BLASTX nr result

ID: Coptis25_contig00003762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003762
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22919.3| unnamed protein product [Vitis vinifera]              153   3e-35
emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]   152   4e-35
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_003534826.1| PREDICTED: uncharacterized protein LOC100777...   140   2e-31
ref|XP_002519186.1| conserved hypothetical protein [Ricinus comm...   140   3e-31

>emb|CBI22919.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score =  153 bits (386), Expect = 3e-35
 Identities = 85/162 (52%), Positives = 108/162 (66%), Gaps = 10/162 (6%)
 Frame = +3

Query: 210 EKQGTKSGS--GGFLQLFDWNRKSRKKLFSNKSDFSEGSNQGKRSSVNLQI------DED 365
           EKQG+KSG   GGF QLFDWN KSRKKLFSNKSD  E S QGK+S  NL +      D+D
Sbjct: 4   EKQGSKSGGYVGGFFQLFDWNAKSRKKLFSNKSDLPERSKQGKKSDGNLPMTRFRLTDDD 63

Query: 366 DIGRXXXXXXXXXXXXXX-VTDDEGNGVKAPGVVARLMGLDSLPTATVAEPYSTPFFDTR 542
           + G                VTD+EG G +APGVVARLMGLDSLP + ++EPYS+PFFD++
Sbjct: 64  EAGATPSFKGSSDYSCGSSVTDEEGYGTRAPGVVARLMGLDSLPPSNISEPYSSPFFDSQ 123

Query: 543 SLRDAPY-RRTPDFLYERQLMHSGKQPPKLEGFSRNLVEPMP 665
           SLRD  Y R+  DF ++ Q+MHSG    +++G SR+ ++  P
Sbjct: 124 SLRDVHYNRKNFDFHHDHQIMHSGNLLNRVDGPSRSAMDLKP 165


>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score =  152 bits (385), Expect = 4e-35
 Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 11/163 (6%)
 Frame = +3

Query: 210 EKQGTKSGS--GGFLQLFDWNRKSRKKLFSNKSDFSEGSNQGKRSSVNLQI-------DE 362
           EKQG+KSG   GGF QLFDWN KSRKKLFSNKSD  E S QGK+S  NL +       D+
Sbjct: 4   EKQGSKSGGYVGGFFQLFDWNAKSRKKLFSNKSDLPERSKQGKKSDGNLPMTRFRLVTDD 63

Query: 363 DDIGRXXXXXXXXXXXXXX-VTDDEGNGVKAPGVVARLMGLDSLPTATVAEPYSTPFFDT 539
           D+ G                VTD+EG G +APGVVARLMGLDSLP + ++EPYS+PFFD+
Sbjct: 64  DEAGATPSFKGSSDYSCGSSVTDEEGYGTRAPGVVARLMGLDSLPPSNISEPYSSPFFDS 123

Query: 540 RSLRDAPY-RRTPDFLYERQLMHSGKQPPKLEGFSRNLVEPMP 665
           +SLRD  Y R+  DF ++ Q+MHSG    +++G SR+ ++  P
Sbjct: 124 QSLRDVHYNRKNFDFHHDHQIMHSGNLLNRVDGPSRSAMDLKP 166


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  147 bits (371), Expect = 2e-33
 Identities = 85/166 (51%), Positives = 107/166 (64%), Gaps = 11/166 (6%)
 Frame = +3

Query: 201 IGMEKQGTKSGSG---GFLQLFDWNRKSRKKLFSNKSDFSEGSNQGKRSSVNLQI----- 356
           +G+EK+G+KSG G   GF QLFDW  KSRKKLFS+KSD  E S QGKR+  +L++     
Sbjct: 1   MGIEKEGSKSGGGYVGGFFQLFDWTAKSRKKLFSSKSDLQELSKQGKRNGGSLRMTRLRL 60

Query: 357 -DEDDIGRXXXXXXXXXXXXXX-VTDDEGNGVKAPGVVARLMGLDSLPTATVAEPYSTPF 530
            D+DD G                VTDDEG G +APGVVARLMGLDS+PT+   EP STPF
Sbjct: 61  MDDDDTGAGSSIRGGSDYSCASSVTDDEGYGARAPGVVARLMGLDSMPTSNFLEPNSTPF 120

Query: 531 FDTRSLRDAPY-RRTPDFLYERQLMHSGKQPPKLEGFSRNLVEPMP 665
           FDT+SLRDA   +R  D+ ++ Q+ +SG    K +G  RNLV+  P
Sbjct: 121 FDTQSLRDASRGKRNFDYYHDHQITYSGNLLNKEDGPPRNLVKSKP 166


>ref|XP_003534826.1| PREDICTED: uncharacterized protein LOC100777900 [Glycine max]
          Length = 935

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/160 (48%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
 Frame = +3

Query: 201 IGMEKQGTKSGSG---GFLQLFDWNRKSRKKLFSNKSDFSEGSNQGKRSSVNLQIDEDDI 371
           +G+EK GTKSG G   GF QLFDW+ KSRKKLF+ KSD  E    G++   N+ +DED+I
Sbjct: 1   MGVEKDGTKSGGGYVGGFFQLFDWSSKSRKKLFAAKSDLPESLKLGRKVDYNV-VDEDEI 59

Query: 372 G-RXXXXXXXXXXXXXXVTDDEGNGVKAPGVVARLMGLDSLPTATVAEPYSTPFFDTRSL 548
           G                VTDD+  G +AP VVARLMGLDSLP ++ ++PYSTP+FDTRSL
Sbjct: 60  GVGASVRGSCDHSYASSVTDDDAYGTRAPSVVARLMGLDSLPPSSFSDPYSTPYFDTRSL 119

Query: 549 RDAPY-RRTPDFLYERQLMHSGKQPPKLEGFSRNLVEPMP 665
           +D+ Y ++     ++    +SGK   K+EG SRN ++P P
Sbjct: 120 QDSHYFKKNLGHQHDHHTPYSGKLVEKVEGSSRNFMDPKP 159


>ref|XP_002519186.1| conserved hypothetical protein [Ricinus communis]
           gi|223541501|gb|EEF43050.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 847

 Score =  140 bits (352), Expect = 3e-31
 Identities = 82/166 (49%), Positives = 105/166 (63%), Gaps = 11/166 (6%)
 Frame = +3

Query: 201 IGMEKQGTKSGSG---GFLQLFDWNRKSRKKLFSNKSDFSEGSNQGKRSSVNLQI----- 356
           +G+EK+G+K+G+G   GF QLFDW  KSRKKLFS+KSD    S QGKRS  NL +     
Sbjct: 1   MGVEKEGSKNGAGYVGGFFQLFDWTAKSRKKLFSSKSDLPARSKQGKRSDGNLPMTRLNL 60

Query: 357 -DEDDIGRXXXXXXXXXXXXXX-VTDDEGNGVKAPGVVARLMGLDSLPTATVAEPYSTPF 530
            DED+                  VTDD+G G +APGVVARLMGLDS+PT++ AEP  TPF
Sbjct: 61  MDEDETAAGSSIRGSSDYSCASSVTDDDGFGARAPGVVARLMGLDSMPTSSFAEPNCTPF 120

Query: 531 FDTRSLRDAPYRRTP-DFLYERQLMHSGKQPPKLEGFSRNLVEPMP 665
            DT+SLR+A  RR   ++ ++ Q+M+SG    K EG  RN +E  P
Sbjct: 121 LDTQSLREASQRRKHFEYYHDPQIMYSGILLNKEEGPPRNFLESKP 166


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