BLASTX nr result

ID: Coptis25_contig00003693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003693
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   444   e-122
ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   442   e-122
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   441   e-121
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              441   e-121

>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
            gi|223551243|gb|EEF52729.1| hypothetical protein
            RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  444 bits (1141), Expect = e-122
 Identities = 229/340 (67%), Positives = 265/340 (77%), Gaps = 1/340 (0%)
 Frame = -3

Query: 1017 LIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK-Q 841
            LIEAL +K F  SQ+MALDA  SLSGRLT+SG+   EA LLK AG DQ YNAL+KAE  +
Sbjct: 910  LIEALHKKEFSNSQMMALDALVSLSGRLTSSGRYYLEAWLLKIAGYDQPYNALMKAEGLK 969

Query: 840  PHXXXXXXXXXXXENVARSWEKRAAFVLCNHENGSIFKALEECLKSNSLEMAKSCLVIAT 661
                         E  A SWE + AFVLCNHE GSIFK LEEC KSNS+EMAKSCLVI+T
Sbjct: 970  KGENDLAETMEDEEKAASSWETKVAFVLCNHEKGSIFKGLEECFKSNSIEMAKSCLVIST 1029

Query: 660  WLTHMLTNLPDTGVRDTARNCLLDQFINVLQSSRNLEEKALATVALRSFIDDQDALKELG 481
            WL +ML+ LPD GVR+ AR  LLD+FINVLQSSRN+EEK LA +AL++F+ D  AL+EL 
Sbjct: 1030 WLVYMLSVLPDIGVREVARKYLLDEFINVLQSSRNIEEKILAALALKTFVIDGAALEELE 1089

Query: 480  AYAKTICKSLRKLKRSSVVVTDILKALMNLTSINATELWSCAEVTEIDSGSNGEVLSLVH 301
             YAK I  +LRK KR+S V+ D+LK+LMNL S+NA +LW+C EV E++S SNGEVLSL+H
Sbjct: 1090 KYAKCIYTTLRKFKRTSPVIADVLKSLMNLASVNAVKLWNCTEVVELESSSNGEVLSLLH 1149

Query: 300  LKGRVFSSHSDGTIKVWDAGKRVLRLIQETREHKKAVTCLSIPSSGDKLYSGSLDRTIRV 121
            L+GRV SSHSDGTIKVWDAGKRVLRLIQE REH KAVTC+ +PS GDKLYSGSLD+TIRV
Sbjct: 1150 LRGRVISSHSDGTIKVWDAGKRVLRLIQEVREHTKAVTCICVPSFGDKLYSGSLDKTIRV 1209

Query: 120  WAIKSEEIHCTQVHEVKDAVHVLAANTSFACFASQGTGVK 1
            W IK EEIHC QVH+VK+AV  L AN   ACF SQGTGVK
Sbjct: 1210 WVIKPEEIHCVQVHDVKEAVFGLTANAKVACFTSQGTGVK 1249


>ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1|
            predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  443 bits (1139), Expect = e-122
 Identities = 232/345 (67%), Positives = 267/345 (77%), Gaps = 6/345 (1%)
 Frame = -3

Query: 1017 LIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEKQP 838
            LIEAL RK F  SQ+MALDA  SLS R T+SG    E  LLK AG DQ YNAL+K EK  
Sbjct: 970  LIEALHRKEFSNSQMMALDALGSLSARRTSSGDLYMETWLLKIAGFDQPYNALMKPEKLT 1029

Query: 837  HXXXXXXXXXXXENVA------RSWEKRAAFVLCNHENGSIFKALEECLKSNSLEMAKSC 676
                        E++        SWEKR AFVLCNHE GSIFKAL+EC KSNSLE AKSC
Sbjct: 1030 KNENDLAETNLAESMEDEERAESSWEKRVAFVLCNHEKGSIFKALQECFKSNSLETAKSC 1089

Query: 675  LVIATWLTHMLTNLPDTGVRDTARNCLLDQFINVLQSSRNLEEKALATVALRSFIDDQDA 496
            LVI+TWL +ML+ LPDTGV+  AR  LL++ INVLQSSRN+E+K L+T+ALR+F+ D  A
Sbjct: 1090 LVISTWLIYMLSVLPDTGVKSAARESLLEELINVLQSSRNMEDKILSTLALRTFVSDPAA 1149

