BLASTX nr result

ID: Coptis25_contig00003696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003696
         (2007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytopla...   795   0.0  
ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus ...   788   0.0  
ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasm...   778   0.0  
ref|XP_003544559.1| PREDICTED: aspartyl-tRNA synthetase, cytopla...   776   0.0  
ref|XP_003550250.1| PREDICTED: aspartyl-tRNA synthetase, cytopla...   775   0.0  

>ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Vitis vinifera]
          Length = 544

 Score =  795 bits (2054), Expect = 0.0
 Identities = 398/490 (81%), Positives = 438/490 (89%), Gaps = 6/490 (1%)
 Frame = +1

Query: 190  TEDPLSTNYGDISLPDM------GKKWTPVGSLNEELNNQEVLIRGRVQATRPVGKNISF 351
            T DPL++NYGD+ L D+      G KWT +G+L E+L +Q+VLIRGR Q  R VGKNI+F
Sbjct: 57   TPDPLASNYGDVPLLDLQSKEVTGLKWTDIGALTEDLKDQKVLIRGRAQTIRAVGKNIAF 116

Query: 352  IVLRGRMGFTVQCVLTVADGVVSRQMVKFASGLNKESFVDVVGIVSVPSQPIKGATQQVE 531
            +V+R +MGFTVQCVLTVA  +VSR MVK+A+GL++ES VD+ GI+SVP  PIKGATQQVE
Sbjct: 117  LVVR-QMGFTVQCVLTVAPDLVSRHMVKYATGLSRESHVDIEGIISVPGVPIKGATQQVE 175

Query: 532  VQVRKIYCINKSVSNLPINIEDAARSEVDIENALQAGEQLVRVNQDTRLNYRVLDIRTPA 711
            VQVRK+Y I+K+  NLPINIEDAARSE +IE ALQAGEQLVRVNQDTRLNYRVLD+RTPA
Sbjct: 176  VQVRKLYGISKA-ENLPINIEDAARSESEIEKALQAGEQLVRVNQDTRLNYRVLDLRTPA 234

Query: 712  NQGIFRVQSQVGNIFRQFLLSKEFVEIHTPKLIAGSSEGGSAVFRLDYKGQPACLAQSPQ 891
            NQ IFRVQ QV NIFRQFLLS+ FV IHTPKLI GSSEGGSAVFRLDYKGQPACLAQSPQ
Sbjct: 235  NQAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFRLDYKGQPACLAQSPQ 294

Query: 892  LHKQMAICGDFNRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIDEHYSEVMDIVDALFV 1071
            LHKQMAICGDF RVFE+GPVFRAEDSFTHRHLCEFTGLDVEMEI EHY EVMDIVD LFV
Sbjct: 295  LHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMDIVDRLFV 354

Query: 1072 EIFDSLNEKCETDLEAIRKQYPFEPLKYLRRTLRLTFKEGVQMLKEAGVDVNPLGDLNTE 1251
             +FDSLNE C+ +LEAI +QYPFEPLKYLR+TLRL F+EGVQMLKE G++V+P GDLNTE
Sbjct: 355  AMFDSLNENCKKELEAIERQYPFEPLKYLRKTLRLPFQEGVQMLKEVGMEVDPYGDLNTE 414

Query: 1252 TERKLGQLVLEKYGTEFYILHQYPLAVRPFYTMPSYDDPAYSNSFDVFIRGEEIISGAQR 1431
             ERKLGQLVLEKYGTEFYILH+YPLAVRPFYTMPSYDDP YSNSFDVFIRGEEIISGAQR
Sbjct: 415  AERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPSYDDPLYSNSFDVFIRGEEIISGAQR 474

Query: 1432 VHVPEFLEARAKACNIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL 1611
            VHVP+FLE RA+AC IDVKTISTYID+FRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL
Sbjct: 475  VHVPDFLEKRAEACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL 534

