BLASTX nr result

ID: Coptis25_contig00003736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003736
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280527.1| PREDICTED: superoxide dismutase [Mn], mitoch...   393   e-107
gb|AEZ56249.1| manganese superoxide dismutase [Prunus persica] g...   389   e-106
gb|AFH08815.1| chloroplast Mn-superoxide dismutase 1C-a [Prunus ...   388   e-105
gb|AFH08811.1| chloroplast Mn-superoxide dismutase 1A-c [Prunus ...   387   e-105
sp|P11796.1|SODM_NICPL RecName: Full=Superoxide dismutase [Mn], ...   386   e-105

>ref|XP_002280527.1| PREDICTED: superoxide dismutase [Mn], mitochondrial [Vitis
           vinifera] gi|147839972|emb|CAN61687.1| hypothetical
           protein VITISV_024204 [Vitis vinifera]
          Length = 228

 Score =  393 bits (1010), Expect = e-107
 Identities = 188/234 (80%), Positives = 204/234 (87%)
 Frame = +2

Query: 29  MALRTIIVNRKLGLGFKRNLVGFNNQARRELQTCSLPDLGYDYGDLEPAISGEIMKIHHT 208
           MALRT+I  + LGLG   +      Q+ R LQT SLPDL YDYG LEPAISGEIMK+HH 
Sbjct: 1   MALRTLITRKSLGLGLGVS------QSVRGLQTVSLPDLPYDYGALEPAISGEIMKLHHQ 54

Query: 209 KHHQTYVANYNKALEQLDHAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVSEGG 388
           KHHQTY+ NYNKALEQL  A+ KGD+STVVKLQ AIKFNGGGHVNHSIFWKNL+PV EGG
Sbjct: 55  KHHQTYITNYNKALEQLHEAMEKGDSSTVVKLQGAIKFNGGGHVNHSIFWKNLTPVHEGG 114

Query: 389 GEPPHGSLGWAIDTHFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTANQDP 568
           GEPP GSLGWAIDTHFGS E LV K+NSEGAA+QGSGWVWLGLDKD KKLVVETTANQDP
Sbjct: 115 GEPPKGSLGWAIDTHFGSMEALVAKINSEGAAVQGSGWVWLGLDKDLKKLVVETTANQDP 174

Query: 569 LVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKECP 730
           LVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKN+WKVI+WKY++EVYEKECP
Sbjct: 175 LVTKGPNLVPLLGIDVWEHAYYLQYKNVRPDYLKNVWKVIDWKYASEVYEKECP 228


>gb|AEZ56249.1| manganese superoxide dismutase [Prunus persica]
           gi|383386091|gb|AFH08809.1| chloroplast Mn-superoxide
           dismutase 1A-a [Prunus persica]
           gi|383386093|gb|AFH08810.1| chloroplast Mn-superoxide
           dismutase 1A-b [Prunus persica]
           gi|383386097|gb|AFH08812.1| chloroplast Mn-superoxide
           dismutase 1A-d [Prunus persica]
           gi|383386099|gb|AFH08813.1| chloroplast Mn-superoxide
           dismutase 1B-a [Prunus persica]
           gi|383386101|gb|AFH08814.1| chloroplast Mn-superoxide
           dismutase 1B-b [Prunus persica]
           gi|383386105|gb|AFH08816.1| chloroplast Mn-superoxide
           dismutase 1B-c [Prunus persica]
           gi|383386107|gb|AFH08817.1| chloroplast Mn-superoxide
           dismutase 1B-d [Prunus persica]
          Length = 237

 Score =  389 bits (999), Expect = e-106
 Identities = 186/237 (78%), Positives = 206/237 (86%), Gaps = 3/237 (1%)
 Frame = +2

Query: 29  MALRTIIVNRKLGLGF--KRNLVGFNNQAR-RELQTCSLPDLGYDYGDLEPAISGEIMKI 199
           MALR+++  + LGLGF  K  ++   + A  R  QT SLPDL YDYG LEPAISGEIM++
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRGFQTFSLPDLPYDYGALEPAISGEIMQL 60

Query: 200 HHTKHHQTYVANYNKALEQLDHAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVS 379
           HH KHHQTYV NYNKALEQL  A+ KGDA+ VVKLQSAIKFNGGGHVNHSIFWKNL+PV 
Sbjct: 61  HHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWKNLTPVG 120

Query: 380 EGGGEPPHGSLGWAIDTHFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTAN 559
           +GGGEPPHGSLGWAIDT+FGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTAN
Sbjct: 121 QGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTAN 180

Query: 560 QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKECP 730
           QDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY++EVYEKE P
Sbjct: 181 QDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 237


