BLASTX nr result
ID: Coptis25_contig00003742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00003742
(1584 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23698.3| unnamed protein product [Vitis vinifera] 314 4e-83
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257... 313 8e-83
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] 313 8e-83
ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop... 307 4e-81
ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263... 306 1e-80
>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 314 bits (805), Expect = 4e-83
Identities = 160/240 (66%), Positives = 181/240 (75%)
Frame = +1
Query: 19 MDSDQGKLFIGGISWDTNEDKLNEHFGKYGQVEQSVIMRDKISGRPRGFGFVVFADPSVL 198
MDSDQGKLFIGGISW+T+EDKL E+FG YG+V Q+V+MRDK +GRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 199 DRVLQDKHTIDGRTVEAKRAMSREEQQTTSRSXXXXXXXXXXXXXXXMKTKKIFVGGLPP 378
DRVLQ+KH IDGRTVEAKRA+SREEQQT+SR+ +KTKKIFVGGLPP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRA-GNFNSARNSGGGGNVKTKKIFVGGLPP 119
Query: 379 TLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHKTFHELNGKM 558
TL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+KTFH+LNGK
Sbjct: 120 TLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQ 179
Query: 559 VEVKRALPKDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNRYIQPQTAGSNF 738
VEVKRALPKDAN RM+SNRY+QPQ G F
Sbjct: 180 VEVKRALPKDAN---------PGGGSRYQGYGASGGNPTTYDGRMDSNRYMQPQNTGGGF 230
>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 313 bits (802), Expect = 8e-83
Identities = 160/243 (65%), Positives = 181/243 (74%), Gaps = 3/243 (1%)
Frame = +1
Query: 19 MDSDQGKLFIGGISWDTNEDKLNEHFGKYGQVEQSVIMRDKISGRPRGFGFVVFADPSVL 198
MDSDQGKLFIGGISW+T+EDKL E+FG YG+V Q+V+MRDK +GRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 199 DRVLQDKHTIDGRTVEAKRAMSREEQQTTSRSXXXXXXXXXXXXXXXMKTKKIFVGGLPP 378
DRVLQ+KH IDGRTVEAKRA+SREEQQT+SR+ +KTKKIFVGGLPP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRA-GNFNSARNSGGGGNVKTKKIFVGGLPP 119
Query: 379 TLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHKTFHELNGKM 558
TL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+KTFH+LNGK
Sbjct: 120 TLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQ 179
Query: 559 VEVKRALPKDAN---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNRYIQPQTAG 729
VEVKRALPKDAN RM+SNRY+QPQ G
Sbjct: 180 VEVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQNTG 239
Query: 730 SNF 738
F
Sbjct: 240 GGF 242
>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 313 bits (802), Expect = 8e-83
Identities = 160/243 (65%), Positives = 181/243 (74%), Gaps = 3/243 (1%)
Frame = +1
Query: 19 MDSDQGKLFIGGISWDTNEDKLNEHFGKYGQVEQSVIMRDKISGRPRGFGFVVFADPSVL 198
MDSDQGKLFIGGISW+T+EDKL E+FG YG+V Q+V+MRDK +GRPRGFGFVVFADPS+L
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 199 DRVLQDKHTIDGRTVEAKRAMSREEQQTTSRSXXXXXXXXXXXXXXXMKTKKIFVGGLPP 378
DRVLQ+KH IDGRTVEAKRA+SREEQQT+SR+ +KTKKIFVGGLPP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTSSRA-GNFNSARNSGGGGNVKTKKIFVGGLPP 119
Query: 379 TLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHKTFHELNGKM 558
TL+EEGFRQYFE +G VTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+KTFH+LNGK
Sbjct: 120 TLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQ 179
Query: 559 VEVKRALPKDAN---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNRYIQPQTAG 729
VEVKRALPKDAN RM+SNRY+QPQ G
Sbjct: 180 VEVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQNTG 239
Query: 730 SNF 738
F
Sbjct: 240 GGF 242
>ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 307 bits (787), Expect = 4e-81
Identities = 156/242 (64%), Positives = 177/242 (73%), Gaps = 2/242 (0%)
Frame = +1
Query: 19 MDSDQGKLFIGGISWDTNEDKLNEHFGKYGQVEQSVIMRDKISGRPRGFGFVVFADPSVL 198
MDSDQGKLFIGGISW+T+EDKL ++F YG+V +V+MRDKI+ RPRGFGFVVF+DPSVL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60
Query: 199 DRVLQDKHTIDGRTVEAKRAMSREEQQTTSRSXXXXXXXXXXXXXXXMKTKKIFVGGLPP 378
DRVLQDKHTIDG+TVEAKRA+SREEQQT +R+ M+TKKIFVGGLPP
Sbjct: 61 DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPP 120
Query: 379 TLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHKTFHELNGKM 558
TLTEEGF++YFE YG VTDVVVMYDQ T RPRGFGFISFDTE+AVDRVLHKTFH+LNGK
Sbjct: 121 TLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 180
Query: 559 VEVKRALPKDAN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNRYIQPQTAGS 732
VEVKRALPKDAN RM+SNRY+Q Q +
Sbjct: 181 VEVKRALPKDANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSG 240
Query: 733 NF 738
F
Sbjct: 241 GF 242
>ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 306 bits (783), Expect = 1e-80
Identities = 159/240 (66%), Positives = 173/240 (72%)
Frame = +1
Query: 19 MDSDQGKLFIGGISWDTNEDKLNEHFGKYGQVEQSVIMRDKISGRPRGFGFVVFADPSVL 198
MDSD+GKLF+GGI WDT E+KL E+F +YG V Q+VIMRDK +GRPRGFGFVVFADPSVL
Sbjct: 1 MDSDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVL 60
Query: 199 DRVLQDKHTIDGRTVEAKRAMSREEQQTTSRSXXXXXXXXXXXXXXXMKTKKIFVGGLPP 378
D VLQ+KHTIDGRTVEAKRA+SREEQ T SR KTKKIFVGGLP
Sbjct: 61 DAVLQEKHTIDGRTVEAKRALSREEQHT-SRPGNSNTGRSSSGMGGNFKTKKIFVGGLPS 119
Query: 379 TLTEEGFRQYFETYGSVTDVVVMYDQTTNRPRGFGFISFDTEDAVDRVLHKTFHELNGKM 558
TLTEEGFRQYFETYG VTDVVVMYDQ T RPRGFGFISFDTEDAVDRVLHKTFH+LNGK+
Sbjct: 120 TLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKL 179
Query: 559 VEVKRALPKDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMESNRYIQPQTAGSNF 738
VEVKRALPKDAN RM+ NR++ PQT G F
Sbjct: 180 VEVKRALPKDAN------PGGGGRSGGYQGYGASGANTSAYEGRMDGNRFMPPQTTGGGF 233