Query: 1612 FPRDPLRIAP 1641
            FPRDP RIAP
Sbjct: 535  FPRDPTRIAP 544


>ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
            gi|223537278|gb|EEF38909.1| aspartyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 540

 Score =  788 bits (2036), Expect = 0.0
 Identities = 389/490 (79%), Positives = 435/490 (88%), Gaps = 7/490 (1%)
 Frame = +1

Query: 193  EDPLSTNYGDISLPDMGKK-------WTPVGSLNEELNNQEVLIRGRVQATRPVGKNISF 351
            EDPLS NYG+  L D+  K       WT VG LNEEL ++E+LIRGR Q TR VGKN++F
Sbjct: 52   EDPLSGNYGNTPLSDLQSKEESDLSEWTRVGQLNEELKDKELLIRGRAQTTRAVGKNMAF 111

Query: 352  IVLRGRMGFTVQCVLTVADGVVSRQMVKFASGLNKESFVDVVGIVSVPSQPIKGATQQVE 531
            +V+R + GFTVQCV+TV   +VSRQMVKF +GL++ES VDV G+VSVP+ PIKG TQQVE
Sbjct: 112  VVVRQK-GFTVQCVVTVQADLVSRQMVKFVAGLSRESIVDVRGVVSVPNSPIKGTTQQVE 170

Query: 532  VQVRKIYCINKSVSNLPINIEDAARSEVDIENALQAGEQLVRVNQDTRLNYRVLDIRTPA 711
            VQVRK+YCI+K++  LPINIEDAARSE +IE ALQ GEQ VRVNQDTRLNYRVLD+RTPA
Sbjct: 171  VQVRKLYCISKAIPTLPINIEDAARSEKEIEEALQRGEQFVRVNQDTRLNYRVLDMRTPA 230

Query: 712  NQGIFRVQSQVGNIFRQFLLSKEFVEIHTPKLIAGSSEGGSAVFRLDYKGQPACLAQSPQ 891
            NQGIFR+QS+VGNIFRQFLLS++F EIHTPKLIAGSSEGGSAVF+LDYKGQPACLAQSPQ
Sbjct: 231  NQGIFRIQSEVGNIFRQFLLSEDFDEIHTPKLIAGSSEGGSAVFKLDYKGQPACLAQSPQ 290

Query: 892  LHKQMAICGDFNRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIDEHYSEVMDIVDALFV 1071
            LHKQMAICGD  RVFEVGPVFRAEDS+THRHLCEF GLDVEMEI +HYSEVMDIVD LFV
Sbjct: 291  LHKQMAICGDKERVFEVGPVFRAEDSYTHRHLCEFVGLDVEMEIKKHYSEVMDIVDRLFV 350

Query: 1072 EIFDSLNEKCETDLEAIRKQYPFEPLKYLRRTLRLTFKEGVQMLKEAGVDVNPLGDLNTE 1251
            ++FD LNEKC+ +L+A+ +QYPFEPLKYLR+TLRL F+EG+QMLKEAGV+V+P GDLNTE
Sbjct: 351  KMFDYLNEKCKKELDAVCRQYPFEPLKYLRKTLRLRFEEGIQMLKEAGVEVDPYGDLNTE 410

Query: 1252 TERKLGQLVLEKYGTEFYILHQYPLAVRPFYTMPSYDDPAYSNSFDVFIRGEEIISGAQR 1431
             ERKLGQLVLEKYGTEFYILH+YPLAVRPFYTMP YDD  YSNSFDVFIRGEEIISGAQR
Sbjct: 411  AERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDDAKYSNSFDVFIRGEEIISGAQR 470

Query: 1432 VHVPEFLEARAKACNIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL 1611
            VHVPE LE RAKAC IDV TISTYID+FRYGAPPHGGFGVGLERV+MLFC LNNIRKTSL
Sbjct: 471  VHVPELLEERAKACGIDVSTISTYIDSFRYGAPPHGGFGVGLERVIMLFCGLNNIRKTSL 530

