BLASTX nr result

ID: Coptis25_contig00003751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003751
         (2203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16269.3| unnamed protein product [Vitis vinifera]              192   4e-46
ref|XP_002282115.1| PREDICTED: uncharacterized protein LOC100253...   192   4e-46
ref|XP_002526349.1| oxidoreductase, putative [Ricinus communis] ...   182   2e-43
ref|XP_002326156.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-41
gb|AFK49358.1| unknown [Lotus japonicus]                              174   1e-40

>emb|CBI16269.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score =  192 bits (487), Expect = 4e-46
 Identities = 92/158 (58%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
 Frame = -2

Query: 1011 MSLKRLSSVLIPTSSFSTSHYS--FKIGHVLNKSRSFTDSDLLAYAKLTQDSNPLHFDSE 838
            M +KRL S  +P+S FS+S      K G +L ++R+F++ D+L YAK++ DSNPLHFDS+
Sbjct: 1    MLIKRLVSSFVPSSGFSSSGGPRILKTGDILRQTRTFSELDVLEYAKVSYDSNPLHFDSK 60

Query: 837  FAQRYGYNDRIVHGMLIAALFPQIIASHFPGAVYVSQSLQFKLPVYIGEEVVAEVKALNI 658
             AQ  G+  ++VHGML+AALFP+II+SHFPGA+YVSQSL FKLPVYIG+E+V+EV+A NI
Sbjct: 61   CAQNAGFEAQLVHGMLVAALFPRIISSHFPGAIYVSQSLNFKLPVYIGDEIVSEVQATNI 120

Query: 657  RPNKDRYLSKLSTKCYKNGELLCINGEAMALLPTLTMD 544
            + +K RY++K +TKC+KNG +L I+GEAMA+LPTL ++
Sbjct: 121  KESKKRYVTKFATKCFKNGGVLVIDGEAMAVLPTLAVE 158


>ref|XP_002282115.1| PREDICTED: uncharacterized protein LOC100253475 [Vitis vinifera]
          Length = 383

 Score =  192 bits (487), Expect = 4e-46
 Identities = 92/158 (58%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
 Frame = -2

Query: 1011 MSLKRLSSVLIPTSSFSTSHYS--FKIGHVLNKSRSFTDSDLLAYAKLTQDSNPLHFDSE 838
            M +KRL S  +P+S FS+S      K G +L ++R+F++ D+L YAK++ DSNPLHFDS+
Sbjct: 222  MLIKRLVSSFVPSSGFSSSGGPRILKTGDILRQTRTFSELDVLEYAKVSYDSNPLHFDSK 281

Query: 837  FAQRYGYNDRIVHGMLIAALFPQIIASHFPGAVYVSQSLQFKLPVYIGEEVVAEVKALNI 658
             AQ  G+  ++VHGML+AALFP+II+SHFPGA+YVSQSL FKLPVYIG+E+V+EV+A NI
Sbjct: 282  CAQNAGFEAQLVHGMLVAALFPRIISSHFPGAIYVSQSLNFKLPVYIGDEIVSEVQATNI 341

Query: 657  RPNKDRYLSKLSTKCYKNGELLCINGEAMALLPTLTMD 544
            + +K RY++K +TKC+KNG +L I+GEAMA+LPTL ++
Sbjct: 342  KESKKRYVTKFATKCFKNGGVLVIDGEAMAVLPTLAVE 379


>ref|XP_002526349.1| oxidoreductase, putative [Ricinus communis]
            gi|223534308|gb|EEF36020.1| oxidoreductase, putative
            [Ricinus communis]
          Length = 162

 Score =  182 bits (463), Expect = 2e-43
 Identities = 91/158 (57%), Positives = 121/158 (76%), Gaps = 2/158 (1%)
 Frame = -2

Query: 1011 MSLKRLSSVLIPTSS-FS-TSHYSFKIGHVLNKSRSFTDSDLLAYAKLTQDSNPLHFDSE 838
            M +K L S  +P +  FS T+    K G V+ ++R F++ D+  Y+K++ D NPLHFD E
Sbjct: 1    MFVKSLVSRTVPYARRFSWTAPTVLKTGDVIRQTRVFSNQDVTEYSKVSNDLNPLHFDDE 60