Query: 495  LKELGAYAKTICKSLRKLKRSSVVVTDILKALMNLTSINATELWSCAEVTEIDSGSNGEV 316
            LK LG YAK I ++LRKLKRSS VVTD+LK+LM ++S+NATELW+C EV E+DS  NG++
Sbjct: 1150 LKALGKYAKCIYRTLRKLKRSSPVVTDVLKSLMKMSSVNATELWNCTEVVEVDSCVNGKL 1209

Query: 315  LSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLIQETREHKKAVTCLSIPSSGDKLYSGSLD 136
            LSL+HL+GRV SSHSDGTIKVWDAGKRVLRLIQE REH KAVTCL IPSSGDKLYSGSLD
Sbjct: 1210 LSLLHLEGRVISSHSDGTIKVWDAGKRVLRLIQEVREHTKAVTCLYIPSSGDKLYSGSLD 1269

Query: 135  RTIRVWAIKSEEIHCTQVHEVKDAVHVLAANTSFACFASQGTGVK 1
            +TIRVWAIK EEI C QVH+VK+AV+ LAAN   ACF SQG GVK
Sbjct: 1270 KTIRVWAIKPEEIRCIQVHDVKEAVYELAANDKVACFVSQGPGVK 1314


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  442 bits (1136), Expect = e-122
 Identities = 230/339 (67%), Positives = 268/339 (79%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1017 LIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK-Q 841
            L+EAL +K FP SQIMALDA  SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ +
Sbjct: 981  LVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSERLK 1040

Query: 840  PHXXXXXXXXXXXENVARSWEKRAAFVLCNHENGSIFKALEECLKSNSLEMAKSCLVIAT 661
             +           E    SW+KR  FVLCNHE GSIFKALEECLKSNSLE+AKSCLV+AT
Sbjct: 1041 IYENELTETTXEEEKAVTSWQKRVVFVLCNHEKGSIFKALEECLKSNSLEIAKSCLVVAT 1100

Query: 660  WLTHMLTNLPDTGVRDTARNCLLDQFINVLQSSRNLEEKALATVALRSFIDDQDALKELG 481
            WLT+ML NLPDTGVR+ A    L+ FINVLQSS+NLEEK LAT+AL  F++D  AL+ELG
Sbjct: 1101 WLTYMLYNLPDTGVRNVAHKSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELG 1160

Query: 480  AYAKTICKSLRKLKRSSVVVTDILKALMNLTSINATELWSCAEVTEIDSGSNGEVLSLVH 301
            AYAK + K+LRKLK++SVVV+D+LKAL+ L S++ TELW C EV E+DS SNG +LSL+ 
Sbjct: 1161 AYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLP 1220

Query: 300  LKGRVFSSHSDGTIKVWDAGKRVLRLIQETREHKKAVTCLSIPSSGDKLYSGSLDRTIRV 121
            LK  V S HSDGTIKVWDAGKR LRLIQE REH KAVTCL   SS DKLYSGSLD+TIRV
Sbjct: 1221 LKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRV 1280

Query: 120  WAIKSEEIHCTQVHEVKDAVHVLAANTSFACFASQGTGV 4
            W +K EEIHC QVH+VK+AV+ L AN +FACF+SQGTGV
Sbjct: 1281 WTVKPEEIHCVQVHDVKEAVYQLTANANFACFSSQGTGV 1319


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score =  441 bits (1134), Expect = e-121
 Identities = 229/339 (67%), Positives = 267/339 (78%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1017 LIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK-Q 841
            L+EAL +K FP SQIMALDA  SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ +
Sbjct: 981  LVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSERLK 1040

Query: 840  PHXXXXXXXXXXXENVARSWEKRAAFVLCNHENGSIFKALEECLKSNSLEMAKSCLVIAT 661
             +           E    SW+KR  FVLCNHE GSIFKALEECLKSNSLE+AKSCLV+AT
Sbjct: 1041 IYENELTETTEEEEKAVTSWQKRVVFVLCNHEKGSIFKALEECLKSNSLEIAKSCLVVAT 1100