Query: 1612 FPRDPLRIAP 1641
            FPRDP+RIAP
Sbjct: 531  FPRDPMRIAP 540


>ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cucumis sativus]
          Length = 545

 Score =  778 bits (2008), Expect = 0.0
 Identities = 381/492 (77%), Positives = 431/492 (87%), Gaps = 7/492 (1%)
 Frame = +1

Query: 187  ITEDPLSTNYGDISLPDMGKK-------WTPVGSLNEELNNQEVLIRGRVQATRPVGKNI 345
            + +DPLS NYGD+ L D+  K       WT VGSL  EL ++ V++RGRVQ  R VGK +
Sbjct: 55   VEDDPLSANYGDVPLSDLQSKEVKSIENWTQVGSLTPELKDKYVILRGRVQTIRAVGKKM 114

Query: 346  SFIVLRGRMGFTVQCVLTVADGVVSRQMVKFASGLNKESFVDVVGIVSVPSQPIKGATQQ 525
            +F+V+R + GFTVQCVL+    +VSRQMVK+  GL++ES VDV G+VSVP+  IKGA+QQ
Sbjct: 115  AFLVVREK-GFTVQCVLSEQPELVSRQMVKYVDGLSRESIVDVEGVVSVPNVAIKGASQQ 173

Query: 526  VEVQVRKIYCINKSVSNLPINIEDAARSEVDIENALQAGEQLVRVNQDTRLNYRVLDIRT 705
            VE+QVRK+YCI+K++  LPINIEDAARSE +I+ ALQAGEQLVRVNQDTRLNYRVLD+RT
Sbjct: 174  VEIQVRKVYCISKAMPTLPINIEDAARSEAEIDKALQAGEQLVRVNQDTRLNYRVLDMRT 233

Query: 706  PANQGIFRVQSQVGNIFRQFLLSKEFVEIHTPKLIAGSSEGGSAVFRLDYKGQPACLAQS 885
            PANQGIFR+Q QV  +FRQFLL + FVEIHTPKLI GSSEGG++VFRLDYKGQPACLAQS
Sbjct: 234  PANQGIFRIQCQVSTMFRQFLLDENFVEIHTPKLIGGSSEGGASVFRLDYKGQPACLAQS 293

Query: 886  PQLHKQMAICGDFNRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIDEHYSEVMDIVDAL 1065
            PQLHKQMAICGDF RVFE+GPVFRAEDS+THRHLCEFTGLDVEMEI  HYSEVMDIVD L
Sbjct: 294  PQLHKQMAICGDFGRVFEIGPVFRAEDSYTHRHLCEFTGLDVEMEIKTHYSEVMDIVDRL 353

Query: 1066 FVEIFDSLNEKCETDLEAIRKQYPFEPLKYLRRTLRLTFKEGVQMLKEAGVDVNPLGDLN 1245
            FV +FDSLNEKC+  LEA+ KQYPFEPLKYLR+TLRLTF+EG+QMLK+AGV+++PLGDLN
Sbjct: 354  FVAMFDSLNEKCKKALEAVDKQYPFEPLKYLRKTLRLTFEEGIQMLKDAGVEIDPLGDLN 413

Query: 1246 TETERKLGQLVLEKYGTEFYILHQYPLAVRPFYTMPSYDDPAYSNSFDVFIRGEEIISGA 1425
            TE ERKLGQLVLEKYGTEFYILH+YPLAVRPFYTMP YD+P YSNSFDVFIRGEEIISGA
Sbjct: 414  TEAERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPTYSNSFDVFIRGEEIISGA 473

Query: 1426 QRVHVPEFLEARAKACNIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLFCALNNIRKT 1605
            QRVHVPEFL  RA+AC IDVKTI TYID+FRYGAPPHGGFGVGLERVVMLFC LNNIRKT
Sbjct: 474  QRVHVPEFLAERAQACGIDVKTIETYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKT 533