>gb|AFH08815.1| chloroplast Mn-superoxide dismutase 1C-a [Prunus persica]
          Length = 237

 Score =  388 bits (996), Expect = e-105
 Identities = 185/237 (78%), Positives = 206/237 (86%), Gaps = 3/237 (1%)
 Frame = +2

Query: 29  MALRTIIVNRKLGLGF--KRNLVGFNNQAR-RELQTCSLPDLGYDYGDLEPAISGEIMKI 199
           MALR+++  + LGLGF  K  ++   + A  R  QT SLPDL YDYG LEPAISGEIM++
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRGFQTFSLPDLPYDYGALEPAISGEIMQL 60

Query: 200 HHTKHHQTYVANYNKALEQLDHAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVS 379
           HH KHHQTYV NYNKALEQL  A+ KGDA+ VVKLQSAIKFNGGGHVNHSIFW+NL+PV 
Sbjct: 61  HHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWRNLTPVG 120

Query: 380 EGGGEPPHGSLGWAIDTHFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTAN 559
           +GGGEPPHGSLGWAIDT+FGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTAN
Sbjct: 121 QGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTAN 180

Query: 560 QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKECP 730
           QDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKY++EVYEKE P
Sbjct: 181 QDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 237


>gb|AFH08811.1| chloroplast Mn-superoxide dismutase 1A-c [Prunus persica]
           gi|383386109|gb|AFH08818.1| chloroplast Mn-superoxide
           dismutase 1B-e [Prunus persica]
          Length = 237

 Score =  387 bits (995), Expect = e-105
 Identities = 185/237 (78%), Positives = 206/237 (86%), Gaps = 3/237 (1%)
 Frame = +2

Query: 29  MALRTIIVNRKLGLGF--KRNLVGFNNQAR-RELQTCSLPDLGYDYGDLEPAISGEIMKI 199
           MALR+++  + LGLGF  K  ++   + A  R  QT SLPDL YDYG LEPAISGEIM++
Sbjct: 1   MALRSLVARKSLGLGFQSKAKILAVGSTAHSRGFQTFSLPDLPYDYGALEPAISGEIMQL 60

Query: 200 HHTKHHQTYVANYNKALEQLDHAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVS 379
           HH KHHQTYV NYNKALEQL  A+ KGDA+ VVKLQSAIKFNGGGHVNHSIFWKNL+PV 
Sbjct: 61  HHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIKFNGGGHVNHSIFWKNLTPVG 120

Query: 380 EGGGEPPHGSLGWAIDTHFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTAN 559
           +GGGEPPHGSLGWAIDT+FGS E LVQK+N+EGAALQGSGWVWL LDK+ KKLVVETTAN
Sbjct: 121 QGGGEPPHGSLGWAIDTNFGSMEALVQKINAEGAALQGSGWVWLALDKELKKLVVETTAN 180

Query: 560 QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKECP 730
           QDPLVTKG +LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINW+Y++EVYEKE P
Sbjct: 181 QDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWEYASEVYEKESP 237


>sp|P11796.1|SODM_NICPL RecName: Full=Superoxide dismutase [Mn], mitochondrial; Flags:
           Precursor gi|19693|emb|CAA32643.1| unnamed protein
           product [Nicotiana plumbaginifolia]
          Length = 228

 Score =  386 bits (992), Expect = e-105
 Identities = 184/236 (77%), Positives = 205/236 (86%), Gaps = 2/236 (0%)
 Frame = +2

Query: 29  MALRTIIVNRKL--GLGFKRNLVGFNNQARRELQTCSLPDLGYDYGDLEPAISGEIMKIH 202
           MALRT++  R L  GLGF++ L G        LQT SLPDL YDYG LEPAISG+IM++H
Sbjct: 1   MALRTLVSRRTLATGLGFRQQLRG--------LQTFSLPDLPYDYGALEPAISGDIMQLH 52

Query: 203 HTKHHQTYVANYNKALEQLDHAVTKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLSPVSE 382
           H  HHQTYV NYNKALEQL  A++KGDA TV KL SAIKFNGGGH+NHSIFWKNL+PV E
Sbjct: 53  HQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVRE 112

Query: 383 GGGEPPHGSLGWAIDTHFGSFETLVQKMNSEGAALQGSGWVWLGLDKDAKKLVVETTANQ 562
           GGGEPP GSLGWAIDT+FGS E LVQKMN+EGAALQGSGWVWLG+DK+ K+LV+ETTANQ
Sbjct: 113 GGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQ 172

Query: 563 DPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYSNEVYEKECP 730
           DPLV+KGA+LVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKV+NWKY+NEVYEKECP
Sbjct: 173 DPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228


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