BLASTX nr result

ID: Coptis25_contig00003735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003735
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63475.1| hypothetical protein VITISV_016798 [Vitis vinifera]   172   8e-48
ref|XP_002275863.1| PREDICTED: universal stress protein A-like p...   171   1e-47
ref|XP_002515296.1| conserved hypothetical protein [Ricinus comm...   154   6e-42
emb|CBI36939.3| unnamed protein product [Vitis vinifera]              151   1e-41
ref|XP_002302760.1| predicted protein [Populus trichocarpa] gi|2...   152   8e-41

>emb|CAN63475.1| hypothetical protein VITISV_016798 [Vitis vinifera]
          Length = 171

 Score =  172 bits (435), Expect(2) = 8e-48
 Identities = 82/132 (62%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
 Frame = -2

Query: 771 KRRKIVVAVNESEESMYALSWCLTNINIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFG 595
           K ++IVVAV+ESEESMYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF 
Sbjct: 14  KEKRIVVAVDESEESMYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFA 73

Query: 594 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGSGDAKDKICEILEKLGADML 415
           +D++ A+EKYG +L +SVM RA+ +  D+ +I+ +EKKVG+GDAKD IC  +EKLGAD+L
Sbjct: 74  NDVVGAMEKYGWDLVNSVMARAEAVXKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADIL 133

Query: 414 VIGSHGYGSIKR 379
           V+GSH YG  KR
Sbjct: 134 VMGSHDYGFFKR 145



 Score = 45.4 bits (106), Expect(2) = 8e-48
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = -1

Query: 298 RALLGSVSDYCSKTAKCPVLIVKRP 224
           RALLGSVSD+C+K  KCPV++VKRP
Sbjct: 145 RALLGSVSDHCAKHVKCPVVVVKRP 169


>ref|XP_002275863.1| PREDICTED: universal stress protein A-like protein [Vitis vinifera]
          Length = 171

 Score =  171 bits (434), Expect(2) = 1e-47
 Identities = 82/132 (62%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
 Frame = -2

Query: 771 KRRKIVVAVNESEESMYALSWCLTNINIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFG 595
           K ++IVVAV+ESEESMYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF 
Sbjct: 14  KEKRIVVAVDESEESMYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFA 73

Query: 594 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGSGDAKDKICEILEKLGADML 415
           +D++ A+EKYG +L +SVM RA+ +  D+ +I+ +EKKVG+GDAKD IC  +EKLGAD+L
Sbjct: 74  NDVVGAMEKYGWDLVNSVMARAEAVYKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADIL 133

Query: 414 VIGSHGYGSIKR 379
           V+GSH YG  KR
Sbjct: 134 VMGSHDYGFFKR 145



 Score = 45.4 bits (106), Expect(2) = 1e-47
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = -1

Query: 298 RALLGSVSDYCSKTAKCPVLIVKRP 224
           RALLGSVSD+C+K  KCPV++VKRP
Sbjct: 145 RALLGSVSDHCAKHVKCPVVVVKRP 169


>ref|XP_002515296.1| conserved hypothetical protein [Ricinus communis]
           gi|223545776|gb|EEF47280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  154 bits (390), Expect(2) = 6e-42
 Identities = 77/132 (58%), Positives = 101/132 (76%)
 Frame = -2

Query: 774 VKRRKIVVAVNESEESMYALSWCLTNINIDLNSQYTLILLYIKPPPLVYSSLDITGYLFG 595
           +K RKI+VAV+ES+ESM ALSWCL N+ +  NS  TL+LLY+KPPP VYS+ D  GYLF 
Sbjct: 7   MKERKILVAVDESKESMTALSWCLKNL-VSPNSSSTLVLLYVKPPPPVYSAFDAAGYLFS 65

Query: 594 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGSGDAKDKICEILEKLGADML 415
            D+I+A+EKY K+L +SVM RA+ +  +  + ++IE+ VGSGDAKD IC  +EKL AD L
Sbjct: 66  GDVISAMEKYSKDLINSVMERAEAVYKNSISNVKIERVVGSGDAKDVICNSVEKLRADTL 125

Query: 414 VIGSHGYGSIKR 379
           V+GSH YG +KR
Sbjct: 126 VMGSHDYGFLKR 137



 Score = 43.1 bits (100), Expect(2) = 6e-42
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -1

Query: 298 RALLGSVSDYCSKTAKCPVLIVKRP 224
           R LLGSVSDYC++  KCPV+IVK P
Sbjct: 137 RTLLGSVSDYCARHVKCPVVIVKHP 161


>emb|CBI36939.3| unnamed protein product [Vitis vinifera]
          Length = 143

 Score =  151 bits (381), Expect(2) = 1e-41
 Identities = 71/117 (60%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
 Frame = -2

Query: 726 MYALSWCLTNINIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFGSDIIAAIEKYGKELA 550
           MYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF +D++ A+EKYG +L 
Sbjct: 1   MYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFANDVVGAMEKYGWDLV 60

Query: 549 DSVMGRAQVICNDYPNIIQIEKKVGSGDAKDKICEILEKLGADMLVIGSHGYGSIKR 379
           +SVM RA+ +  D+ +I+ +EKKVG+GDAKD IC  +EKLGAD+LV+GSH YG  KR
Sbjct: 61  NSVMARAEAVYKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADILVMGSHDYGFFKR 117



 Score = 45.4 bits (106), Expect(2) = 1e-41
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = -1

Query: 298 RALLGSVSDYCSKTAKCPVLIVKRP 224
           RALLGSVSD+C+K  KCPV++VKRP
Sbjct: 117 RALLGSVSDHCAKHVKCPVVVVKRP 141


>ref|XP_002302760.1| predicted protein [Populus trichocarpa] gi|222844486|gb|EEE82033.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  152 bits (383), Expect(2) = 8e-41
 Identities = 72/130 (55%), Positives = 101/130 (77%)
 Frame = -2

Query: 768 RRKIVVAVNESEESMYALSWCLTNINIDLNSQYTLILLYIKPPPLVYSSLDITGYLFGSD 589
           + KIVVAV+ESEESM+ALSWCL+N+ I  NS  TL+LLY+KP P +YSS DI  ++F +D
Sbjct: 9   KHKIVVAVDESEESMHALSWCLSNL-ISHNSTTTLVLLYVKPRPTIYSSFDIAEHIFSAD 67

Query: 588 IIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGSGDAKDKICEILEKLGADMLVI 409
           +I A+EKYG +L +SVM RA+ +  ++ + + +EK +GSG+A+D IC+ +EKL  D LV+
Sbjct: 68  VIVAMEKYGTDLVNSVMKRAETVFRNFNSNVNVEKVIGSGEAQDVICDTVEKLRPDTLVM 127

Query: 408 GSHGYGSIKR 379
           GSHGYG +KR
Sbjct: 128 GSHGYGFLKR 137



 Score = 42.0 bits (97), Expect(2) = 8e-41
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -1

Query: 298 RALLGSVSDYCSKTAKCPVLIVKRP 224
           RA+LGSVS++C+K  KCPV+IVK P
Sbjct: 137 RAILGSVSEHCAKRVKCPVVIVKHP 161


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