Query: 1606 SLFPRDPLRIAP 1641
            SLFPRDP RIAP
Sbjct: 534  SLFPRDPQRIAP 545


>ref|XP_003544559.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 543

 Score =  776 bits (2004), Expect = 0.0
 Identities = 381/490 (77%), Positives = 427/490 (87%), Gaps = 7/490 (1%)
 Frame = +1

Query: 193  EDPLSTNYGDISLPDMGKK-------WTPVGSLNEELNNQEVLIRGRVQATRPVGKNISF 351
            EDPL  NYGD+ L ++  K       WT V +L   L N+ VLIRGR QA RPVGK ++F
Sbjct: 55   EDPLGGNYGDVPLVELQSKTSADVGEWTRVEALGGALENRSVLIRGRAQAIRPVGKKMAF 114

Query: 352  IVLRGRMGFTVQCVLTVADGVVSRQMVKFASGLNKESFVDVVGIVSVPSQPIKGATQQVE 531
            +V+R   GFTVQC++      VS QMVKFA+ L++ES VDV G+VS+PS PIKGATQQVE
Sbjct: 115  LVIREN-GFTVQCLVQAQADTVSPQMVKFAAALSRESIVDVEGVVSIPSAPIKGATQQVE 173

Query: 532  VQVRKIYCINKSVSNLPINIEDAARSEVDIENALQAGEQLVRVNQDTRLNYRVLDIRTPA 711
            +QVRK+YC++++V  LPIN+EDAARSEV+IE ALQAGEQLVRVNQDTRLN+RVLD+RTPA
Sbjct: 174  IQVRKLYCVSRAVPTLPINLEDAARSEVEIETALQAGEQLVRVNQDTRLNFRVLDVRTPA 233

Query: 712  NQGIFRVQSQVGNIFRQFLLSKEFVEIHTPKLIAGSSEGGSAVFRLDYKGQPACLAQSPQ 891
            NQGIFR+QSQVGN FRQFLLS+ F EIHTPKLIAGSSEGG+AVFRLDYKGQPACLAQSPQ
Sbjct: 234  NQGIFRIQSQVGNAFRQFLLSEGFCEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQ 293

Query: 892  LHKQMAICGDFNRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIDEHYSEVMDIVDALFV 1071
            LHKQM+ICGDF RVFE+GPVFRAEDS+THRHLCEFTGLDVEMEI +HY EVMDIVD LFV
Sbjct: 294  LHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYFEVMDIVDRLFV 353

Query: 1072 EIFDSLNEKCETDLEAIRKQYPFEPLKYLRRTLRLTFKEGVQMLKEAGVDVNPLGDLNTE 1251
             +FDSLN+ C+ DLEA+  QYPFEPLKYLR TLRLT++EG+QMLK+ GV++ P GDLNTE
Sbjct: 354  AMFDSLNQNCKKDLEAVGSQYPFEPLKYLRTTLRLTYEEGIQMLKDVGVEIEPYGDLNTE 413

Query: 1252 TERKLGQLVLEKYGTEFYILHQYPLAVRPFYTMPSYDDPAYSNSFDVFIRGEEIISGAQR 1431
             ERKLGQLV EKYGTEFYILH+YPLAVRPFYTMP YD+PAYSNSFDVFIRGEEIISGAQR
Sbjct: 414  AERKLGQLVSEKYGTEFYILHRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQR 473

Query: 1432 VHVPEFLEARAKACNIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL 1611
            VHVPEFLE RA AC IDVKTISTYID+FRYGAPPHGGFGVGLERVVMLFC LNNIRKTSL
Sbjct: 474  VHVPEFLEQRAAACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSL 533

