BLASTX nr result

ID: Coptis25_contig00003727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003727
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324552.1| ABC transporter family protein [Populus tric...   281   2e-73
gb|EEC78062.1| hypothetical protein OsI_17521 [Oryza sativa Indi...   280   3e-73
gb|EAZ32065.1| hypothetical protein OsJ_16253 [Oryza sativa Japo...   280   3e-73
emb|CAJ86362.1| OSIGBa0117N13.6 [Oryza sativa Indica Group] gi|1...   280   3e-73
ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis ...   278   1e-72

>ref|XP_002324552.1| ABC transporter family protein [Populus trichocarpa]
           gi|222865986|gb|EEF03117.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 229

 Score =  281 bits (718), Expect = 2e-73
 Identities = 139/178 (78%), Positives = 154/178 (86%)
 Frame = -2

Query: 536 MSLRKAPLPRLLLNNVSCMRNAQTILRNINVSVHDGSALVLTGANGAGKSTFLRMLAGFS 357
           M LRKAPLPR+LL+NVSCMRNAQ ILR++NVSVHDG ALVLTG+NG+GKSTFLRMLAGFS
Sbjct: 1   MLLRKAPLPRILLDNVSCMRNAQQILRHVNVSVHDGGALVLTGSNGSGKSTFLRMLAGFS 60

Query: 356 RPSAGEILWNGHDITQSGVFQQYKLQLNWLSLKDAIKDKLTVLDNVQWFELLEGKSGKAR 177
           +PSAG+ILWNGHD+T+SGVF QYKLQLNWLSLKDAIK+K TVLDNVQWFELLEGK G + 
Sbjct: 61  KPSAGQILWNGHDVTESGVFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFELLEGKQGNSL 120

Query: 176 DSLELMGLGRLINEKARMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDADGTRLLE 3
            ++ELMGLGRL  +KARMLSMG           AIDRPIWLLDEPSVALD DG RLLE
Sbjct: 121 PAIELMGLGRLAKDKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVRLLE 178


>gb|EEC78062.1| hypothetical protein OsI_17521 [Oryza sativa Indica Group]
          Length = 224

 Score =  280 bits (717), Expect = 3e-73
 Identities = 139/178 (78%), Positives = 155/178 (87%)
 Frame = -2

Query: 536 MSLRKAPLPRLLLNNVSCMRNAQTILRNINVSVHDGSALVLTGANGAGKSTFLRMLAGFS 357
           M+  K P PRLLLN VSCMRNAQ +LR+INVSVHDG+ALVLTGANG+GKSTFLRMLAGFS
Sbjct: 1   MAPLKPPPPRLLLNGVSCMRNAQAVLRDINVSVHDGTALVLTGANGSGKSTFLRMLAGFS 60

Query: 356 RPSAGEILWNGHDITQSGVFQQYKLQLNWLSLKDAIKDKLTVLDNVQWFELLEGKSGKAR 177
           RPSAGE+LWNGHDIT  GVFQQYKLQLNW+SLKDA+K+KLTVL+NVQWFELLEGK GK+ 
Sbjct: 61  RPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVKEKLTVLENVQWFELLEGKHGKSA 120

Query: 176 DSLELMGLGRLINEKARMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDADGTRLLE 3
            ++ELMGLGRL+NEKARMLSMG           AIDRPIWLLDEPSVALDA+G +LLE
Sbjct: 121 PAIELMGLGRLMNEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVKLLE 178


>gb|EAZ32065.1| hypothetical protein OsJ_16253 [Oryza sativa Japonica Group]
          Length = 313

 Score =  280 bits (717), Expect = 3e-73
 Identities = 139/178 (78%), Positives = 155/178 (87%)
 Frame = -2

Query: 536 MSLRKAPLPRLLLNNVSCMRNAQTILRNINVSVHDGSALVLTGANGAGKSTFLRMLAGFS 357
           M+  K P PRLLLN VSCMRNAQ +LR+INVSVHDG+ALVLTGANG+GKSTFLRMLAGFS
Sbjct: 1   MAPLKPPPPRLLLNGVSCMRNAQAVLRDINVSVHDGTALVLTGANGSGKSTFLRMLAGFS 60