Query: 660  WLTHMLTNLPDTGVRDTARNCLLDQFINVLQSSRNLEEKALATVALRSFIDDQDALKELG 481
            WLT+ML +LPDTGVR+ A    L+ FINVLQSS+NLEEK LAT+AL  F++D  AL+ELG
Sbjct: 1101 WLTYMLYHLPDTGVRNVAHKSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELG 1160

Query: 480  AYAKTICKSLRKLKRSSVVVTDILKALMNLTSINATELWSCAEVTEIDSGSNGEVLSLVH 301
            AYAK + K+LRKLK++SVVV+D+LKAL+ L S++ TELW C EV E+DS SNG +LSL+ 
Sbjct: 1161 AYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLP 1220

Query: 300  LKGRVFSSHSDGTIKVWDAGKRVLRLIQETREHKKAVTCLSIPSSGDKLYSGSLDRTIRV 121
            LK  V S HSDGTIKVWDAGKR LRLIQE REH KAVTCL   SS DKLYSGSLD+TIRV
Sbjct: 1221 LKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRV 1280

Query: 120  WAIKSEEIHCTQVHEVKDAVHVLAANTSFACFASQGTGV 4
            W +K EEIHC QVH+VK+AV+ L AN SFACF+SQGTGV
Sbjct: 1281 WTVKPEEIHCVQVHDVKEAVYQLTANASFACFSSQGTGV 1319


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  441 bits (1134), Expect = e-121
 Identities = 229/339 (67%), Positives = 267/339 (78%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1017 LIEALRRKAFPISQIMALDAFSSLSGRLTASGKSLTEARLLKSAGLDQSYNALLKAEK-Q 841
            L+EAL +K FP SQIMALDA  SLSG LT SGKS TEA LLK AG DQ Y+AL+K+E+ +
Sbjct: 997  LVEALHKKDFPHSQIMALDALLSLSGHLTTSGKSYTEAWLLKIAGYDQPYHALMKSERLK 1056

Query: 840  PHXXXXXXXXXXXENVARSWEKRAAFVLCNHENGSIFKALEECLKSNSLEMAKSCLVIAT 661
             +           E    SW+KR  FVLCNHE GSIFKALEECLKSNSLE+AKSCLV+AT
Sbjct: 1057 IYENELTETTEEEEKAVTSWQKRVVFVLCNHEKGSIFKALEECLKSNSLEIAKSCLVVAT 1116

Query: 660  WLTHMLTNLPDTGVRDTARNCLLDQFINVLQSSRNLEEKALATVALRSFIDDQDALKELG 481
            WLT+ML +LPDTGVR+ A    L+ FINVLQSS+NLEEK LAT+AL  F++D  AL+ELG
Sbjct: 1117 WLTYMLYHLPDTGVRNVAHKSFLEPFINVLQSSKNLEEKILATLALNCFLNDPGALEELG 1176

Query: 480  AYAKTICKSLRKLKRSSVVVTDILKALMNLTSINATELWSCAEVTEIDSGSNGEVLSLVH 301
            AYAK + K+LRKLK++SVVV+D+LKAL+ L S++ TELW C EV E+DS SNG +LSL+ 
Sbjct: 1177 AYAKCMYKTLRKLKKNSVVVSDMLKALIKLPSVDPTELWCCDEVVELDSCSNGGILSLLP 1236

Query: 300  LKGRVFSSHSDGTIKVWDAGKRVLRLIQETREHKKAVTCLSIPSSGDKLYSGSLDRTIRV 121
            LK  V S HSDGTIKVWDAGKR LRLIQE REH KAVTCL   SS DKLYSGSLD+TIRV
Sbjct: 1237 LKSWVLSGHSDGTIKVWDAGKRDLRLIQEVREHTKAVTCLYASSSSDKLYSGSLDKTIRV 1296

Query: 120  WAIKSEEIHCTQVHEVKDAVHVLAANTSFACFASQGTGV 4
            W +K EEIHC QVH+VK+AV+ L AN SFACF+SQGTGV
Sbjct: 1297 WTVKPEEIHCVQVHDVKEAVYQLTANASFACFSSQGTGV 1335


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