Query: 1612 FPRDPLRIAP 1641
            FPRDPLRIAP
Sbjct: 534  FPRDPLRIAP 543


>ref|XP_003550250.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 544

 Score =  775 bits (2002), Expect = 0.0
 Identities = 378/490 (77%), Positives = 428/490 (87%), Gaps = 7/490 (1%)
 Frame = +1

Query: 193  EDPLSTNYGDISLPDMGKK-------WTPVGSLNEELNNQEVLIRGRVQATRPVGKNISF 351
            EDPL  NYGD+ L ++  K       WT V +L   L N  VLIRGR QA RPVGK ++F
Sbjct: 56   EDPLGGNYGDVPLVELQSKTPSDVGEWTRVEALGGALENNSVLIRGRAQAIRPVGKKMAF 115

Query: 352  IVLRGRMGFTVQCVLTVADGVVSRQMVKFASGLNKESFVDVVGIVSVPSQPIKGATQQVE 531
            +V+R   GFTVQC++      VS QMVKFA+ L++ES VDV G+VSVP+ PIKGATQQVE
Sbjct: 116  LVIREN-GFTVQCLVQAQPDTVSAQMVKFAAALSRESIVDVEGVVSVPTAPIKGATQQVE 174

Query: 532  VQVRKIYCINKSVSNLPINIEDAARSEVDIENALQAGEQLVRVNQDTRLNYRVLDIRTPA 711
            +QVRK+YC++++V  LPIN+EDAARSEV+IE ALQAGEQLVRVNQDTRLN+RVLD+RTPA
Sbjct: 175  IQVRKLYCVSRAVPTLPINLEDAARSEVEIEKALQAGEQLVRVNQDTRLNFRVLDVRTPA 234

Query: 712  NQGIFRVQSQVGNIFRQFLLSKEFVEIHTPKLIAGSSEGGSAVFRLDYKGQPACLAQSPQ 891
            NQGIFR+QSQVGN FRQFL+S+ F EIHTPKLIAGSSEGG+AVFRLDYKGQPACLAQSPQ
Sbjct: 235  NQGIFRIQSQVGNAFRQFLVSQGFCEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQ 294

Query: 892  LHKQMAICGDFNRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIDEHYSEVMDIVDALFV 1071
            LHKQM+ICGDF RVFE+GPVFRAEDS+THRHLCEFTGLDVEMEI +HY EVMD+VD LFV
Sbjct: 295  LHKQMSICGDFGRVFEIGPVFRAEDSYTHRHLCEFTGLDVEMEIKKHYFEVMDLVDRLFV 354

Query: 1072 EIFDSLNEKCETDLEAIRKQYPFEPLKYLRRTLRLTFKEGVQMLKEAGVDVNPLGDLNTE 1251
             +FDSLN+ C+ DLEA+  QYPFEPLKYLR+TLRLT++EG+QMLK+ GV++ P GDLNTE
Sbjct: 355  AMFDSLNQNCKKDLEAVGSQYPFEPLKYLRKTLRLTYEEGIQMLKDVGVEIEPYGDLNTE 414

Query: 1252 TERKLGQLVLEKYGTEFYILHQYPLAVRPFYTMPSYDDPAYSNSFDVFIRGEEIISGAQR 1431
             ERKLGQLVLEKYGTEFYILH+YPLA+RPFYTMP YD+PAYSNSFDVFIRGEEIISGAQR
Sbjct: 415  AERKLGQLVLEKYGTEFYILHRYPLAIRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQR 474

Query: 1432 VHVPEFLEARAKACNIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSL 1611
            VHVPEFLE RA AC IDVKTIS+YID+FRYGAPPHGGFGVGLERVVMLFC LNNIRKTSL
Sbjct: 475  VHVPEFLEQRAAACGIDVKTISSYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSL 534

Query: 1612 FPRDPLRIAP 1641
            FPRDPLRIAP
Sbjct: 535  FPRDPLRIAP 544


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