Query: 356 RPSAGEILWNGHDITQSGVFQQYKLQLNWLSLKDAIKDKLTVLDNVQWFELLEGKSGKAR 177
           RPSAGE+LWNGHDIT  GVFQQYKLQLNW+SLKDA+K+KLTVL+NVQWFELLEGK GK+ 
Sbjct: 61  RPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVKEKLTVLENVQWFELLEGKHGKSA 120

Query: 176 DSLELMGLGRLINEKARMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDADGTRLLE 3
            ++ELMGLGRL+NEKARMLSMG           AIDRPIWLLDEPSVALDA+G +LLE
Sbjct: 121 PAIELMGLGRLMNEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVKLLE 178


>emb|CAJ86362.1| OSIGBa0117N13.6 [Oryza sativa Indica Group]
           gi|116312048|emb|CAJ86412.1| H0303G06.1 [Oryza sativa
           Indica Group]
          Length = 313

 Score =  280 bits (717), Expect = 3e-73
 Identities = 139/178 (78%), Positives = 155/178 (87%)
 Frame = -2

Query: 536 MSLRKAPLPRLLLNNVSCMRNAQTILRNINVSVHDGSALVLTGANGAGKSTFLRMLAGFS 357
           M+  K P PRLLLN VSCMRNAQ +LR+INVSVHDG+ALVLTGANG+GKSTFLRMLAGFS
Sbjct: 1   MAPLKPPPPRLLLNGVSCMRNAQAVLRDINVSVHDGTALVLTGANGSGKSTFLRMLAGFS 60

Query: 356 RPSAGEILWNGHDITQSGVFQQYKLQLNWLSLKDAIKDKLTVLDNVQWFELLEGKSGKAR 177
           RPSAGE+LWNGHDIT  GVFQQYKLQLNW+SLKDA+K+KLTVL+NVQWFELLEGK GK+ 
Sbjct: 61  RPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVKEKLTVLENVQWFELLEGKHGKSA 120

Query: 176 DSLELMGLGRLINEKARMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDADGTRLLE 3
            ++ELMGLGRL+NEKARMLSMG           AIDRPIWLLDEPSVALDA+G +LLE
Sbjct: 121 PAIELMGLGRLMNEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVKLLE 178


>ref|NP_176516.1| ABC transporter I family member 1 [Arabidopsis thaliana]
           gi|47605542|sp|Q9C8T1.1|AB1I_ARATH RecName: Full=ABC
           transporter I family member 1; Short=ABC transporter
           ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c
           biogenesis ATP-binding export protein ccmA-like;
           AltName: Full=MRP-related protein 3; AltName:
           Full=Putative non-intrinsic ABC protein 10
           gi|12324363|gb|AAG52155.1|AC022355_16 hypothetical
           protein; 38474-39163 [Arabidopsis thaliana]
           gi|332195959|gb|AEE34080.1| ABC transporter I family
           member 1 [Arabidopsis thaliana]
          Length = 229

 Score =  278 bits (712), Expect = 1e-72
 Identities = 137/178 (76%), Positives = 154/178 (86%)
 Frame = -2

Query: 536 MSLRKAPLPRLLLNNVSCMRNAQTILRNINVSVHDGSALVLTGANGAGKSTFLRMLAGFS 357
           MS+R+  +PRLLL NVSCMRNAQ ILR++NVS+HDG ALVLTG NG+GKSTFLRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 356 RPSAGEILWNGHDITQSGVFQQYKLQLNWLSLKDAIKDKLTVLDNVQWFELLEGKSGKAR 177
           +PSAGEILWNGHDITQSG+FQQYKLQLNW+SLKDAIK++ TVLDNVQWFELLE K GKA+
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 176 DSLELMGLGRLINEKARMLSMGXXXXXXXXXXXAIDRPIWLLDEPSVALDADGTRLLE 3
            +LELMGLGRL+ EK+RMLSMG           AIDRPIWLLDEPSVALD +G RLLE
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLE 178


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