BLASTX nr result

ID: Coptis25_contig00003761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003761
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPas...   590   e-166
ref|XP_002269668.1| PREDICTED: probable 26S proteasome non-ATPas...   578   e-162
ref|XP_002312144.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase sub...   572   e-161
ref|XP_003538451.1| PREDICTED: probable 26S proteasome non-ATPas...   570   e-160

>ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
            [Vitis vinifera] gi|297740235|emb|CBI30417.3| unnamed
            protein product [Vitis vinifera]
          Length = 310

 Score =  590 bits (1522), Expect = e-166
 Identities = 294/310 (94%), Positives = 306/310 (98%)
 Frame = +1

Query: 103  MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 282
            MDVIKTQQISSRP+EKV+VHPLVLLSIVDNYNRVA+DTRKRV+GVLLGSSFKGTVDVTNS
Sbjct: 1    MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVIGVLLGSSFKGTVDVTNS 60

Query: 283  YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 462
            YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIH LFH
Sbjct: 61   YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFH 120

Query: 463  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 642
            DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV
Sbjct: 121  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 180

Query: 643  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVIDGKLPINHEILCHLQD 822
            EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREI+ YLDLV+DGKLP+NHEIL HLQD
Sbjct: 181  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDLVVDGKLPLNHEILYHLQD 240

Query: 823  VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 1002
            VFNLLPNLNVAELIKAF+VKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK
Sbjct: 241  VFNLLPNLNVAELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 300

Query: 1003 PSAVPAASGS 1032
            P+AVPA +GS
Sbjct: 301  PAAVPAVAGS 310


>ref|XP_002269668.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
            [Vitis vinifera] gi|297742338|emb|CBI34487.3| unnamed
            protein product [Vitis vinifera]
          Length = 310

 Score =  578 bits (1489), Expect = e-162
 Identities = 288/310 (92%), Positives = 303/310 (97%)
 Frame = +1

Query: 103  MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 282
            MDVIKTQQISSRP+EKV+VHPLVLLSIVDNYNRVA+DT KRV+GVLLGSSFKGTVDVTNS
Sbjct: 1    MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTHKRVIGVLLGSSFKGTVDVTNS 60

Query: 283  YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 462
            YAVPFEE++KDPSI FLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH
Sbjct: 61   YAVPFEEDDKDPSICFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 120

Query: 463  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 642
            +YVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVH+PSEIAAHEVEEIGV
Sbjct: 121  EYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHIPSEIAAHEVEEIGV 180

Query: 643  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVIDGKLPINHEILCHLQD 822
            EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREI+ YLD+V+D KLP+NHEIL HLQD
Sbjct: 181  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDVVVDEKLPLNHEILYHLQD 240

Query: 823  VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 1002
            VFNLLPNLNVAELIKAF+VKTNDMMLVIYLSSL RSVIALHNLINNKMLNKEHEKAEDAK
Sbjct: 241  VFNLLPNLNVAELIKAFAVKTNDMMLVIYLSSLTRSVIALHNLINNKMLNKEHEKAEDAK 300

Query: 1003 PSAVPAASGS 1032
            P+AVPA +GS
Sbjct: 301  PAAVPAIAGS 310


>ref|XP_002312144.1| predicted protein [Populus trichocarpa] gi|222851964|gb|EEE89511.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  573 bits (1476), Expect = e-161
 Identities = 285/310 (91%), Positives = 303/310 (97%)
 Frame = +1

Query: 103  MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 282
            MDVIKTQQIS+RP+EKV+VHPLVLLSIVDNYNRVA+DTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1    MDVIKTQQISARPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60

Query: 283  YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 462
            YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDL IH LF+
Sbjct: 61   YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLKIHGLFN 120

Query: 463  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 642
            DYVPNPVLVIIDVQP+ELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAH+VEEIGV
Sbjct: 121  DYVPNPVLVIIDVQPEELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHDVEEIGV 180

Query: 643  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVIDGKLPINHEILCHLQD 822
            EHLLRDVKDTTISTLATEVTGKLAALKGLDARL+EI+ YLDLVI+GKLP+NHEIL HLQD
Sbjct: 181  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLKEIRGYLDLVIEGKLPLNHEILYHLQD 240

Query: 823  VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 1002
            VFNLLPNLNVA+LIKAF+VKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAED+K
Sbjct: 241  VFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDSK 300

Query: 1003 PSAVPAASGS 1032
            P A+P  +GS
Sbjct: 301  PVALPPVAGS 310


>gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase subunit 8 [Elaeis
            guineensis]
          Length = 310

 Score =  572 bits (1475), Expect = e-161
 Identities = 283/310 (91%), Positives = 302/310 (97%)
 Frame = +1

Query: 103  MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 282
            MDV+K QQIS R +EKV+VHPLVLLSIVDNYNRVARD+RKRV+GVLLGSSF+GTVDVTNS
Sbjct: 1    MDVVKAQQISGRAIEKVIVHPLVLLSIVDNYNRVARDSRKRVIGVLLGSSFRGTVDVTNS 60

Query: 283  YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 462
            YAVPFEE+EKDPSIWFLDHNYHESMF+MFKRINA+EHVVGWYSTGPKLRENDLDIH LF+
Sbjct: 61   YAVPFEEDEKDPSIWFLDHNYHESMFAMFKRINAREHVVGWYSTGPKLRENDLDIHALFN 120

Query: 463  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 642
            DYVPNPVLVIIDVQP ELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV
Sbjct: 121  DYVPNPVLVIIDVQPVELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 180

Query: 643  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVIDGKLPINHEILCHLQD 822
            EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREI+ YLDLVIDGKLP+NHEIL HLQD
Sbjct: 181  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDLVIDGKLPLNHEILYHLQD 240

Query: 823  VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 1002
            VFNLLPNLNV+EL+KAF+VKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAED+K
Sbjct: 241  VFNLLPNLNVSELVKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDSK 300

Query: 1003 PSAVPAASGS 1032
            P+ VP+A+GS
Sbjct: 301  PTVVPSAAGS 310


>ref|XP_003538451.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
            7-like [Glycine max]
          Length = 309

 Score =  570 bits (1469), Expect = e-160
 Identities = 285/308 (92%), Positives = 301/308 (97%)
 Frame = +1

Query: 103  MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 282
            MDVIKTQQISSRP+EKVVVHPLVLLSIVDNYNRVA+DTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1    MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60

Query: 283  YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 462
            YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIH LF+
Sbjct: 61   YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFN 120

Query: 463  DYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 642
            DYVPNPVLVIIDV+PKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV
Sbjct: 121  DYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 180

Query: 643  EHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVIDGKLPINHEILCHLQD 822
            EHLLRDVKDTTISTLATEV+ KL ALKGLDARL+EI+SYLDLVIDGKLP+NHEIL HLQD
Sbjct: 181  EHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQD 240

Query: 823  VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAK 1002
            VFNLLPNLNVA+LIKAF+VKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHE+AED+K
Sbjct: 241  VFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSK 300

Query: 1003 PSAVPAAS 1026
               VP+A+
Sbjct: 301  TVTVPSAA 308


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