Query: 837  FAQRYGYNDRIVHGMLIAALFPQIIASHFPGAVYVSQSLQFKLPVYIGEEVVAEVKALNI 658
            FA+  G+ DRIVHGML+AALFP+IIASHFPGAVYVSQ L F+ PVYIG+E+V EV+A++I
Sbjct: 61   FARNAGFEDRIVHGMLVAALFPRIIASHFPGAVYVSQGLHFRSPVYIGDEIVGEVQAVSI 120

Query: 657  RPNKDRYLSKLSTKCYKNGELLCINGEAMALLPTLTMD 544
            R NK RY+ K STKC+KNGELL ++GEAMA+LP L ++
Sbjct: 121  RENKKRYIVKFSTKCFKNGELLVLDGEAMAILPNLAVE 158


>ref|XP_002326156.1| predicted protein [Populus trichocarpa] gi|222833349|gb|EEE71826.1|
            predicted protein [Populus trichocarpa]
          Length = 173

 Score =  176 bits (447), Expect = 2e-41
 Identities = 89/161 (55%), Positives = 117/161 (72%), Gaps = 5/161 (3%)
 Frame = -2

Query: 1011 MSLKRLSSVLIP-TSSFSTS----HYSFKIGHVLNKSRSFTDSDLLAYAKLTQDSNPLHF 847
            M ++ L S  +P T +FS +        K G  L ++R FT+ D+  Y+K + DSNPLHF
Sbjct: 7    MLIRSLVSSSVPCTRNFSGTAPPPRQVLKTGDTLRQTRIFTNEDVTEYSKASHDSNPLHF 66

Query: 846  DSEFAQRYGYNDRIVHGMLIAALFPQIIASHFPGAVYVSQSLQFKLPVYIGEEVVAEVKA 667
            DSEFA+  G+ DR+VHGML+AALFP+IIASHFPGAVYVSQSL +K PVY+G+ VV EV+A
Sbjct: 67   DSEFARNAGFEDRLVHGMLVAALFPRIIASHFPGAVYVSQSLHYKSPVYVGDAVVGEVQA 126

Query: 666  LNIRPNKDRYLSKLSTKCYKNGELLCINGEAMALLPTLTMD 544
             NIR NK RY+ K  T+C+KN +LL I+GEA+A+LP L  +
Sbjct: 127  TNIRENKSRYIVKFLTRCFKNDKLLVIDGEAVAILPNLAAE 167


>gb|AFK49358.1| unknown [Lotus japonicus]
          Length = 168

 Score =  174 bits (440), Expect = 1e-40
 Identities = 84/159 (52%), Positives = 116/159 (72%)
 Frame = -2

Query: 1020 IQEMSLKRLSSVLIPTSSFSTSHYSFKIGHVLNKSRSFTDSDLLAYAKLTQDSNPLHFDS 841
            I+ +   +L S+ +   S + +    K G VL K+R+FT+ D+L Y+K+T D NPLH DS
Sbjct: 3    IRSLVSSKLQSLSLRCFSSAATPQVLKPGDVLRKARAFTEEDVLHYSKVTHDLNPLHTDS 62

Query: 840  EFAQRYGYNDRIVHGMLIAALFPQIIASHFPGAVYVSQSLQFKLPVYIGEEVVAEVKALN 661
              AQ  G+   +VHGML+A+LFP II+SHFPGAVYVS+SL FK PVYIG++V+ EV+A N
Sbjct: 63   AAAQNVGFEGPLVHGMLVASLFPHIISSHFPGAVYVSRSLNFKFPVYIGDQVIGEVQATN 122

Query: 660  IRPNKDRYLSKLSTKCYKNGELLCINGEAMALLPTLTMD 544
            +R NK+RYL K  T+C K+ EL+ I GEA+A+LPTLT++
Sbjct: 123  LRANKNRYLVKFKTRCIKSDELVAIEGEAVAMLPTLTVE 161


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