BLASTX nr result

ID: Coptis25_contig00003697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003697
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519206.1| PREDICTED: uncharacterized protein LOC100815...    82   8e-14
gb|ACU19406.1| unknown [Glycine max]                                   82   8e-14
ref|XP_002285628.1| PREDICTED: uncharacterized protein LOC100243...    82   8e-14
ref|XP_002881598.1| hypothetical protein ARALYDRAFT_482856 [Arab...    75   8e-12
ref|NP_565890.1| uncharacterized protein [Arabidopsis thaliana] ...    74   2e-11

>ref|XP_003519206.1| PREDICTED: uncharacterized protein LOC100815148 [Glycine max]
          Length = 90

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 45/91 (49%), Positives = 60/91 (65%)
 Frame = -2

Query: 448 LNKVSSPSPTTNSRNEENTQESSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTA 269
           +  + S S TT S +++     +S +SR+RK CL +A SLQ+GFR+VKA FVGQ K +TA
Sbjct: 1   MGDMDSSSSTTLSNHKK-----TSSVSRLRKGCLSFAASLQKGFRYVKAFFVGQVKTITA 55

Query: 268 KNEKEASEADLQTAKMQVXXXXXXXXTKKRL 176
           +NEKEASEA+L+  KMQV         K RL
Sbjct: 56  RNEKEASEAELEATKMQVEATDAAEDIKNRL 86


>gb|ACU19406.1| unknown [Glycine max]
          Length = 90

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 47/94 (50%), Positives = 62/94 (65%)
 Frame = -2

Query: 457 MSDLNKVSSPSPTTNSRNEENTQESSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKK 278
           M D++  SS S T ++R +      +S +SR+RK CL +A SLQ+GFR+VKA FVGQ K 
Sbjct: 1   MGDMD--SSSSTTLSNRKK------TSSVSRLRKGCLSFAASLQKGFRYVKAFFVGQVKT 52

Query: 277 VTAKNEKEASEADLQTAKMQVXXXXXXXXTKKRL 176
           +TA+NEKEASEA+L+  KMQV         K RL
Sbjct: 53  ITARNEKEASEAELEATKMQVEATDAAEDIKNRL 86


>ref|XP_002285628.1| PREDICTED: uncharacterized protein LOC100243668 [Vitis vinifera]
           gi|302142094|emb|CBI19297.3| unnamed protein product
           [Vitis vinifera]
          Length = 87

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = -2

Query: 424 PTTNSRNEENTQESSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASE 245
           PTT  R+E+ T    S+ SR++++C+ +  SLQEGFR+ KA  VGQ KK+TA+NEKEA++
Sbjct: 5   PTTTKRSEQQT----SVTSRVKRDCISFFVSLQEGFRYFKALLVGQGKKMTARNEKEATQ 60

Query: 244 ADLQTAKMQVXXXXXXXXTKKRL 176
           ADL T KMQV        TKK L
Sbjct: 61  ADLLTEKMQVEAADAAEDTKKNL 83


>ref|XP_002881598.1| hypothetical protein ARALYDRAFT_482856 [Arabidopsis lyrata subsp.
           lyrata] gi|297327437|gb|EFH57857.1| hypothetical protein
           ARALYDRAFT_482856 [Arabidopsis lyrata subsp. lyrata]
          Length = 84

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 40/76 (52%), Positives = 48/76 (63%)
 Frame = -2

Query: 403 EENTQESSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASEADLQTAK 224
           E + + S SL  R++  CL  A S QEGF +VKA FVGQ K++TAKNEKEA+EA L   K
Sbjct: 5   ETSQRPSKSLTDRVKTNCLSMAVSCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETK 64

Query: 223 MQVXXXXXXXXTKKRL 176
           MQV         KKRL
Sbjct: 65  MQVDATDEAENAKKRL 80


>ref|NP_565890.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197247|gb|AAM14995.1| Expressed protein
           [Arabidopsis thaliana] gi|21537212|gb|AAM61553.1|
           unknown [Arabidopsis thaliana]
           gi|62318644|dbj|BAD95112.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254446|gb|AEC09540.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 84

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/76 (51%), Positives = 48/76 (63%)
 Frame = -2

Query: 403 EENTQESSSLLSRIRKECLYYATSLQEGFRHVKASFVGQAKKVTAKNEKEASEADLQTAK 224
           E + Q + SL  R++  CL  A + QEGF +VKA FVGQ K++TAKNEKEA+EA L   K
Sbjct: 5   ETSRQPAKSLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETK 64

Query: 223 MQVXXXXXXXXTKKRL 176
           MQV         KKRL
Sbjct: 65  MQVDATDEAENAKKRL 80


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