSTCDVIVTMQAQKEAPPDLQCKDKFLLQSVKTHDGASAKDINAEMFNKEAGHVVEECK 120

Query: 518 LRVIYXXXXXXXXXXXXXXXXXXXXXXXXXENGNFSTSDSAFVPRIYG---DSQEQSSEA 348
           LRV+Y                         +NGN + S+ +   + +G   ++Q++SSEA
Sbjct: 121 LRVLYVSPPQPPSPVPEGSEEESSPRGSVSDNGNVTGSEFSNAAKAFGERFETQDKSSEA 180

Query: 347 NSLISKLTEEKTSAIQQANKLRQELELMKHESNKSR 240
            SLISKL EEK +AIQQ NKLRQELEL+K E NK+R
Sbjct: 181 KSLISKLNEEKNNAIQQNNKLRQELELLKREGNKNR 216


>ref|NP_001235987.1| uncharacterized protein LOC100527687 [Glycine max]
           gi|255632954|gb|ACU16831.1| unknown [Glycine max]
          Length = 237

 Score =  255 bits (652), Expect = 1e-65
 Identities = 135/216 (62%), Positives = 159/216 (73%), Gaps = 3/216 (1%)
 Frame = -3

Query: 878 MSWGELLRVDPQELKFPLELKKQVSCSLQLSNNTENYIAFKVKTTNPKKYCVRPNTGIVL 699
           MS GELL ++P ELKFP ELKKQ+SCSLQLSN T++Y+AFKVKTTNPKKYCVRPNTGIV 
Sbjct: 1   MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVT 60

Query: 698 PRSTSDVTVTMQAQREFPSDMQCKDKFLLQSVTASPGTTPKDINADMFNKESGNLVEECK 519
           PRST DV VTMQAQ+E P+DMQCKDKFLLQSV    GT+PKDI ADMFNKE+G++VEECK
Sbjct: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECK 120

Query: 518 LRVIYXXXXXXXXXXXXXXXXXXXXXXXXXENGNFSTSDSAFVPRIY---GDSQEQSSEA 348
           LRV+Y                         ENGN + SD     R +    +SQ++S+EA
Sbjct: 121 LRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDKSAEA 180

Query: 347 NSLISKLTEEKTSAIQQANKLRQELELMKHESNKSR 240
            +LIS+LTEEK +AIQQ +KL QELEL+K  SNKSR
Sbjct: 181 RALISRLTEEKNNAIQQNSKLHQELELLKEGSNKSR 216


Top